MGE detailed information
MGE type: Genomic_island MGE length: 14950 bp
Accession: NZ_CP082772 Location: 2505682..2520631 Organism: Escherichia coli O2:H1 strain HM670 Replicon: chromosome
Accession: NZ_CP082772 Location: 2505682..2520631 Organism: Escherichia coli O2:H1 strain HM670 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B93_RS12135 (2502497) | 2502497..2504182 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| K8B93_RS12140 (2504382) | 2504382..2504507 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| K8B93_RS12145 (2504473) | 2504473..2505630 | - | 1158 | WP_001304372.1 | anaerobic sulfatase maturase | - |
| K8B93_RS12150 (2505682) | 2505682..2507364 | - | 1683 | WP_001296072.1 | sulfatase | - |
| K8B93_RS12155 (2507766) | 2507766..2508527 | - | 762 | WP_000060504.1 | acid stress response transcriptional regulator YdeO | - |
| K8B93_RS12160 (2508603) | 2508603..2508800 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| K8B93_RS12165 (2509048) | 2509048..2511327 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| K8B93_RS12170 (2511666) | 2511666..2512580 | - | 915 | WP_000520591.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| K8B93_RS12175 (2512640) | 2512640..2513143 | - | 504 | WP_000825467.1 | Protein FimG | VF |
| K8B93_RS12180 (2513156) | 2513156..2513686 | - | 531 | WP_000876767.1 | Protein FimF | VF |
| K8B93_RS12185 (2513700) | 2513700..2516351 | - | 2652 | WP_234287590.1 | Outer membrane usher protein FimD | VF |
| K8B93_RS12190 (2516393) | 2516393..2517103 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| K8B93_RS12195 (2517108) | 2517108..2517593 | - | 486 | Protein_2368 | SDR family oxidoreductase | - |
| K8B93_RS12200 (2517742) | 2517742..2518323 | + | 582 | Protein_2369 | HTH-type transcriptional regulator PgrR | VF |
| K8B93_RS12205 (2518326) | 2518326..2518733 | + | 408 | Protein_2370 | HTH-type transcriptional regulator PgrR | VF |
| K8B93_RS12210 (2519043) | 2519043..2520365 | - | 1323 | WP_001125431.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| K8B93_RS12215 (2520365) | 2520365..2520631 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| K8B93_RS12220 (2520939) | 2520939..2521697 | + | 759 | WP_001286540.1 | trans-aconitate 2-methyltransferase | - |
| K8B93_RS12225 (2521701) | 2521701..2522615 | - | 915 | WP_001443133.1 | bestrophin family protein | - |
| K8B93_RS12230 (2522812) | 2522812..2524263 | - | 1452 | WP_000854660.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0.003 |