MGE detailed information
MGE type: Conjugative plasmid MGE length: 89947 bp
Accession: NZ_CP082358 Location: 1..89947 Organism: Escherichia coli strain VCSW7 Replicon: plasmid pVCSW7
Accession: NZ_CP082358 Location: 1..89947 Organism: Escherichia coli strain VCSW7 Replicon: plasmid pVCSW7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7X31_RS22370 () | 1..858 | + | 858 | WP_062897587.1 | incFII family plasmid replication initiator RepA | - |
| K7X31_RS22375 () | 1623..2819 | - | 1197 | WP_001358663.1 | IS110 family transposase ISEc20 | Transposase |
| K7X31_RS22385 () | 4824..5348 | + | 525 | WP_105633044.1 | hypothetical protein | VF |
| K7X31_RS22390 () | 5369..7807 | + | 2439 | WP_105633023.1 | Outer membrane usher protein YraJ | VF |
| K7X31_RS22395 () | 7800..8576 | + | 777 | WP_105633024.1 | Chaperone protein FaeE | VF |
| K7X31_RS22400 () | 8611..9102 | + | 492 | WP_105633025.1 | hypothetical protein | VF |
| K7X31_RS22405 () | 9340..10125 | + | 786 | WP_105633045.1 | hypothetical protein | - |
| K7X31_RS22410 () | 10349..11146 | + | 798 | WP_105633026.1 | hypothetical protein | VF |
| K7X31_RS22415 () | 11177..11941 | + | 765 | WP_105633027.1 | hypothetical protein | VF |
| K7X31_RS22420 () | 11958..12731 | + | 774 | WP_105633028.1 | hypothetical protein | VF |
| K7X31_RS22980 () | 13045..13427 | - | 383 | Protein_10 | transposase | - |
| K7X31_RS22425 () | 13851..14381 | - | 531 | WP_143189712.1 | hypothetical protein | VF |
| K7X31_RS22430 () | 14378..15016 | - | 639 | WP_105633031.1 | hypothetical protein | VF |
| K7X31_RS22435 () | 15929..17362 | - | 1434 | WP_105633033.1 | hypothetical protein | VF |
| K7X31_RS22985 () | 17452..17614 | - | 163 | Protein_14 | transcriptional regulator | - |
| K7X31_RS22440 () | 18482..19916 | + | 1435 | Protein_15 | AAA family ATPase | - |
| K7X31_RS22445 () | 20078..20494 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K7X31_RS22450 () | 20491..20721 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K7X31_RS22455 () | 21286..21699 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| K7X31_RS22460 () | 21701..22483 | + | 783 | WP_105633036.1 | site-specific integrase | - |
| K7X31_RS22465 () | 22656..23009 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| K7X31_RS22470 () | 23059..23874 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| K7X31_RS22475 () | 24117..24644 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| K7X31_RS22480 () | 24662..26197 | - | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| K7X31_RS22485 () | 26638..27150 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| K7X31_RS22490 () | 27301..27651 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| K7X31_RS22495 () | 27654..28616 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| K7X31_RS22500 () | 28762..29055 | + | 294 | WP_105633047.1 | hypothetical protein | - |
| K7X31_RS22505 () | 29132..29815 | + | 684 | WP_000085940.1 | DNA methylase | - |
| K7X31_RS22510 () | 29816..30037 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K7X31_RS22515 () | 29967..30485 | + | 519 | WP_236943475.1 | DUF1380 family protein | - |
| K7X31_RS22520 () | 30530..31300 | + | 771 | WP_181950487.1 | hypothetical protein | - |
| K7X31_RS22525 () | 31715..32140 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| K7X31_RS22530 () | 32187..32609 | + | 423 | WP_105633038.1 | DUF1380 family protein | - |
| K7X31_RS22535 () | 32606..32797 | + | 192 | WP_001027522.1 | hypothetical protein | - |
| K7X31_RS22540 () | 33834..34064 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K7X31_RS22545 () | 34116..35477 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| K7X31_RS22550 () | 35525..36088 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| K7X31_RS22990 () | 36085..36321 | + | 237 | WP_071849628.1 | hypothetical protein | - |
| K7X31_RS22995 () | 36240..36491 | + | 252 | WP_071828952.1 | hypothetical protein | - |
| K7X31_RS23000 () | 36732..36938 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K7X31_RS22555 () | 36964..37503 | + | 540 | WP_105633039.1 | single-stranded DNA-binding protein | - |
| K7X31_RS22560 () | 37565..37798 | + | 234 | WP_105633040.1 | DUF905 family protein | - |
| K7X31_RS22565 () | 37864..39822 | + | 1959 | WP_223025133.1 | ParB/RepB/Spo0J family partition protein | - |
| K7X31_RS22570 () | 39877..40311 | + | 435 | WP_105633042.1 | conjugation system SOS inhibitor PsiB | - |
| K7X31_RS22575 () | 40308..41070 | + | 763 | Protein_45 | plasmid SOS inhibition protein A | - |
| K7X31_RS22580 () | 41039..41227 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 41039..41263 | + | 225 | NuclAT_0 | - | - |
| - () | 41039..41263 | + | 225 | NuclAT_0 | - | - |
| - () | 41039..41263 | + | 225 | NuclAT_0 | - | - |
| - () | 41039..41263 | + | 225 | NuclAT_0 | - | - |
| - | 41196..41261 | - | 66 | - | - | Antitoxin Detail |
| K7X31_RS23005 () | 41249..41398 | + | 150 | Protein_47 | plasmid maintenance protein Mok | - |
| K7X31_RS22585 () | 41340..41465 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K7X31_RS23010 () | 41686..41916 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| K7X31_RS23015 () | 41914..42087 | - | 174 | Protein_50 | hypothetical protein | - |
| K7X31_RS23020 () | 42157..42363 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K7X31_RS22590 () | 42388..42675 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| K7X31_RS22595 () | 42759..43955 | - | 1197 | WP_001358663.1 | IS110 family transposase ISEc20 | Transposase |
| K7X31_RS22600 () | 44248..45069 | + | 822 | WP_143189711.1 | DUF932 domain-containing protein | - |
| K7X31_RS22605 () | 45366..45956 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| K7X31_RS22610 () | 46289..46672 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K7X31_RS22615 () | 46859..47548 | + | 690 | WP_000283384.1 | conjugal transfer transcriptional regulator TraJ | - |
| K7X31_RS22620 () | 47641..48042 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| K7X31_RS22625 () | 48075..48440 | + | 366 | WP_000994782.1 | type IV conjugative transfer system pilin TraA | - |
| K7X31_RS22630 () | 48455..48766 | + | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| K7X31_RS22635 () | 48788..49354 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| K7X31_RS22640 () | 49341..50069 | + | 729 | WP_001230783.1 | type-F conjugative transfer system secretin TraK | - |
| K7X31_RS22645 () | 50069..51496 | + | 1428 | WP_000146635.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K7X31_RS22650 () | 51486..52073 | + | 588 | WP_000002771.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K7X31_RS22655 () | 52060..52380 | + | 321 | WP_001057280.1 | conjugal transfer protein TrbD | - |
| K7X31_RS22660 () | 52377..52892 | + | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K7X31_RS22665 () | 53027..53248 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| K7X31_RS22670 () | 53408..56035 | + | 2628 | WP_001064260.1 | type IV secretion system protein TraC | - |
| K7X31_RS22675 () | 56032..56418 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| K7X31_RS22680 () | 56415..57047 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| K7X31_RS22685 () | 57044..58036 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| K7X31_RS22690 () | 58045..58683 | + | 639 | WP_024233422.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K7X31_RS22695 () | 58680..59060 | + | 381 | WP_000174466.1 | hypothetical protein | - |
| K7X31_RS22700 () | 59296..61158 | + | 1863 | WP_237710346.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K7X31_RS22705 () | 61185..61442 | + | 258 | WP_000864330.1 | conjugal transfer protein TrbE | - |
| K7X31_RS22710 () | 61435..62178 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K7X31_RS22715 () | 62194..62541 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| K7X31_RS22720 () | 62660..62944 | + | 285 | WP_024127867.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K7X31_RS22725 () | 62931..63476 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K7X31_RS22730 () | 63406..63768 | + | 363 | WP_071608404.1 | P-type conjugative transfer protein TrbJ | - |
| K7X31_RS22735 () | 63768..65141 | + | 1374 | WP_172449589.1 | conjugal transfer pilus assembly protein TraH | - |
| K7X31_RS22740 () | 65138..67960 | + | 2823 | WP_089615093.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K7X31_RS22745 () | 67976..68473 | + | 498 | WP_000605867.1 | hypothetical protein | - |
| K7X31_RS22750 () | 68505..69236 | + | 732 | WP_024257478.1 | conjugal transfer complement resistance protein TraT | - |
| K7X31_RS22755 () | 69489..71705 | + | 2217 | WP_086260416.1 | type IV conjugative transfer system coupling protein TraD | - |
| K7X31_RS22760 () | 71705..76975 | + | 5271 | WP_000986939.1 | Multifunctional conjugation protein TraI | Relaxase |
| K7X31_RS22765 () | 76995..77741 | + | 747 | WP_000205773.1 | conjugal transfer pilus acetylase TraX | - |
| K7X31_RS22770 () | 77796..78356 | + | 561 | WP_089553850.1 | fertility inhibition protein FinO | - |
| K7X31_RS22775 () | 78490..78702 | + | 213 | WP_032337303.1 | hypothetical protein | - |
| K7X31_RS22780 () | 78797..78985 | + | 189 | WP_001137617.1 | hypothetical protein | - |
| K7X31_RS22785 () | 78988..81537 | + | 2550 | WP_001262248.1 | DEAD/DEAH box helicase family protein | - |
| K7X31_RS22790 () | 81583..83616 | + | 2034 | WP_000887497.1 | N-6 DNA methylase | - |
| K7X31_RS22795 () | 83681..86536 | + | 2856 | WP_000043038.1 | hypothetical protein | - |
| K7X31_RS23025 () | 87113..87237 | + | 125 | Protein_94 | hypothetical protein | - |
| K7X31_RS22800 () | 87860..88009 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| K7X31_RS22805 () | 88341..88631 | + | 291 | WP_021532981.1 | DUF1778 domain-containing protein | - |
| K7X31_RS22810 () | 88622..89104 | + | 483 | WP_001420428.1 | GNAT family N-acetyltransferase | - |
| K7X31_RS22815 () | 89389..89646 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| K7X31_RS23030 () | 89750..89935 | + | 186 | Protein_99 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|