MGE detailed information
MGE type: Genomic_island MGE length: 16665 bp
Accession: NZ_CP083274 Location: 4156046..4172710 Organism: Escherichia coli strain Rosetta2-DE3 Replicon: chromosome
Accession: NZ_CP083274 Location: 4156046..4172710 Organism: Escherichia coli strain Rosetta2-DE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6U01_RS19960 (4151328) | 4151328..4152302 | + | 975 | WP_001300813.1 | porphobilinogen synthase | - |
| K6U01_RS19965 (4152409) | 4152409..4153260 | - | 852 | WP_000004024.1 | taurine dioxygenase | - |
| K6U01_RS19970 (4153257) | 4153257..4154084 | - | 828 | WP_000114585.1 | taurine ABC transporter permease TauC | - |
| K6U01_RS19975 (4154081) | 4154081..4154848 | - | 768 | WP_000939399.1 | taurine ABC transporter ATP-binding subunit | - |
| K6U01_RS19980 (4154861) | 4154861..4155823 | - | 963 | WP_001018416.1 | taurine ABC transporter substrate-binding protein | - |
| K6U01_RS19985 (4156028) | 4156028..4156399 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| K6U01_RS19990 (4156830) | 4156830..4157966 | + | 1137 | WP_221840786.1 | ISAs1 family transposase ISEc1 | Transposase |
| K6U01_RS19995 (4158007) | 4158007..4158777 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| K6U01_RS20000 (4158958) | 4158958..4159404 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| K6U01_RS20005 (4159447) | 4159447..4161891 | - | 2445 | WP_000973107.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| K6U01_RS20010 (4162131) | 4162131..4162709 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| K6U01_RS20015 (4162915) | 4162915..4163682 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| K6U01_RS20020 (4163653) | 4163653..4164393 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| K6U01_RS20025 (4164549) | 4164549..4164827 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| K6U01_RS20030 (4164830) | 4164830..4165090 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| K6U01_RS20035 (4165276) | 4165276..4166049 | + | 774 | WP_001353765.1 | hypothetical protein | VF |
| K6U01_RS20040 (4166225) | 4166225..4166722 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| K6U01_RS20045 (4166938) | 4166938..4168650 | - | 1713 | Protein_3947 | hypothetical protein | VF |
| K6U01_RS20050 (4168622) | 4168622..4169407 | + | 786 | WP_000207564.1 | hypothetical protein | VF |
| K6U01_RS20055 (4169478) | 4169478..4170533 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| K6U01_RS20060 (4170585) | 4170585..4170878 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| K6U01_RS20065 (4170881) | 4170881..4171279 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| K6U01_RS20070 (4171289) | 4171289..4171741 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| K6U01_RS20075 (4171987) | 4171987..4172190 | + | 204 | Protein_3953 | RtcB family protein | - |
| K6U01_RS20080 (4172189) | 4172189..4172710 | + | 522 | Protein_3954 | peptide chain release factor H | - |
| K6U01_RS20085 (4172767) | 4172767..4174224 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| K6U01_RS20090 (4174485) | 4174485..4174943 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4175539) | 4175539..4175619 | + | 81 | NuclAT_13 | - | - |
| - (4175539) | 4175539..4175619 | + | 81 | NuclAT_13 | - | - |
| - (4175539) | 4175539..4175619 | + | 81 | NuclAT_13 | - | - |
| - (4175539) | 4175539..4175619 | + | 81 | NuclAT_13 | - | - |
| K6U01_RS20095 (4175035) | 4175035..4176279 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| K6U01_RS20100 (4176337) | 4176337..4176738 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| K6U01_RS20105 (4176866) | 4176866..4177135 | + | 270 | Protein_3959 | phosphomannomutase CpsG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|