MGE detailed information
MGE type: Conjugative plasmid MGE length: 94721 bp
Accession: NZ_CP083820 Location: 1..94721 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: plasmid p13840_1
Accession: NZ_CP083820 Location: 1..94721 Organism: Enterobacter roggenkampii strain 13840-yvys Replicon: plasmid p13840_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCD41_RS22890 (LCD41_22940) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| LCD41_RS22895 (LCD41_22945) | 1709..2449 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| LCD41_RS22900 (LCD41_22950) | 2813..3781 | - | 969 | WP_023307223.1 | IS5 family transposase IS903B | Transposase |
| LCD41_RS22905 (LCD41_22955) | 4026..4229 | + | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| LCD41_RS22910 (LCD41_22960) | 4243..4473 | + | 231 | WP_023307222.1 | hypothetical protein | - |
| LCD41_RS22915 (LCD41_22965) | 4918..5184 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LCD41_RS22920 (LCD41_22970) | 5172..5654 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LCD41_RS22925 (LCD41_22975) | 5866..7209 | + | 1344 | WP_080339306.1 | ISNCY family transposase ISLad2 | Transposase |
| LCD41_RS22930 (LCD41_22980) | 7280..8098 | - | 819 | WP_023307220.1 | abortive infection family protein | - |
| LCD41_RS22935 (LCD41_22985) | 8107..8667 | - | 561 | WP_247170004.1 | Tn3 family transposase ISEc63 | Transposase |
| LCD41_RS22940 (LCD41_22990) | 8692..9396 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS22945 (LCD41_22995) | 9451..10643 | + | 1193 | Protein_11 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LCD41_RS22950 (LCD41_23000) | 10722..11726 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| LCD41_RS22955 (LCD41_23005) | 12081..12359 | - | 279 | WP_247170005.1 | hypothetical protein | - |
| LCD41_RS22960 (LCD41_23010) | 12614..12970 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| LCD41_RS22965 (LCD41_23015) | 12960..13361 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| LCD41_RS22970 (LCD41_23020) | 13358..13648 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| LCD41_RS22975 (LCD41_23025) | 13704..14090 | - | 387 | Protein_17 | IS481 family transposase ISKpn28 | Transposase |
| LCD41_RS22980 (LCD41_23030) | 14145..14849 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS22985 (LCD41_23035) | 14903..15531 | - | 629 | Protein_19 | IS3 family transposase ISEc36 | Transposase |
| LCD41_RS22990 (LCD41_23040) | 16095..17714 | - | 1620 | WP_023332837.1 | Phosphoethanolamine transferase EptA | VF |
| LCD41_RS22995 (LCD41_23045) | 18081..19076 | - | 996 | WP_023332838.1 | tyrosine-type recombinase/integrase | - |
| LCD41_RS23000 (LCD41_23050) | 19283..19414 | + | 132 | Protein_22 | IS1 family transposase | - |
| LCD41_RS23005 (LCD41_23055) | 19561..19929 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| LCD41_RS23010 (LCD41_23060) | 20092..20676 | + | 585 | WP_008502231.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LCD41_RS23015 (LCD41_23065) | 20861..21418 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| LCD41_RS23020 (LCD41_23070) | 21560..22141 | + | 582 | WP_008502230.1 | HTH-type transcriptional repressor NemR | VF |
| LCD41_RS23025 (LCD41_23075) | 22146..22484 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| LCD41_RS23030 (LCD41_23080) | 22514..22843 | - | 330 | WP_008502229.1 | thioredoxin family protein | - |
| LCD41_RS23035 (LCD41_23085) | 23056..24162 | + | 1107 | WP_247170006.1 | alkene reductase | - |
| LCD41_RS23040 (LCD41_23090) | 24228..24929 | + | 702 | WP_008502228.1 | DsbA family oxidoreductase | - |
| LCD41_RS23045 (LCD41_23095) | 25055..26023 | + | 969 | WP_247170007.1 | IS5 family transposase IS903B | Transposase |
| LCD41_RS23050 (LCD41_23100) | 26374..26790 | - | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LCD41_RS23055 (LCD41_23105) | 26787..27017 | - | 231 | WP_023293777.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LCD41_RS23060 (LCD41_23110) | 27646..28350 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LCD41_RS23065 (LCD41_23115) | 28442..29077 | - | 636 | WP_000677445.1 | hypothetical protein | VF |
| LCD41_RS23070 (LCD41_23120) | 29091..30086 | - | 996 | WP_134866775.1 | Fimbria adhesin protein | VF |
| LCD41_RS23075 (LCD41_23125) | 30077..32563 | - | 2487 | WP_014106761.1 | Outer membrane usher protein HtrE | VF |
| LCD41_RS23080 (LCD41_23130) | 32575..33276 | - | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| LCD41_RS23085 (LCD41_23135) | 33372..33980 | - | 609 | WP_032676100.1 | hypothetical protein | VF |
| LCD41_RS23090 (LCD41_23140) | 34161..35129 | + | 969 | WP_247170008.1 | IS5 family transposase IS903B | Transposase |
| LCD41_RS23095 (LCD41_23145) | 35384..35812 | + | 429 | WP_001554382.1 | GFA family protein | - |
| LCD41_RS23100 (LCD41_23150) | 36962..37837 | - | 876 | WP_085952537.1 | incFII family plasmid replication initiator RepA | - |
| LCD41_RS23110 (LCD41_23165) | 38114..38392 | - | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| LCD41_RS23115 (LCD41_23170) | 38544..39089 | - | 546 | WP_008324931.1 | Phospholipase D | VF |
| LCD41_RS23120 (LCD41_23175) | 39237..40028 | - | 792 | WP_008324924.1 | DsbA family protein | - |
| LCD41_RS23125 (LCD41_23180) | 40021..40740 | - | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| LCD41_RS23130 (LCD41_23185) | 40807..41544 | - | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LCD41_RS23135 (LCD41_23190) | 41546..46786 | - | 5241 | WP_023307204.1 | Multifunctional conjugation protein TraI | Relaxase |
| LCD41_RS23140 (LCD41_23195) | 46786..49014 | - | 2229 | WP_106105154.1 | type IV conjugative transfer system coupling protein TraD | - |
| LCD41_RS23145 (LCD41_23200) | 49148..49822 | - | 675 | WP_008324909.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| LCD41_RS23150 (LCD41_23205) | 49897..50328 | - | 432 | WP_008324118.1 | entry exclusion protein | - |
| LCD41_RS23155 (LCD41_23210) | 50350..53172 | - | 2823 | WP_008324119.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LCD41_RS23160 (LCD41_23215) | 53172..54542 | - | 1371 | WP_008324121.1 | conjugal transfer pilus assembly protein TraH | - |
| LCD41_RS23165 (LCD41_23220) | 54529..54957 | - | 429 | WP_008324122.1 | hypothetical protein | - |
| LCD41_RS23170 (LCD41_23225) | 54950..55504 | - | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LCD41_RS23175 (LCD41_23230) | 55494..55742 | - | 249 | WP_008324126.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LCD41_RS23180 (LCD41_23235) | 55759..56508 | - | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LCD41_RS23185 (LCD41_23240) | 56539..56727 | - | 189 | WP_008324128.1 | conjugal transfer protein TrbE | - |
| LCD41_RS23190 (LCD41_23245) | 56759..58612 | - | 1854 | WP_022652255.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LCD41_RS23195 (LCD41_23250) | 58609..59238 | - | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LCD41_RS23200 (LCD41_23255) | 59255..60241 | - | 987 | WP_032160671.1 | conjugal transfer pilus assembly protein TraU | - |
| LCD41_RS23205 (LCD41_23260) | 60244..60891 | - | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| LCD41_RS23210 (LCD41_23265) | 60891..61238 | - | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| LCD41_RS23215 (LCD41_23270) | 61235..63865 | - | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| LCD41_RS23220 (LCD41_23275) | 63858..64424 | - | 567 | WP_008324135.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LCD41_RS23225 (LCD41_23280) | 64414..64815 | - | 402 | WP_008324137.1 | hypothetical protein | - |
| LCD41_RS23230 (LCD41_23285) | 64799..64984 | - | 186 | WP_008324139.1 | hypothetical protein | - |
| LCD41_RS23235 (LCD41_23290) | 64988..65212 | - | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| LCD41_RS23240 (LCD41_23295) | 65332..65871 | - | 540 | WP_008324154.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LCD41_RS23245 (LCD41_23300) | 65893..67287 | - | 1395 | WP_008324156.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LCD41_RS23250 (LCD41_23305) | 67274..68017 | - | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| LCD41_RS23255 (LCD41_23310) | 68004..68570 | - | 567 | WP_008324158.1 | type IV conjugative transfer system protein TraE | - |
| LCD41_RS23260 (LCD41_23315) | 68585..68890 | - | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| LCD41_RS23265 (LCD41_23320) | 69041..69391 | - | 351 | WP_008324162.1 | type IV conjugative transfer system pilin TraA | - |
| LCD41_RS23270 (LCD41_23325) | 69449..69673 | - | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| LCD41_RS23275 (LCD41_23330) | 69760..70449 | - | 690 | WP_008324166.1 | hypothetical protein | - |
| LCD41_RS23280 (LCD41_23335) | 70638..71030 | - | 393 | WP_008324167.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LCD41_RS23285 (LCD41_23340) | 71462..71938 | + | 477 | WP_008324168.1 | hypothetical protein | VF |
| LCD41_RS23290 (LCD41_23345) | 71985..72515 | - | 531 | WP_008324170.1 | antirestriction protein | - |
| LCD41_RS23295 (LCD41_23350) | 73142..73972 | - | 831 | WP_008324171.1 | N-6 DNA methylase | - |
| LCD41_RS23300 (LCD41_23355) | 74015..74278 | - | 264 | WP_008324174.1 | hypothetical protein | - |
| LCD41_RS23305 (LCD41_23360) | 74364..74708 | - | 345 | WP_008324177.1 | hypothetical protein | - |
| LCD41_RS23310 (LCD41_23365) | 74755..75042 | - | 288 | WP_008324178.1 | hypothetical protein | - |
| LCD41_RS23315 (LCD41_23370) | 75096..75470 | - | 375 | WP_008324180.1 | hypothetical protein | - |
| LCD41_RS23320 (LCD41_23375) | 76097..76456 | - | 360 | WP_047353151.1 | hypothetical protein | - |
| LCD41_RS23325 (LCD41_23380) | 76518..76841 | - | 324 | WP_047353152.1 | hypothetical protein | - |
| LCD41_RS23330 (LCD41_23385) | 76838..77566 | - | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| LCD41_RS23335 (LCD41_23390) | 77563..77994 | - | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| LCD41_RS23340 (LCD41_23395) | 78037..80046 | - | 2010 | WP_247170002.1 | ParB/RepB/Spo0J family partition protein | - |
| LCD41_RS23345 (LCD41_23400) | 80117..80347 | - | 231 | WP_008324190.1 | DUF905 domain-containing protein | - |
| LCD41_RS23350 (LCD41_23405) | 80632..80702 | + | 71 | Protein_91 | hypothetical protein | - |
| LCD41_RS23355 (LCD41_23410) | 80973..81289 | - | 317 | Protein_92 | hypothetical protein | - |
| LCD41_RS23360 (LCD41_23415) | 81324..81578 | - | 255 | WP_008324193.1 | DNA polymerase III subunit theta | - |
| LCD41_RS23365 (LCD41_23420) | 81771..81962 | - | 192 | WP_008324194.1 | hypothetical protein | - |
| LCD41_RS23370 (LCD41_23425) | 82005..82511 | - | 507 | WP_008324195.1 | antirestriction protein ArdA | - |
| LCD41_RS23375 (LCD41_23430) | 82910..83689 | - | 780 | WP_008324198.1 | hypothetical protein | - |
| LCD41_RS23380 (LCD41_23435) | 83743..84162 | - | 420 | WP_008324200.1 | DUF1380 family protein | - |
| LCD41_RS23385 (LCD41_23440) | 84146..84394 | - | 249 | WP_008324202.1 | hypothetical protein | - |
| LCD41_RS23390 (LCD41_23445) | 84394..85071 | - | 678 | WP_247170003.1 | DNA methylase | - |
| LCD41_RS23395 (LCD41_23450) | 85431..86102 | + | 672 | WP_008324206.1 | SOS response-associated peptidase family protein | - |
| LCD41_RS23400 (LCD41_23455) | 86282..86704 | + | 423 | WP_008324207.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LCD41_RS23405 (LCD41_23460) | 86704..86793 | + | 90 | Protein_102 | hypothetical protein | - |
| LCD41_RS23410 (LCD41_23465) | 86943..87923 | - | 981 | WP_023292560.1 | IS5 family transposase ISKpn26 | Transposase |
| LCD41_RS23415 (LCD41_23470) | 87964..88572 | - | 609 | WP_226860913.1 | tyrosine-type recombinase/integrase | - |
| LCD41_RS23420 (LCD41_23475) | 88634..89776 | + | 1143 | Protein_105 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LCD41_RS23425 (LCD41_23480) | 89855..90106 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| LCD41_RS23430 (LCD41_23485) | 90160..90465 | + | 306 | WP_008325193.1 | hypothetical protein | - |
| LCD41_RS23435 (LCD41_23490) | 91834..92805 | - | 972 | WP_004206785.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LCD41_RS23440 (LCD41_23495) | 92805..93971 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|