MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NZ_CP082835 Location: 4031782..4041222 Organism: Escherichia coli strain 1613 Replicon: chromosome
Accession: NZ_CP082835 Location: 4031782..4041222 Organism: Escherichia coli strain 1613 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8O78_RS20310 (4027614) | 4027614..4028945 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| K8O78_RS20315 (4028967) | 4028967..4029956 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| K8O78_RS20320 (4030055) | 4030055..4030993 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| K8O78_RS20325 (4031308) | 4031308..4031526 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| K8O78_RS20330 (4031782) | 4031782..4032321 | + | 540 | WP_000675739.1 | protein YhaB | - |
| K8O78_RS20335 (4032343) | 4032343..4033530 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| K8O78_RS20345 (4034046) | 4034046..4035191 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| K8O78_RS20350 (4035288) | 4035288..4036178 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| K8O78_RS20355 (4036208) | 4036208..4036978 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| K8O78_RS20360 (4036994) | 4036994..4038328 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| K8O78_RS20365 (4038703) | 4038703..4040274 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| K8O78_RS20370 (4040423) | 4040423..4040758 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| K8O78_RS20375 (4040758) | 4040758..4041222 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| K8O78_RS20380 (4041277) | 4041277..4042086 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| K8O78_RS20385 (4042335) | 4042335..4043615 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| K8O78_RS20390 (4043638) | 4043638..4044111 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| K8O78_RS20395 (4044122) | 4044122..4044901 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| K8O78_RS20400 (4044891) | 4044891..4045769 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| K8O78_RS20405 (4045787) | 4045787..4046221 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |