MGE detailed information
MGE type: Genomic_island MGE length: 14217 bp
Accession: NZ_CP083274 Location: 2970984..2985200 Organism: Escherichia coli strain Rosetta2-DE3 Replicon: chromosome
Accession: NZ_CP083274 Location: 2970984..2985200 Organism: Escherichia coli strain Rosetta2-DE3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6U01_RS14255 (2967799) | 2967799..2969484 | - | 1686 | WP_000628583.1 | ABC transporter ATP-binding protein/permease | - |
| K6U01_RS14260 (2969687) | 2969687..2969809 | + | 123 | WP_120795387.1 | protein YneP | - |
| K6U01_RS14265 (2969775) | 2969775..2970932 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| K6U01_RS14270 (2970984) | 2970984..2972666 | - | 1683 | WP_001318307.1 | sulfatase | - |
| K6U01_RS14275 (2973068) | 2973068..2973829 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| K6U01_RS14280 (2973904) | 2973904..2974101 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| K6U01_RS14285 (2974349) | 2974349..2976628 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| K6U01_RS14290 (2976962) | 2976962..2977876 | - | 915 | WP_000520676.1 | hypothetical protein | VF |
| K6U01_RS14295 (2977935) | 2977935..2978438 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| K6U01_RS14300 (2978451) | 2978451..2978981 | - | 531 | WP_000876763.1 | hypothetical protein | VF |
| K6U01_RS14305 (2978995) | 2978995..2981645 | - | 2651 | Protein_2819 | fimbrial biogenesis outer membrane usher protein | - |
| K6U01_RS14310 (2981687) | 2981687..2982397 | - | 711 | Protein_2820 | hypothetical protein | VF |
| K6U01_RS14315 (2982758) | 2982758..2983240 | - | 483 | WP_000931227.1 | hypothetical protein | VF |
| K6U01_RS14320 (2983612) | 2983612..2984934 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| K6U01_RS14325 (2984934) | 2984934..2985200 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| K6U01_RS14330 (2985423) | 2985423..2987003 | - | 1581 | Protein_2824 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| K6U01_RS14335 (2986999) | 2986999..2987775 | + | 777 | Protein_2825 | histidine kinase | - |
| K6U01_RS14340 (2987787) | 2987787..2988809 | + | 1023 | WP_000172488.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| K6U01_RS14345 (2988836) | 2988836..2989711 | + | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| K6U01_RS14350 (2989735) | 2989735..2990025 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |