MGE detailed information
MGE type: Conjugative plasmid MGE length: 90907 bp
Accession: NZ_CP083514 Location: 1..90907 Organism: Escherichia coli strain elppa4 Replicon: plasmid unnamed2
Accession: NZ_CP083514 Location: 1..90907 Organism: Escherichia coli strain elppa4 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U07_RS25430 (50) | 50..484 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| K9U07_RS25435 (539) | 539..2497 | - | 1959 | WP_228587555.1 | ParB/RepB/Spo0J family partition protein | - |
| K9U07_RS25440 (2556) | 2556..2789 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| K9U07_RS25445 (2847) | 2847..3374 | - | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| K9U07_RS25450 (4145) | 4145..4336 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| K9U07_RS25455 (4333) | 4333..4755 | - | 423 | WP_000271741.1 | DUF1380 family protein | - |
| K9U07_RS25460 (4802) | 4802..5227 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| K9U07_RS25465 (5644) | 5644..6414 | - | 771 | WP_001434682.1 | hypothetical protein | - |
| K9U07_RS25470 (6465) | 6465..6931 | - | 467 | Protein_9 | DUF1380 family protein | - |
| K9U07_RS25475 (6912) | 6912..7133 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| K9U07_RS25480 (7134) | 7134..7817 | - | 684 | WP_030003447.1 | DNA methylase | - |
| K9U07_RS25485 (7893) | 7893..8204 | - | 312 | WP_134742675.1 | hypothetical protein | - |
| K9U07_RS25490 (8201) | 8201..9103 | - | 903 | WP_072748703.1 | DUF1281 domain-containing protein | - |
| K9U07_RS25495 (9521) | 9521..9769 | + | 249 | WP_000618105.1 | DinI-like family protein | - |
| K9U07_RS25500 (9766) | 9766..10203 | + | 438 | WP_089588324.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K9U07_RS25505 (10203) | 10203..11474 | + | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| K9U07_RS25510 (11479) | 11479..11871 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| K9U07_RS25515 (11876) | 11876..12847 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| K9U07_RS25520 (13076) | 13076..13720 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| K9U07_RS25525 (13714) | 13714..13989 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| K9U07_RS25530 (14127) | 14127..14919 | - | 793 | Protein_21 | site-specific integrase | - |
| K9U07_RS25535 (14916) | 14916..15422 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| K9U07_RS25540 (15413) | 15413..16117 | + | 705 | WP_001775011.1 | IS6 family transposase IS15DI | Transposase |
| K9U07_RS25545 (16506) | 16506..16931 | + | 426 | WP_024198578.1 | hypothetical protein | - |
| K9U07_RS25550 (16948) | 16948..17280 | + | 333 | WP_228587558.1 | toll/interleukin-1 receptor domain-containing protein | - |
| K9U07_RS25555 (17273) | 17273..17812 | + | 540 | WP_228587561.1 | hypothetical protein | - |
| K9U07_RS25560 (18055) | 18055..18495 | - | 441 | Protein_27 | ISNCY family transposase ISKpn21 | Transposase |
| K9U07_RS25565 (18564) | 18564..18842 | + | 279 | Protein_28 | IS6 family transposase IS15DII | Transposase |
| K9U07_RS25570 (18838) | 18838..19068 | - | 231 | Protein_29 | histidine phosphatase family protein | - |
| K9U07_RS25575 (19255) | 19255..20235 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| K9U07_RS25580 (20261) | 20261..20605 | + | 345 | WP_228587564.1 | hypothetical protein | - |
| K9U07_RS25585 (20781) | 20781..21383 | + | 603 | WP_097468803.1 | ProQ/FINO family protein | - |
| K9U07_RS25590 (21439) | 21439..21933 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| K9U07_RS25595 (21933) | 21933..22199 | + | 267 | WP_021576094.1 | hypothetical protein | - |
| K9U07_RS25600 (22469) | 22469..22672 | - | 204 | Protein_35 | hypothetical protein | - |
| K9U07_RS25605 (22778) | 22778..23053 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K9U07_RS25610 (23053) | 23053..23337 | - | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| K9U07_RS25615 (24243) | 24243..25274 | - | 1032 | WP_000907869.1 | plasmid replication initiator RepA | - |
| K9U07_RS25620 (26232) | 26232..26390 | + | 159 | Protein_39 | ash family protein | - |
| K9U07_RS25625 (26428) | 26428..26715 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| K9U07_RS25630 (27157) | 27157..27690 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| K9U07_RS25635 (27944) | 27944..28627 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| K9U07_RS25640 (28641) | 28641..29207 | + | 567 | WP_040028000.1 | protein TraD | - |
| K9U07_RS25645 (29475) | 29475..29729 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| K9U07_RS25650 (29772) | 29772..30224 | + | 453 | WP_228587567.1 | pili assembly chaperone | - |
| K9U07_RS25655 (30898) | 30898..31965 | + | 1068 | WP_228587570.1 | hypothetical protein | VF |
| K9U07_RS25660 (31965) | 31965..32402 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| K9U07_RS25665 (32416) | 32416..34098 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| K9U07_RS25670 (34091) | 34091..35386 | + | 1296 | WP_228587573.1 | type 4b pilus protein PilO2 | - |
| K9U07_RS25675 (35373) | 35373..35825 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| K9U07_RS25680 (35836) | 35836..37389 | + | 1554 | WP_001384241.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| K9U07_RS25685 (37402) | 37402..38499 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| K9U07_RS25690 (38517) | 38517..39131 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| K9U07_RS25695 (39141) | 39141..39701 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| K9U07_RS25700 (39686) | 39686..40342 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| K9U07_RS25705 (40342) | 40342..41634 | + | 1293 | WP_228587576.1 | hypothetical protein | VF |
| K9U07_RS25710 (41631) | 41631..41879 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| K9U07_RS25715 (43343) | 43343..44040 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| K9U07_RS25720 (44338) | 44338..46764 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| K9U07_RS25725 (46778) | 46778..47404 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| K9U07_RS25730 (47397) | 47397..48173 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| K9U07_RS25735 (48228) | 48228..48824 | + | 597 | WP_032203482.1 | molecular chaperone | - |
| K9U07_RS25740 (48854) | 48854..49351 | + | 498 | WP_228587549.1 | 4Fe-4S binding protein | - |
| K9U07_RS25745 (49810) | 49810..50790 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| K9U07_RS25750 (50976) | 50976..51560 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| K9U07_RS25755 (51955) | 51955..52413 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| K9U07_RS25760 (52410) | 52410..53228 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| K9U07_RS25765 (53225) | 53225..54373 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| K9U07_RS25770 (54370) | 54370..54660 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| K9U07_RS25775 (54675) | 54675..55226 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| K9U07_RS25780 (55316) | 55316..59083 | + | 3768 | WP_097463414.1 | DUF5710 domain-containing protein | - |
| K9U07_RS25785 (59101) | 59101..59448 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K9U07_RS25790 (59445) | 59445..60137 | + | 693 | WP_001611719.1 | DotI/IcmL family type IV secretion protein | - |
| K9U07_RS25795 (60148) | 60148..61131 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| K9U07_RS25800 (61134) | 61134..62423 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| K9U07_RS25805 (62423) | 62423..63127 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| K9U07_RS25810 (63127) | 63127..63654 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| K9U07_RS25815 (63705) | 63705..64109 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| K9U07_RS25820 (64173) | 64173..64361 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| K9U07_RS25825 (64345) | 64345..65145 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| K9U07_RS25830 (65235) | 65235..68279 | + | 3045 | WP_054192090.1 | IncI1-type conjugal transfer protein TraU | - |
| K9U07_RS25835 (68279) | 68279..68893 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| K9U07_RS25840 (68860) | 68860..70062 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| K9U07_RS25845 (70091) | 70091..70675 | + | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| K9U07_RS25850 (70772) | 70772..72940 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| K9U07_RS25855 (73014) | 73014..73664 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| K9U07_RS25860 (73736) | 73736..73945 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| K9U07_RS25865 (74337) | 74337..74513 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| K9U07_RS25870 (74578) | 74578..74810 | - | 233 | Protein_89 | hypothetical protein | - |
| K9U07_RS25875 (75172) | 75172..75423 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| K9U07_RS25880 (75495) | 75495..75647 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (75697) | 75697..75759 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75697) | 75697..75759 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75697) | 75697..75759 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75697) | 75697..75759 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| K9U07_RS25885 (75939) | 75939..77147 | + | 1209 | WP_024171190.1 | IncI1-type conjugal transfer protein TrbA | - |
| K9U07_RS25890 (77166) | 77166..78236 | + | 1071 | WP_137653290.1 | IncI1-type conjugal transfer protein TrbB | - |
| K9U07_RS25895 (78229) | 78229..80520 | + | 2292 | WP_228587552.1 | F-type conjugative transfer protein TrbC | - |
| K9U07_RS25900 (80557) | 80557..83256 | - | 2700 | WP_137653292.1 | Protein TraI | Relaxase |
| K9U07_RS25905 (83267) | 83267..83599 | - | 333 | WP_137653293.1 | plasmid mobilization protein MobA | - |
| K9U07_RS25910 (83832) | 83832..84167 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| K9U07_RS25915 (84253) | 84253..85101 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| K9U07_RS25920 (85681) | 85681..85932 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| K9U07_RS25925 (85963) | 85963..86196 | - | 234 | WP_162861452.1 | hypothetical protein | - |
| K9U07_RS25930 (86196) | 86196..87098 | - | 903 | WP_054170928.1 | Recombination-promoting nuclease RpnA | VF |
| K9U07_RS25935 (87163) | 87163..87429 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| K9U07_RS25940 (87522) | 87522..87956 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| K9U07_RS25945 (88685) | 88685..89185 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| K9U07_RS25950 (89648) | 89648..90244 | - | 597 | WP_000978012.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|