MGE detailed information
MGE type: Conjugative plasmid MGE length: 33485 bp
Accession: NZ_CP081834 Location: 1..33485 Organism: Vagococcus lutrae strain BN31 Replicon: plasmid pBN31-cfrD
Accession: NZ_CP081834 Location: 1..33485 Organism: Vagococcus lutrae strain BN31 Replicon: plasmid pBN31-cfrD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5X77_RS09840 (K5X77_09840) | 241..489 | + | 249 | WP_010752677.1 | helix-turn-helix transcriptional regulator | - |
| K5X77_RS09845 (K5X77_09845) | 868..1167 | + | 300 | WP_002325779.1 | hypothetical protein | - |
| K5X77_RS09850 (K5X77_09850) | 1210..2700 | + | 1491 | WP_044980265.1 | primase C-terminal domain-containing protein | - |
| K5X77_RS09855 (K5X77_09855) | 3048..3218 | + | 171 | WP_000713595.1 | hypothetical protein | - |
| K5X77_RS09860 (K5X77_09860) | 3232..3849 | + | 618 | WP_172689916.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| K5X77_RS09865 (K5X77_09865) | 3849..5993 | + | 2145 | WP_000108743.1 | type IA DNA topoisomerase | - |
| K5X77_RS09870 (K5X77_09870) | 6127..6366 | + | 240 | WP_002425012.1 | peptide-binding protein | - |
| K5X77_RS09875 (K5X77_09875) | 6430..6498 | + | 69 | WP_011100846.1 | 23S rRNA methyltransferase attenuator leader peptide ErmL | - |
| K5X77_RS09880 (K5X77_09880) | 6623..7360 | + | 738 | WP_032495453.1 | rRNA adenine N-6-methyltransferase | ARG |
| K5X77_RS09885 (K5X77_09885) | 7530..7790 | + | 261 | Protein_9 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| K5X77_RS09890 (K5X77_09890) | 7893..8789 | + | 897 | WP_222319357.1 | ParA family protein | - |
| K5X77_RS09895 (K5X77_09895) | 8881..9096 | + | 216 | WP_001835296.1 | peptide-binding protein | - |
| K5X77_RS09900 (K5X77_09900) | 9114..9386 | + | 273 | WP_002333002.1 | antitoxin | Antitoxin Detail |
| K5X77_RS09905 (K5X77_09905) | 9388..10281 | + | 894 | WP_222319359.1 | zeta toxin family protein | Toxin Detail |
| K5X77_RS09910 (K5X77_09910) | 10319..10999 | + | 681 | WP_044291606.1 | IS6 family transposase IS1216E | Transposase |
| K5X77_RS09915 (K5X77_09915) | 11033..11344 | - | 312 | WP_172443271.1 | ISNCY family transposase IS1202 | Transposase |
| K5X77_RS09920 (K5X77_09920) | 11789..12862 | + | 1074 | WP_216807377.1 | Ribosomal RNA large subunit methyltransferase Cfr | ARG |
| K5X77_RS09925 (K5X77_09925) | 12946..13680 | - | 735 | Protein_17 | glutamine-hydrolyzing GMP synthase | - |
| K5X77_RS09930 (K5X77_09930) | 13743..14423 | - | 681 | WP_044291606.1 | IS6 family transposase IS1216E | Transposase |
| K5X77_RS09935 (K5X77_09935) | 14494..14598 | + | 105 | Protein_19 | peptide-binding protein | - |
| K5X77_RS09940 (K5X77_09940) | 14615..14887 | + | 273 | WP_005237730.1 | antitoxin | Antitoxin Detail |
| K5X77_RS09945 (K5X77_09945) | 14889..15752 | + | 864 | WP_222319361.1 | zeta toxin family protein | Toxin Detail |
| K5X77_RS09950 (K5X77_09950) | 16193..16510 | + | 318 | WP_002300567.1 | hypothetical protein | - |
| K5X77_RS09955 (K5X77_09955) | 17044..17541 | + | 498 | WP_002300565.1 | molecular chaperone DnaJ | - |
| K5X77_RS09960 (K5X77_09960) | 17575..17808 | + | 234 | WP_002332654.1 | hypothetical protein | - |
| K5X77_RS09965 (K5X77_09965) | 17902..18159 | - | 258 | WP_002325623.1 | hypothetical protein | - |
| K5X77_RS09970 (K5X77_09970) | 18162..18461 | - | 300 | WP_002301627.1 | hypothetical protein | - |
| K5X77_RS09975 (K5X77_09975) | 18744..20738 | + | 1995 | WP_229256251.1 | Mobilization protein A | Relaxase |
| K5X77_RS09980 (K5X77_09980) | 20762..21094 | + | 333 | WP_000713503.1 | CagC family type IV secretion system protein | - |
| K5X77_RS09985 (K5X77_09985) | 21113..21496 | + | 384 | WP_001083514.1 | glycosyl transferase | - |
| K5X77_RS09990 (K5X77_09990) | 21513..22142 | + | 630 | WP_002325627.1 | hypothetical protein | - |
| K5X77_RS09995 (K5X77_09995) | 22153..24114 | + | 1962 | WP_000411529.1 | hypothetical protein | - |
| K5X77_RS10000 (K5X77_10000) | 24128..25480 | + | 1353 | WP_002325628.1 | hypothetical protein | - |
| K5X77_RS10005 (K5X77_10005) | 25502..26611 | + | 1110 | WP_222319352.1 | N-acetylmuramoyl-L-alanine amidase domain-containing protein | VF |
| K5X77_RS10010 (K5X77_10010) | 26624..27175 | + | 552 | WP_000393725.1 | hypothetical protein | - |
| K5X77_RS10015 (K5X77_10015) | 27180..27611 | + | 432 | WP_002301637.1 | hypothetical protein | - |
| K5X77_RS10020 (K5X77_10020) | 27604..29259 | + | 1656 | WP_070544065.1 | type IV secretory system conjugative DNA transfer family protein | - |
| K5X77_RS10025 (K5X77_10025) | 29277..30200 | + | 924 | WP_010750198.1 | hypothetical protein | - |
| K5X77_RS10030 (K5X77_10030) | 30164..31132 | + | 969 | WP_246616581.1 | hypothetical protein | - |
| K5X77_RS10035 (K5X77_10035) | 31149..32126 | + | 978 | WP_010750196.1 | hypothetical protein | - |
| K5X77_RS10040 (K5X77_10040) | 32153..32521 | + | 369 | WP_010750195.1 | hypothetical protein | - |
| K5X77_RS10045 (K5X77_10045) | 32581..33384 | + | 804 | WP_222319354.1 | Levansucrase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|