MGE detailed information
MGE type: Conjugative plasmid MGE length: 103282 bp
Accession: NZ_CP081888 Location: 1..103282 Organism: Escherichia coli strain WW2 Replicon: plasmid unnamed3
Accession: NZ_CP081888 Location: 1..103282 Organism: Escherichia coli strain WW2 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5O11_RS24545 (2716) | 2716..3918 | - | 1203 | WP_222563294.1 | restriction endonuclease subunit S | - |
| K5O11_RS24550 (3915) | 3915..5471 | - | 1557 | WP_222563295.1 | type I restriction-modification system subunit M | - |
| K5O11_RS24555 (5654) | 5654..5875 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5O11_RS24560 (5875) | 5875..6255 | + | 381 | WP_001694510.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K5O11_RS24565 (6260) | 6260..6439 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| K5O11_RS24570 (6467) | 6467..6745 | + | 279 | Protein_6 | pdcB | - |
| K5O11_RS24575 (6750) | 6750..7163 | + | 414 | Protein_7 | integrase core domain-containing protein | - |
| K5O11_RS24580 (7113) | 7113..7448 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| K5O11_RS24585 (7658) | 7658..8638 | - | 981 | WP_001567628.1 | IS5 family transposase IS5D | Transposase |
| K5O11_RS24590 (8882) | 8882..10285 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| K5O11_RS24595 (10272) | 10272..11204 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| K5O11_RS24600 (11313) | 11313..12359 | - | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| K5O11_RS24605 (12371) | 12371..12718 | - | 348 | Protein_13 | ABC transporter permease subunit | - |
| K5O11_RS24615 (13657) | 13657..13947 | - | 291 | WP_000648897.1 | hypothetical protein | - |
| K5O11_RS24620 (13947) | 13947..15071 | - | 1125 | WP_032174239.1 | DUF4238 domain-containing protein | - |
| K5O11_RS24625 (15106) | 15106..16629 | - | 1524 | WP_000921251.1 | hypothetical protein | - |
| K5O11_RS24630 (16955) | 16955..17659 | - | 705 | WP_009364894.1 | IS6 family transposase IS26 | Transposase |
| K5O11_RS24635 (17981) | 17981..18199 | + | 219 | WP_094337662.1 | hypothetical protein | - |
| K5O11_RS24640 (18199) | 18199..18789 | + | 591 | WP_001460360.1 | hypothetical protein | - |
| K5O11_RS24645 (19054) | 19054..20610 | + | 1557 | WP_000818361.1 | AAA family ATPase | - |
| K5O11_RS24650 (20805) | 20805..21422 | + | 618 | WP_089624214.1 | ProQ/FINO family protein | - |
| K5O11_RS24655 (21481) | 21481..22473 | - | 993 | WP_001420353.1 | hypothetical protein | - |
| K5O11_RS24660 (23384) | 23384..24415 | - | 1032 | WP_222563296.1 | plasmid replication initiator RepA | - |
| K5O11_RS25395 (25373) | 25373..25531 | + | 159 | Protein_25 | ash family protein | - |
| K5O11_RS24670 (25569) | 25569..25856 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| K5O11_RS24675 (26298) | 26298..26831 | + | 534 | WP_121308288.1 | transcription termination/antitermination NusG family protein | - |
| K5O11_RS24680 (27084) | 27084..27767 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| K5O11_RS24685 (27939) | 27939..28193 | + | 255 | WP_041031712.1 | PilI type IV pilus biogenesis protein | - |
| K5O11_RS24690 (29693) | 29693..30760 | + | 1068 | WP_222563297.1 | hypothetical protein | VF |
| K5O11_RS24695 (30760) | 30760..31197 | + | 438 | WP_130723503.1 | hypothetical protein | VF |
| K5O11_RS24700 (31211) | 31211..32893 | + | 1683 | WP_222563298.1 | Outer membrane lipoprotein BfpB | VF |
| K5O11_RS24705 (32886) | 32886..34181 | + | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| K5O11_RS24710 (34168) | 34168..34620 | + | 453 | WP_222563299.1 | hypothetical protein | VF |
| K5O11_RS24715 (34631) | 34631..36184 | + | 1554 | WP_222563300.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| K5O11_RS24720 (36197) | 36197..37282 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| K5O11_RS24725 (37299) | 37299..37913 | + | 615 | WP_222563301.1 | hypothetical protein | VF |
| K5O11_RS24730 (37923) | 37923..38483 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| K5O11_RS24735 (38468) | 38468..39124 | + | 657 | WP_003913606.1 | hypothetical protein | VF |
| K5O11_RS24740 (39124) | 39124..40416 | + | 1293 | WP_222563302.1 | hypothetical protein | VF |
| K5O11_RS24745 (40473) | 40473..40736 | - | 264 | Protein_41 | transposase | - |
| K5O11_RS24750 (40674) | 40674..40826 | + | 153 | WP_222563305.1 | shufflon-specific DNA recombinase | - |
| K5O11_RS24755 (40977) | 40977..41801 | + | 825 | WP_222563303.1 | conjugal transfer protein TraE | - |
| K5O11_RS24760 (41968) | 41968..42999 | - | 1032 | WP_001395480.1 | IS630 family transposase ISEc33 | Transposase |
| K5O11_RS24765 (43030) | 43030..44244 | + | 1215 | WP_261399656.1 | conjugal transfer protein TraF | - |
| K5O11_RS24770 (44304) | 44304..44888 | + | 585 | WP_074577400.1 | histidine phosphatase family protein | - |
| K5O11_RS24775 (45283) | 45283..45741 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| K5O11_RS24780 (45738) | 45738..46556 | + | 819 | WP_021555364.1 | hypothetical protein | VF |
| K5O11_RS24785 (46553) | 46553..47701 | + | 1149 | WP_074577398.1 | putative protein YggR | VF |
| K5O11_RS24790 (47698) | 47698..47988 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| K5O11_RS24795 (48003) | 48003..48554 | + | 552 | WP_074577397.1 | Phospholipase D | VF |
| K5O11_RS24800 (48644) | 48644..52411 | + | 3768 | WP_222563304.1 | DUF5710 domain-containing protein | - |
| K5O11_RS24805 (52429) | 52429..52776 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K5O11_RS24810 (52773) | 52773..53465 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| K5O11_RS24815 (53476) | 53476..54459 | + | 984 | WP_130723495.1 | hypothetical protein | VF |
| K5O11_RS24820 (54462) | 54462..55751 | + | 1290 | WP_074577393.1 | conjugal transfer protein TraO | - |
| K5O11_RS24825 (55751) | 55751..56455 | + | 705 | WP_130723494.1 | IncI1-type conjugal transfer protein TraP | - |
| K5O11_RS24830 (56455) | 56455..56982 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| K5O11_RS24835 (57033) | 57033..57437 | + | 405 | WP_130723493.1 | IncI1-type conjugal transfer protein TraR | - |
| K5O11_RS24840 (57501) | 57501..57689 | + | 189 | WP_222563288.1 | putative conjugal transfer protein TraS | - |
| K5O11_RS24845 (57673) | 57673..58473 | + | 801 | WP_130723492.1 | IncI1-type conjugal transfer protein TraT | - |
| K5O11_RS24850 (58563) | 58563..61607 | + | 3045 | WP_222563289.1 | IncI1-type conjugal transfer protein TraU | - |
| K5O11_RS24855 (61607) | 61607..62221 | + | 615 | WP_074577386.1 | IncI1-type conjugal transfer protein TraV | - |
| K5O11_RS24860 (62188) | 62188..63390 | + | 1203 | WP_021555368.1 | IncI1-type conjugal transfer protein TraW | - |
| K5O11_RS24865 (63419) | 63419..64003 | + | 585 | WP_130723490.1 | conjugal transfer protein TraX | - |
| K5O11_RS24870 (64100) | 64100..66268 | + | 2169 | WP_130723489.1 | DotA/TraY family protein | - |
| K5O11_RS24875 (66333) | 66333..66995 | + | 663 | WP_124046891.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| K5O11_RS24880 (67090) | 67090..67299 | + | 210 | WP_001140544.1 | hemolysin expression modulator Hha | - |
| K5O11_RS24885 (67482) | 67482..67658 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (68144) | 68144..68195 | + | 52 | NuclAT_1 | - | - |
| - (68144) | 68144..68195 | + | 52 | NuclAT_1 | - | - |
| - (68144) | 68144..68195 | + | 52 | NuclAT_1 | - | - |
| - (68144) | 68144..68195 | + | 52 | NuclAT_1 | - | - |
| K5O11_RS24890 (68589) | 68589..68840 | + | 252 | WP_024171163.1 | hypothetical protein | - |
| K5O11_RS24895 (68912) | 68912..69064 | - | 153 | WP_024179505.1 | Hok/Gef family protein | Toxin Detail |
| - (69116) | 69116..69176 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (69116) | 69116..69176 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (69116) | 69116..69176 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (69116) | 69116..69176 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| K5O11_RS24900 (69356) | 69356..70564 | + | 1209 | WP_024171190.1 | IncI1-type conjugal transfer protein TrbA | - |
| K5O11_RS24905 (70583) | 70583..71653 | + | 1071 | WP_124046954.1 | IncI1-type conjugal transfer protein TrbB | - |
| K5O11_RS24910 (71646) | 71646..73937 | + | 2292 | WP_222563290.1 | F-type conjugative transfer protein TrbC | - |
| K5O11_RS24915 (74010) | 74010..74828 | - | 819 | WP_001749195.1 | DUF2971 domain-containing protein | - |
| K5O11_RS24920 (74951) | 74951..77653 | - | 2703 | WP_112361782.1 | Protein TraI | Relaxase |
| K5O11_RS24925 (77664) | 77664..77996 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| K5O11_RS24930 (78230) | 78230..78565 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| K5O11_RS24935 (78650) | 78650..79498 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| K5O11_RS24945 (80078) | 80078..80329 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| K5O11_RS24950 (80360) | 80360..80593 | - | 234 | WP_162861452.1 | hypothetical protein | - |
| K5O11_RS24955 (80593) | 80593..81495 | - | 903 | WP_054170928.1 | Recombination-promoting nuclease RpnA | VF |
| K5O11_RS24960 (81560) | 81560..81826 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| K5O11_RS24965 (81919) | 81919..82353 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| K5O11_RS24970 (83081) | 83081..83581 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| K5O11_RS24975 (84044) | 84044..84640 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| K5O11_RS24980 (84637) | 84637..85356 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| K5O11_RS24985 (85353) | 85353..85787 | - | 435 | WP_222563291.1 | conjugation system SOS inhibitor PsiB | - |
| K5O11_RS24990 (85842) | 85842..87800 | - | 1959 | WP_222563292.1 | ParB/RepB/Spo0J family partition protein | - |
| K5O11_RS24995 (87862) | 87862..88095 | - | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| K5O11_RS25000 (88152) | 88152..88679 | - | 528 | WP_053264372.1 | single-stranded DNA-binding protein | - |
| K5O11_RS25005 (89062) | 89062..89376 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| K5O11_RS25010 (89447) | 89447..89638 | - | 192 | WP_112046903.1 | hypothetical protein | - |
| K5O11_RS25015 (89635) | 89635..90057 | - | 423 | WP_061671614.1 | DUF1380 family protein | - |
| K5O11_RS25020 (90104) | 90104..90529 | - | 426 | WP_001198930.1 | antirestriction protein | - |
| K5O11_RS25025 (90941) | 90941..91717 | - | 777 | WP_061671617.1 | hypothetical protein | - |
| K5O11_RS25030 (91763) | 91763..92316 | - | 554 | Protein_97 | DUF1380 domain-containing protein | - |
| K5O11_RS25035 (92210) | 92210..92431 | - | 222 | WP_021560304.1 | hypothetical protein | - |
| K5O11_RS25040 (92432) | 92432..93115 | - | 684 | WP_000086185.1 | DNA methylase | - |
| K5O11_RS25045 (93192) | 93192..93503 | - | 312 | WP_222563307.1 | hypothetical protein | - |
| K5O11_RS25050 (93500) | 93500..94402 | - | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| K5O11_RS25055 (94820) | 94820..95068 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| K5O11_RS25060 (95065) | 95065..95502 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K5O11_RS25065 (95502) | 95502..96773 | + | 1272 | WP_052971087.1 | Y-family DNA polymerase | - |
| K5O11_RS25070 (96778) | 96778..97170 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| K5O11_RS25075 (97175) | 97175..98146 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| K5O11_RS25080 (98375) | 98375..99019 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| K5O11_RS25085 (99013) | 99013..99288 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| K5O11_RS25090 (99426) | 99426..100208 | - | 783 | WP_094337470.1 | site-specific integrase | - |
| K5O11_RS25095 (100276) | 100276..100884 | - | 609 | WP_000715519.1 | hypothetical protein | - |
| K5O11_RS25100 (100944) | 100944..101267 | - | 324 | WP_094337471.1 | hypothetical protein | - |
| K5O11_RS25105 (101467) | 101467..101673 | - | 207 | Protein_112 | hypothetical protein | - |
| K5O11_RS25110 (101913) | 101913..102335 | - | 423 | Protein_113 | ATP-binding protein | - |
| K5O11_RS25115 (102379) | 102379..102546 | - | 168 | Protein_114 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|