NZ_CP0835131..171115

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 171115 bp
Accession: NZ_CP083513        Location: 1..171115         Organism: Escherichia coli strain elppa4       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K9U07_RS24530 (298) 298..1199 + 902 Protein_0 DUF1281 domain-containing protein -
K9U07_RS24535 (1203) 1203..1508 + 306 WP_010891292.1 hypothetical protein -
K9U07_RS24540 (1585) 1585..2268 + 684 WP_000085939.1 DNA methylase -
K9U07_RS24545 (2269) 2269..2490 + 222 WP_001104870.1 hypothetical protein -
K9U07_RS24550 (2384) 2384..2938 + 555 WP_077248347.1 DUF1380 family protein -
K9U07_RS24555 (2984) 2984..3760 + 777 WP_001005035.1 hypothetical protein -
K9U07_RS24560 (4173) 4173..4598 + 426 WP_001198918.1 antirestriction protein -
K9U07_RS24565 (4645) 4645..5067 + 423 WP_000271685.1 DUF1380 family protein -
K9U07_RS24570 (5064) 5064..5255 + 192 WP_001027495.1 hypothetical protein -
K9U07_RS24575 (5225) 5225..5734 - 510 WP_071600123.1 hypothetical protein -
K9U07_RS24580 (6052) 6052..6591 + 540 WP_000290801.1 single-stranded DNA-binding protein -
K9U07_RS24585 (6648) 6648..6881 + 234 WP_000005990.1 DUF905 family protein -
K9U07_RS24590 (6947) 6947..8905 + 1959 WP_029487628.1 ParB/RepB/Spo0J family partition protein -
K9U07_RS24595 (8960) 8960..9394 + 435 WP_000845928.1 conjugation system SOS inhibitor PsiB -
K9U07_RS24600 (9391) 9391..10153 + 763 Protein_14 plasmid SOS inhibition protein A -
- (10122) 10122..10320 + 199 NuclAT_0 - Antitoxin Detail
- (10122) 10122..10320 + 199 NuclAT_0 - Antitoxin Detail
- (10122) 10122..10320 + 199 NuclAT_0 - Antitoxin Detail
- (10122) 10122..10320 + 199 NuclAT_0 - Antitoxin Detail
K9U07_RS24605 (10327) 10327..10476 + 150 Protein_15 DUF5431 family protein -
K9U07_RS24610 (10418) 10418..10543 + 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
K9U07_RS24615 (10844) 10844..11141 - 298 Protein_17 hypothetical protein -
K9U07_RS24620 (11211) 11211..11417 + 207 WP_000547965.1 hypothetical protein -
K9U07_RS24625 (11442) 11442..11729 + 288 WP_228587539.1 hypothetical protein -
K9U07_RS24630 (11848) 11848..12669 + 822 WP_001234475.1 DUF932 domain-containing protein -
K9U07_RS24635 (12966) 12966..13556 - 591 WP_228587542.1 hypothetical protein VF
K9U07_RS24640 (13908) 13908..14291 + 384 WP_072647915.1 conjugal transfer relaxosome DNA-binding protein TraM -
K9U07_RS24645 (14483) 14483..15130 + 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
K9U07_RS24650 (15266) 15266..15481 + 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
K9U07_RS24655 (15524) 15524..15889 + 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
K9U07_RS24660 (15904) 15904..16215 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
K9U07_RS24665 (16237) 16237..16803 + 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
K9U07_RS24670 (16790) 16790..17518 + 729 WP_001230813.1 type-F conjugative transfer system secretin TraK -
K9U07_RS24675 (17518) 17518..18945 + 1428 WP_000146684.1 F-type conjugal transfer pilus assembly protein TraB -
K9U07_RS24680 (18935) 18935..19525 + 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
K9U07_RS24685 (19512) 19512..19709 + 198 WP_024179215.1 conjugal transfer protein TrbD -
K9U07_RS24690 (19721) 19721..19972 + 252 WP_001038342.1 conjugal transfer protein TrbG -
K9U07_RS24695 (19969) 19969..20484 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
K9U07_RS24700 (20619) 20619..20840 + 222 WP_001278689.1 conjugal transfer protein TraR -
K9U07_RS24705 (21000) 21000..23627 + 2628 WP_001064245.1 type IV secretion system protein TraC -
K9U07_RS24710 (23624) 23624..24010 + 387 WP_000099691.1 type-F conjugative transfer system protein TrbI -
K9U07_RS24715 (24007) 24007..24639 + 633 WP_001203717.1 type-F conjugative transfer system protein TraW -
K9U07_RS24720 (24636) 24636..25628 + 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
K9U07_RS24725 (25637) 25637..26275 + 639 WP_000777695.1 type-F conjugative transfer system pilin assembly protein TrbC -
K9U07_RS24730 (26272) 26272..28080 + 1809 WP_000821838.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
K9U07_RS24735 (28107) 28107..28364 + 258 WP_000864318.1 conjugal transfer protein TrbE -
K9U07_RS24740 (28357) 28357..29100 + 744 WP_001030377.1 type-F conjugative transfer system pilin assembly protein TraF -
K9U07_RS24745 (29116) 29116..29463 + 348 WP_001287910.1 conjugal transfer protein TrbA -
K9U07_RS24750 (29465) 29465..29779 - 315 WP_001324103.1 hypothetical protein -
K9U07_RS24755 (29860) 29860..30144 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
K9U07_RS24760 (30131) 30131..30676 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
K9U07_RS24765 (30606) 30606..30947 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
K9U07_RS24770 (30934) 30934..31314 + 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
K9U07_RS24775 (31314) 31314..32687 + 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
K9U07_RS24780 (32684) 32684..35506 + 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
K9U07_RS24785 (35522) 35522..36019 + 498 WP_000605857.1 entry exclusion protein -
K9U07_RS24790 (36051) 36051..36782 + 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
K9U07_RS24795 (37035) 37035..39188 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
K9U07_RS24800 (39197) 39197..39595 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K9U07_RS24805 (39595) 39595..39822 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
K9U07_RS24810 (39904) 39904..45174 + 5271 WP_000986963.1 Multifunctional conjugation protein TraI Relaxase
K9U07_RS24815 (45194) 45194..45940 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
K9U07_RS24820 (45999) 45999..46859 + 861 WP_000704513.1 putative protein YcjY VF
K9U07_RS24825 (46962) 46962..47522 + 561 WP_000139315.1 fertility inhibition protein FinO -
K9U07_RS24830 (47658) 47658..47870 + 213 WP_001299730.1 ANR family transcriptional regulator -
K9U07_RS24835 (48116) 48116..48190 + 75 Protein_61 endonuclease -
- (48446) 48446..48507 - 62 NuclAT_1 - -
- (48446) 48446..48507 - 62 NuclAT_1 - -
- (48446) 48446..48507 - 62 NuclAT_1 - -
- (48446) 48446..48507 - 62 NuclAT_1 - -
K9U07_RS24840 (48551) 48551..48700 + 150 WP_001312851.1 Hok/Gef family protein -
K9U07_RS24845 (48984) 48984..49241 + 258 WP_000083845.1 replication regulatory protein RepA -
K9U07_RS24850 (49258) 49258..49509 - 252 WP_223195197.1 replication protein RepA -
K9U07_RS24855 (49500) 49500..49547 + 48 WP_229471593.1 hypothetical protein -
K9U07_RS24860 (49540) 49540..50022 + 483 WP_001273588.1 hypothetical protein -
K9U07_RS24865 (50015) 50015..50480 + 466 Protein_67 plasmid replication initiator RepA -
K9U07_RS24870 (50413) 50413..53418 - 3006 WP_001143760.1 Tn3 family transposase TnpA_Tn3 Transposase
K9U07_RS24875 (53582) 53582..54139 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
K9U07_RS24880 (54322) 54322..55182 + 861 WP_000027057.1 Beta-lactamase TEM ARG
K9U07_RS24885 (55413) 55413..56249 - 837 WP_000480972.1 hypothetical protein ARG
K9U07_RS24890 (56249) 56249..57052 - 804 WP_001082320.1 Aminoglycoside 3'-phosphotransferase ARG
K9U07_RS24895 (57113) 57113..57928 - 816 WP_001043260.1 Dihydropteroate synthase ARG
K9U07_RS24900 (58258) 58258..58344 + 87 Protein_74 Arm DNA-binding domain-containing protein -
K9U07_RS24905 (58616) 58616..59620 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
K9U07_RS24910 (59699) 59699..62665 - 2967 WP_228587545.1 Tn3 family transposase TnpA_ISPa38 Transposase
K9U07_RS24915 (62668) 62668..62982 - 315 Protein_77 Tn3 family transposase TnpR_TnAs3 Transposase
K9U07_RS24920 (63036) 63036..63740 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
K9U07_RS24925 (63810) 63810..64283 - 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
K9U07_RS24930 (64439) 64439..65452 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
K9U07_RS24935 (65900) 65900..66604 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
K9U07_RS24940 (66670) 66670..68184 + 1515 Protein_82 Tn3 family transposase TnpA_TnAs1 Transposase
K9U07_RS24945 (68242) 68242..68484 + 243 WP_000844627.1 transposase -
K9U07_RS24950 (68516) 68516..69166 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
K9U07_RS24955 (69272) 69272..70471 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
K9U07_RS24960 (70503) 70503..71387 - 885 WP_000058717.1 EamA family transporter -
K9U07_RS24965 (71525) 71525..71917 - 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
K9U07_RS24970 (71921) 71921..73672 + 1752 Protein_88 Tn3 family transposase TnpA_TnAs1 Transposase
K9U07_RS24975 (74530) 74530..74874 + 345 WP_001553768.1 hypothetical protein -
K9U07_RS24980 (75055) 75055..76200 - 1146 Protein_90 IS91 family transposase IS91 Transposase
K9U07_RS24985 (76200) 76200..76565 - 366 WP_000124098.1 hypothetical protein -
K9U07_RS24990 (76687) 76687..77838 - 1152 WP_001442799.1 IS30 family transposase IS30D Transposase
K9U07_RS24995 (77906) 77906..78163 - 258 Protein_93 IS3 family transposase IS911 Transposase
K9U07_RS25005 (78442) 78442..78636 - 195 Protein_94 IS91 family transposase -
K9U07_RS25010 (78804) 78804..82937 + 4134 WP_001080137.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
K9U07_RS25015 (83046) 83046..83438 + 393 Protein_96 peptide deformylase -
K9U07_RS25020 (83485) 83485..83751 - 267 Protein_97 Tn3 family transposase TnpR_TnEc1 Transposase
K9U07_RS25025 (83791) 83791..85328 - 1538 Protein_98 IS66 family transposase ISEc8 Transposase
K9U07_RS25030 (85378) 85378..85725 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
K9U07_RS25035 (85722) 85722..86102 - 381 WP_001171523.1 IS66 family transposase ISEc8 Transposase
K9U07_RS25040 (86178) 86178..87158 - 981 WP_001017346.1 NAD(P)-binding domain-containing protein -
K9U07_RS25045 (87155) 87155..87424 - 270 WP_000379710.1 SemiSWEET transporter -
K9U07_RS25050 (87426) 87426..87830 - 405 WP_001389361.1 hypothetical protein -
K9U07_RS25055 (87802) 87802..88245 - 444 WP_001323891.1 dehydrogenase -
K9U07_RS25060 (88364) 88364..88600 + 237 WP_001323890.1 colicin V immunity protein -
K9U07_RS25065 (88578) 88578..88889 + 312 WP_001259758.1 colicin V -
K9U07_RS25070 (89059) 89059..91155 - 2097 WP_000184924.1 microcin H47 export transporter peptidase/ATP-binding subunit MchF -
K9U07_RS25075 (91148) 91148..92422 - 1275 WP_000489609.1 HlyD family secretion protein -
K9U07_RS25080 (93033) 93033..93301 + 269 Protein_109 type II toxin-antitoxin system antitoxin YacA -
K9U07_RS25085 (93301) 93301..93426 + 126 Protein_110 type II toxin-antitoxin system toxin YacB -
K9U07_RS25090 (93594) 93594..93887 + 294 WP_000269327.1 DUF6404 family protein -
K9U07_RS25095 (93965) 93965..94266 - 302 Protein_112 hypothetical protein -
K9U07_RS25100 (94447) 94447..95481 + 1035 WP_228587536.1 3-deoxy-7-phosphoheptulonate synthase -
K9U07_RS25105 (96347) 96347..98524 + 2178 WP_001222185.1 Ferric enterobactin receptor VF
K9U07_RS25110 (98569) 98569..99525 - 957 WP_000271274.1 Ferri-bacillibactin esterase BesA VF
K9U07_RS25115 (99610) 99610..100839 - 1230 WP_000933678.1 Enterochelin esterase VF
K9U07_RS25120 (100943) 100943..104602 - 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
K9U07_RS25125 (104742) 104742..105857 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
K9U07_RS25130 (107168) 107168..108192 - 1025 Protein_119 integrase core domain-containing protein -
K9U07_RS25135 (108746) 108746..108945 + 200 Protein_120 lysis protein -
K9U07_RS25145 (109003) 109003..109296 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
K9U07_RS25150 (109921) 109921..110441 + 521 Protein_122 IS3 family transposase IS2 Transposase
K9U07_RS25160 (111673) 111673..112410 + 738 Protein_124 IS3 family transposase IS2 Transposase
K9U07_RS25165 (113652) 113652..114845 + 1194 WP_000450494.1 GTP-binding protein -
K9U07_RS25170 (115023) 115023..115172 + 150 Protein_126 IS3 family transposase IS2 Transposase
K9U07_RS25175 (115482) 115482..116871 + 1390 Protein_127 ISNCY family transposase ISKpn21 Transposase
K9U07_RS25180 (117106) 117106..118047 + 942 WP_000974762.1 hypothetical protein -
K9U07_RS25185 (118176) 118176..118370 - 195 Protein_129 IS200/IS605-like element IS200C family transposase -
K9U07_RS25190 (118844) 118844..120214 - 1371 WP_001312828.1 efflux transporter outer membrane subunit -
K9U07_RS25195 (120218) 120218..122158 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
K9U07_RS25200 (122155) 122155..123342 - 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
K9U07_RS25205 (123937) 123937..124277 - 341 Protein_133 IS3 family transposase -
K9U07_RS25210 (124323) 124323..124648 + 326 Protein_134 IS3 family transposase ISLad1 Transposase
K9U07_RS25215 (124796) 124796..125995 - 1200 Protein_135 IS3 family transposase IS629 Transposase
K9U07_RS25220 (126134) 126134..126313 + 180 Protein_136 integrase core domain-containing protein -
K9U07_RS25225 (127610) 127610..128563 + 954 WP_000280980.1 Protease 7 VF
K9U07_RS25230 (128996) 128996..130105 + 1110 WP_000771475.1 SDR family oxidoreductase -
K9U07_RS25235 (130174) 130174..131076 + 903 WP_001312822.1 hypothetical protein VF
K9U07_RS25240 (131450) 131450..131638 + 189 WP_001324033.1 hypothetical protein -
K9U07_RS25245 (131759) 131759..132499 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
K9U07_RS25250 (132784) 132784..133761 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
K9U07_RS25255 (134507) 134507..134830 + 324 Protein_143 IS21 family transposase IS21 Transposase
K9U07_RS25260 (134832) 134832..134936 + 105 Protein_144 AAA family ATPase -
K9U07_RS25265 (134997) 134997..135510 + 514 Protein_145 DUF4113 domain-containing protein -
K9U07_RS25275 (136743) 136743..137657 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
K9U07_RS25280 (137657) 137657..138484 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
K9U07_RS25285 (138481) 138481..139338 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
K9U07_RS25290 (139335) 139335..140192 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
K9U07_RS25295 (140681) 140681..141094 + 414 Protein_151 phosphopyruvate hydratase -
K9U07_RS25300 (141435) 141435..141815 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
K9U07_RS25305 (142195) 142195..143388 - 1194 WP_000095526.1 MFS transporter -
K9U07_RS25310 (143524) 143524..145248 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
K9U07_RS25315 (145249) 145249..146196 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
K9U07_RS25320 (146196) 146196..147938 + 1743 WP_001015721.1 Aerobactin synthase VF
K9U07_RS25325 (147935) 147935..149268 + 1334 Protein_157 L-lysine N6-monooxygenase VF
K9U07_RS25330 (149294) 149294..151495 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
K9U07_RS25335 (151875) 151875..152572 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
K9U07_RS25340 (152826) 152826..153848 - 1023 WP_000361402.1 helicase UvrD -
K9U07_RS25345 (153833) 153833..155398 - 1566 WP_001128474.1 AAA family ATPase -
K9U07_RS25350 (155473) 155473..155889 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K9U07_RS25355 (155886) 155886..156116 - 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
K9U07_RS25360 (156497) 156497..160291 + 3795 WP_001144731.1 hypothetical protein -
K9U07_RS25365 (160336) 160336..160752 - 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K9U07_RS25370 (160749) 160749..160979 - 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
K9U07_RS25375 (161244) 161244..161744 + 501 WP_000528932.1 HEPN family nuclease -
K9U07_RS25380 (161757) 161757..162530 + 774 WP_000905949.1 hypothetical protein -
K9U07_RS25385 (162697) 162697..163830 + 1134 WP_000545984.1 DUF3800 domain-containing protein -
K9U07_RS25390 (163864) 163864..164352 - 489 WP_011254646.1 hypothetical protein -
K9U07_RS25395 (164944) 164944..165162 + 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
K9U07_RS25400 (165164) 165164..165469 + 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
K9U07_RS25405 (165470) 165470..166276 + 807 WP_000016982.1 site-specific integrase -
K9U07_RS25410 (167028) 167028..167783 + 756 WP_000852146.1 replication initiation protein RepE -
K9U07_RS25415 (168371) 168371..169537 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
K9U07_RS25420 (169537) 169537..170508 + 972 WP_000817035.1 ParB/RepB/Spo0J family plasmid partition protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance