MGE detailed information
MGE type: Genomic_island MGE length: 47651 bp
Accession: NZ_CP081767 Location: 4440872..4488522 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Accession: NZ_CP081767 Location: 4440872..4488522 Organism: Escherichia coli strain 0H18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O59_RS21790 (4436499) | 4436499..4436837 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| J6O59_RS21795 (4436813) | 4436813..4438510 | + | 1698 | WP_000068974.1 | protein-disulfide reductase DsbD | - |
| J6O59_RS21800 (4438547) | 4438547..4439122 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| J6O59_RS21810 (4439502) | 4439502..4440764 | + | 1263 | WP_001218854.1 | integrase arm-type DNA-binding domain-containing protein | - |
| J6O59_RS21820 (4441718) | 4441718..4442239 | + | 522 | Protein_4275 | hypothetical protein ; Integrase | Integrase |
| J6O59_RS21825 (4442309) | 4442309..4442545 | + | 237 | WP_024195749.1 | hypothetical protein | - |
| J6O59_RS21830 (4442561) | 4442561..4442833 | + | 273 | WP_001547725.1 | hypothetical protein | - |
| J6O59_RS21835 (4442864) | 4442864..4443073 | - | 210 | WP_001547726.1 | hypothetical protein | - |
| J6O59_RS21840 (4443170) | 4443170..4444207 | - | 1038 | WP_001547728.1 | major capsid protein | - |
| J6O59_RS21845 (4444232) | 4444232..4444576 | - | 345 | WP_001547729.1 | hypothetical protein | - |
| J6O59_RS21850 (4444740) | 4444740..4445049 | - | 310 | Protein_4281 | integrase core domain-containing protein | - |
| J6O59_RS21855 (4445066) | 4445066..4446142 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| J6O59_RS21860 (4446424) | 4446424..4446603 | - | 180 | Protein_4283 | DDE-type integrase/transposase/recombinase | - |
| J6O59_RS21865 (4446684) | 4446684..4448192 | - | 1509 | WP_032142258.1 | group II intron reverse transcriptase/maturase | - |
| J6O59_RS21870 (4448865) | 4448865..4449574 | - | 710 | Protein_4285 | IS3 family transposase IS3 | Transposase |
| J6O59_RS21875 (4449671) | 4449671..4450198 | + | 528 | WP_223584368.1 | HNH endonuclease | - |
| J6O59_RS27175 (4450542) | 4450542..4450619 | + | 78 | Protein_4287 | hypothetical protein | - |
| J6O59_RS21885 (4450685) | 4450685..4451725 | + | 1041 | WP_223584496.1 | IS66 family transposase ISEc22 | Transposase |
| J6O59_RS21890 (4451768) | 4451768..4452520 | + | 753 | Protein_4289 | IS30 family transposase IS30D | Transposase |
| J6O59_RS21895 (4452533) | 4452533..4452790 | - | 258 | Protein_4290 | IS3 family transposase ISEc52 | Transposase |
| J6O59_RS21900 (4452861) | 4452861..4453105 | + | 245 | Protein_4291 | IS30 family transposase | - |
| J6O59_RS21905 (4453642) | 4453642..4456935 | - | 3294 | WP_223584370.1 | Outer membrane protein IcsA autotransporter | VF |
| J6O59_RS21910 (4457115) | 4457115..4458095 | + | 981 | WP_001547740.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O59_RS21915 (4458278) | 4458278..4459252 | + | 975 | WP_000130706.1 | porphobilinogen synthase | - |
| J6O59_RS21920 (4459380) | 4459380..4461104 | + | 1725 | WP_001547741.1 | lysophospholipid acyltransferase family protein | - |
| J6O59_RS21925 (4461172) | 4461172..4462023 | - | 852 | WP_001547743.1 | taurine dioxygenase | - |
| J6O59_RS21930 (4462020) | 4462020..4462847 | - | 828 | WP_001547744.1 | taurine ABC transporter permease TauC | - |
| J6O59_RS21935 (4462844) | 4462844..4463611 | - | 768 | WP_000932310.1 | Taurine import ATP-binding protein TauB | VF |
| J6O59_RS21940 (4463622) | 4463622..4464584 | - | 963 | WP_001018397.1 | taurine ABC transporter substrate-binding protein | - |
| J6O59_RS21945 (4465258) | 4465258..4466190 | - | 933 | WP_000081354.1 | homocysteine S-methyltransferase | - |
| J6O59_RS21950 (4466177) | 4466177..4467577 | - | 1401 | WP_001194698.1 | S-methylmethionine permease | - |
| J6O59_RS21955 (4467941) | 4467941..4469050 | + | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| J6O59_RS21960 (4469170) | 4469170..4470954 | + | 1785 | WP_001217015.1 | diguanylate cyclase | - |
| J6O59_RS21965 (4470967) | 4470967..4471371 | - | 405 | WP_000334957.1 | Regulatory protein SoxS | VF |
| J6O59_RS21970 (4471495) | 4471495..4472139 | - | 645 | WP_001547746.1 | HTH-type transcriptional regulator AcrR | VF |
| J6O59_RS21980 (4473226) | 4473226..4473462 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O59_RS21985 (4473462) | 4473462..4473905 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O59_RS21990 (4473928) | 4473928..4474395 | + | 468 | WP_001547765.1 | protein YkfB | - |
| J6O59_RS21995 (4474472) | 4474472..4474711 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O59_RS22000 (4474809) | 4474809..4475267 | + | 459 | WP_001548150.1 | antirestriction protein | - |
| J6O59_RS22005 (4475283) | 4475283..4475759 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O59_RS22010 (4475768) | 4475768..4475989 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O59_RS22015 (4476008) | 4476008..4476334 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O59_RS22020 (4476424) | 4476424..4476801 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O59_RS22025 (4476798) | 4476798..4477286 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O59_RS22030 (4477298) | 4477298..4477495 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O59_RS22035 (4477580) | 4477580..4478422 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O59_RS22040 (4479171) | 4479171..4480709 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O59_RS22045 (4481075) | 4481075..4482409 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J6O59_RS22050 (4482489) | 4482489..4484636 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O59_RS22055 (4484695) | 4484695..4486152 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O59_RS22060 (4486389) | 4486389..4487906 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O59_RS22065 (4488025) | 4488025..4488198 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O59_RS22070 (4488226) | 4488226..4488522 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O59_RS22075 (4488749) | 4488749..4489021 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O59_RS22080 (4489033) | 4489033..4489263 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O59_RS22085 (4489444) | 4489444..4491075 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O59_RS22090 (4491072) | 4491072..4491791 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|