MGE detailed information
MGE type: IScluster/Tn MGE length: 25538 bp
Accession: NZ_CP083820 Location: 2813..28350 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: plasmid p13840_1
Accession: NZ_CP083820 Location: 2813..28350 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: plasmid p13840_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD41_RS22890 (LCD41_22940) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| LCD41_RS22895 (LCD41_22945) | 1709..2449 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| LCD41_RS22900 (LCD41_22950) | 2813..3781 | - | 969 | WP_023307223.1 | IS5 family transposase IS903B | Transposase |
| LCD41_RS22905 (LCD41_22955) | 4026..4229 | + | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| LCD41_RS22910 (LCD41_22960) | 4243..4473 | + | 231 | WP_023307222.1 | hypothetical protein | - |
| LCD41_RS22915 (LCD41_22965) | 4918..5184 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LCD41_RS22920 (LCD41_22970) | 5172..5654 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LCD41_RS22925 (LCD41_22975) | 5866..7209 | + | 1344 | WP_080339306.1 | ISNCY family transposase ISLad2 | Transposase |
| LCD41_RS22930 (LCD41_22980) | 7280..8098 | - | 819 | WP_023307220.1 | abortive infection family protein | - |
| LCD41_RS22935 (LCD41_22985) | 8107..8667 | - | 561 | WP_247170004.1 | Tn3 family transposase ISEc63 | Transposase |
| LCD41_RS22940 (LCD41_22990) | 8692..9396 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS22945 (LCD41_22995) | 9451..10643 | + | 1193 | Protein_11 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LCD41_RS22950 (LCD41_23000) | 10722..11726 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LCD41_RS22955 (LCD41_23005) | 12081..12359 | - | 279 | WP_247170005.1 | hypothetical protein | - |
| LCD41_RS22960 (LCD41_23010) | 12614..12970 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| LCD41_RS22965 (LCD41_23015) | 12960..13361 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| LCD41_RS22970 (LCD41_23020) | 13358..13648 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| LCD41_RS22975 (LCD41_23025) | 13704..14090 | - | 387 | Protein_17 | IS481 family transposase ISKpn28 | Transposase |
| LCD41_RS22980 (LCD41_23030) | 14145..14849 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS22985 (LCD41_23035) | 14903..15531 | - | 629 | Protein_19 | IS3 family transposase ISEc36 | Transposase |
| LCD41_RS22990 (LCD41_23040) | 16095..17714 | - | 1620 | WP_023332837.1 | Phosphoethanolamine transferase EptA | VF |
| LCD41_RS22995 (LCD41_23045) | 18081..19076 | - | 996 | WP_023332838.1 | tyrosine-type recombinase/integrase | - |
| LCD41_RS23000 (LCD41_23050) | 19283..19414 | + | 132 | Protein_22 | IS1 family transposase | - |
| LCD41_RS23005 (LCD41_23055) | 19561..19929 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| LCD41_RS23010 (LCD41_23060) | 20092..20676 | + | 585 | WP_008502231.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LCD41_RS23015 (LCD41_23065) | 20861..21418 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| LCD41_RS23020 (LCD41_23070) | 21560..22141 | + | 582 | WP_008502230.1 | HTH-type transcriptional repressor NemR | VF |
| LCD41_RS23025 (LCD41_23075) | 22146..22484 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| LCD41_RS23030 (LCD41_23080) | 22514..22843 | - | 330 | WP_008502229.1 | thioredoxin family protein | - |
| LCD41_RS23035 (LCD41_23085) | 23056..24162 | + | 1107 | WP_247170006.1 | alkene reductase | - |
| LCD41_RS23040 (LCD41_23090) | 24228..24929 | + | 702 | WP_008502228.1 | DsbA family oxidoreductase | - |
| LCD41_RS23045 (LCD41_23095) | 25055..26023 | + | 969 | WP_247170007.1 | IS5 family transposase IS903B | Transposase |
| LCD41_RS23050 (LCD41_23100) | 26374..26790 | - | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LCD41_RS23055 (LCD41_23105) | 26787..27017 | - | 231 | WP_023293777.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LCD41_RS23060 (LCD41_23110) | 27646..28350 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS23065 (LCD41_23115) | 28442..29077 | - | 636 | WP_000677445.1 | type 3 fimbria minor subunit MrkF | - |
| LCD41_RS23070 (LCD41_23120) | 29091..30086 | - | 996 | WP_134866775.1 | type 3 fimbria adhesin subunit MrkD | - |
| LCD41_RS23075 (LCD41_23125) | 30077..32563 | - | 2487 | WP_014106761.1 | type 3 fimbria usher protein MrkC | - |
| LCD41_RS23080 (LCD41_23130) | 32575..33276 | - | 702 | WP_000820818.1 | type 3 fimbria chaperone MrkB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|