MGE detailed information
MGE type: Prophage MGE length: 52418 bp
Accession: NZ_CP082772 Location: 2999928..3052345 Organism: Escherichia coli O2:H1 strain HM670 Replicon: chromosome
Accession: NZ_CP082772 Location: 2999928..3052345 Organism: Escherichia coli O2:H1 strain HM670 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B93_RS14785 (2995755) | 2995755..2996336 | + | 582 | WP_000572033.1 | replication/maintenance protein RepL | - |
| K8B93_RS14790 (2996421) | 2996421..2997101 | - | 681 | WP_001351137.1 | hypothetical protein | - |
| K8B93_RS14795 (2997326) | 2997326..2997805 | + | 480 | WP_001233369.1 | DUF4756 family protein | - |
| K8B93_RS14800 (2997964) | 2997964..2998368 | + | 405 | WP_001287374.1 | H-NS family nucleoid-associated regulatory protein | - |
| K8B93_RS14805 (2998432) | 2998432..2998782 | - | 351 | WP_000505229.1 | DUF6404 family protein | - |
| K8B93_RS14810 (2998891) | 2998891..2999133 | - | 243 | WP_000564596.1 | hypothetical protein | - |
| K8B93_RS14815 (2999206) | 2999206..2999502 | - | 297 | WP_001091321.1 | hypothetical protein | - |
| K8B93_RS14820 (2999555) | 2999555..2999845 | - | 291 | WP_000687678.1 | hypothetical protein | - |
| K8B93_RS14825 (2999928) | 2999928..3000146 | - | 219 | WP_001298701.1 | AlpA family transcriptional regulator | - |
| K8B93_RS14830 (3000363) | 3000363..3001199 | - | 837 | WP_001617668.1 | DUF6387 family protein | - |
| K8B93_RS14835 (3001878) | 3001878..3002450 | - | 573 | WP_000859544.1 | hypothetical protein | VF |
| K8B93_RS14840 (3002447) | 3002447..3003268 | - | 822 | WP_000734593.1 | Cytolethal distending toxin subunit B | VF |
| K8B93_RS14845 (3003265) | 3003265..3003978 | - | 714 | WP_000358619.1 | Cytolethal distending toxin subunit A | VF |
| K8B93_RS14850 (3004478) | 3004478..3004768 | - | 291 | WP_000355702.1 | hypothetical protein | - |
| K8B93_RS14855 (3004778) | 3004778..3005056 | - | 279 | WP_001204581.1 | hypothetical protein | - |
| K8B93_RS14860 (3005053) | 3005053..3007119 | - | 2067 | WP_021519608.1 | prophage tail fiber N-terminal domain-containing protein | - |
| K8B93_RS14865 (3007184) | 3007184..3007783 | - | 600 | WP_021519067.1 | Outer membrane protein X | VF |
| K8B93_RS14870 (3007851) | 3007851..3011549 | - | 3699 | WP_021529352.1 | phage tail protein | - |
| K8B93_RS14875 (3011610) | 3011610..3012182 | - | 573 | WP_021519610.1 | tail assembly protein | - |
| K8B93_RS14880 (3012179) | 3012179..3012922 | - | 744 | WP_021519611.1 | C40 family peptidase | - |
| K8B93_RS14885 (3012933) | 3012933..3013631 | - | 699 | WP_001617677.1 | phage minor tail protein L | - |
| K8B93_RS14890 (3013631) | 3013631..3013987 | - | 357 | WP_001330090.1 | phage tail protein | - |
| K8B93_RS14895 (3013965) | 3013965..3017192 | - | 3228 | WP_001552446.1 | phage tail tape measure protein | - |
| K8B93_RS14900 (3017239) | 3017239..3017517 | - | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| K8B93_RS14905 (3017541) | 3017541..3017912 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| K8B93_RS14910 (3017927) | 3017927..3018631 | - | 705 | WP_000097526.1 | immunoglobulin domain-containing protein | - |
| K8B93_RS14915 (3018692) | 3018692..3019036 | - | 345 | WP_001206306.1 | DUF3168 domain-containing protein | - |
| K8B93_RS14920 (3019033) | 3019033..3019479 | - | 447 | WP_000347792.1 | HK97 gp10 family phage protein | - |
| K8B93_RS14925 (3019479) | 3019479..3019817 | - | 339 | WP_001147814.1 | phage head closure protein | - |
| K8B93_RS14930 (3019826) | 3019826..3020143 | - | 318 | WP_000719066.1 | head-tail connector protein | - |
| K8B93_RS14935 (3020220) | 3020220..3021437 | - | 1218 | WP_000766108.1 | phage major capsid protein | - |
| K8B93_RS14940 (3021452) | 3021452..3022051 | - | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| K8B93_RS14945 (3022044) | 3022044..3023270 | - | 1227 | WP_000923131.1 | phage portal protein | - |
| K8B93_RS14950 (3023260) | 3023260..3023421 | - | 162 | WP_000811487.1 | hypothetical protein | - |
| K8B93_RS14955 (3023418) | 3023418..3025175 | - | 1758 | WP_001140907.1 | terminase large subunit | - |
| K8B93_RS14960 (3025175) | 3025175..3025657 | - | 483 | WP_001330091.1 | phage terminase small subunit P27 family | - |
| K8B93_RS14965 (3025805) | 3025805..3026155 | - | 351 | WP_001140109.1 | HNH endonuclease signature motif containing protein | - |
| K8B93_RS14970 (3026260) | 3026260..3026442 | - | 183 | WP_032145233.1 | Rz1 family lipoprotein | - |
| K8B93_RS14975 (3026659) | 3026659..3027192 | - | 534 | WP_001274707.1 | lysozyme | - |
| K8B93_RS14980 (3027248) | 3027248..3027562 | - | 315 | WP_000193273.1 | YdfR family protein | - |
| K8B93_RS14985 (3027567) | 3027567..3027782 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| K8B93_RS15010 (3028507) | 3028507..3029220 | - | 714 | WP_000342820.1 | hypothetical protein | - |
| K8B93_RS15015 (3029466) | 3029466..3030287 | - | 822 | WP_001235237.1 | antitermination protein | - |
| K8B93_RS15020 (3030284) | 3030284..3030658 | - | 375 | WP_001217427.1 | RusA family crossover junction endodeoxyribonuclease | - |
| K8B93_RS15025 (3030671) | 3030671..3031720 | - | 1050 | WP_001265292.1 | DUF968 domain-containing protein | - |
| K8B93_RS15030 (3031722) | 3031722..3032000 | - | 279 | WP_024193993.1 | hypothetical protein | - |
| K8B93_RS15035 (3032168) | 3032168..3032323 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| K8B93_RS15040 (3032561) | 3032561..3033226 | - | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| K8B93_RS15045 (3033401) | 3033401..3033826 | - | 426 | WP_001151152.1 | DUF977 family protein | - |
| K8B93_RS15050 (3033867) | 3033867..3034937 | - | 1071 | WP_001262355.1 | hypothetical protein | - |
| K8B93_RS15055 (3035009) | 3035009..3035434 | - | 426 | WP_000693918.1 | toxin YdaT family protein | - |
| K8B93_RS15060 (3035418) | 3035418..3035690 | - | 273 | WP_000887447.1 | YdaS family helix-turn-helix protein | - |
| K8B93_RS15065 (3035800) | 3035800..3036201 | + | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| K8B93_RS15070 (3036229) | 3036229..3036420 | + | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| K8B93_RS15075 (3036420) | 3036420..3036707 | + | 288 | WP_000936799.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K8B93_RS15080 (3036979) | 3036979..3037131 | + | 153 | WP_000379609.1 | DUF1391 family protein | - |
| K8B93_RS15085 (3037143) | 3037143..3037517 | + | 375 | WP_001553098.1 | hypothetical protein | - |
| K8B93_RS15090 (3037507) | 3037507..3037728 | - | 222 | WP_000202161.1 | hypothetical protein | - |
| K8B93_RS15095 (3038296) | 3038296..3039144 | + | 849 | WP_000935606.1 | Rha family phage regulatory protein | - |
| K8B93_RS15100 (3039190) | 3039190..3039411 | + | 222 | WP_000560231.1 | cell division protein FtsZ | - |
| K8B93_RS15105 (3039555) | 3039555..3042035 | + | 2481 | WP_000048602.1 | exonuclease | - |
| K8B93_RS15110 (3042094) | 3042094..3042297 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| K8B93_RS15115 (3042297) | 3042297..3043347 | + | 1051 | Protein_2941 | Tyrosine recombinase XerC ; Integrase | Integrase |
| K8B93_RS15125 (3043558) | 3043558..3044355 | + | 798 | WP_021528585.1 | DgsA anti-repressor MtfA | - |
| K8B93_RS15135 (3044693) | 3044693..3045955 | + | 1263 | WP_024174323.1 | Prophage integrase IntA ; Integrase | Integrase |
| K8B93_RS15140 (3046149) | 3046149..3047453 | - | 1305 | WP_000703047.1 | Salicylate synthase | VF |
| K8B93_RS15145 (3047481) | 3047481..3048761 | - | 1281 | WP_001286281.1 | Protein AmpG | VF |
| K8B93_RS15150 (3048754) | 3048754..3050556 | - | 1803 | WP_234287539.1 | Putative multidrug export ATP-binding/permease protein | VF |
| K8B93_RS15155 (3050543) | 3050543..3052255 | - | 1713 | WP_001327262.1 | Iron import ATP-binding/permease protein IrtA | VF |
| K8B93_RS15160 (3052512) | 3052512..3053471 | + | 960 | WP_000970688.1 | yersiniabactin transcriptional regulator YbtA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|