MGE detailed information
MGE type: Mobilizable plasmid MGE length: 146661 bp
Accession: NZ_CP081763 Location: 1..146661 Organism: Escherichia coli strain CX21 Replicon: plasmid unnamed1
Accession: NZ_CP081763 Location: 1..146661 Organism: Escherichia coli strain CX21 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O46_RS24480 | 97..576 | + | 480 | WP_223613428.1 | hypothetical protein | - |
| J6O46_RS24485 | 608..1435 | + | 828 | WP_223613430.1 | site-specific integrase | - |
| J6O46_RS24490 (J6O46_24395) | 1432..4365 | + | 2934 | WP_061301086.1 | site-specific integrase | - |
| J6O46_RS24495 (J6O46_24400) | 4385..4723 | + | 339 | WP_223613432.1 | hypothetical protein | - |
| J6O46_RS24500 (J6O46_24405) | 4846..6108 | - | 1263 | WP_061301089.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| J6O46_RS24505 (J6O46_24410) | 6111..6530 | - | 420 | WP_061301088.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O46_RS24510 (J6O46_24415) | 6740..6979 | + | 240 | WP_061301084.1 | hypothetical protein | - |
| J6O46_RS24515 (J6O46_24420) | 7135..8958 | + | 1824 | WP_061301083.1 | AAA family ATPase | - |
| J6O46_RS24520 (J6O46_24425) | 8960..10855 | + | 1896 | WP_061301082.1 | ATP-dependent helicase | - |
| J6O46_RS24525 (J6O46_24430) | 11268..12626 | + | 1359 | WP_061301081.1 | hypothetical protein | - |
| J6O46_RS24530 (J6O46_24435) | 12857..13948 | - | 1092 | WP_061301080.1 | DUF2442 domain-containing protein | - |
| J6O46_RS24535 (J6O46_24440) | 14155..14592 | - | 438 | Protein_12 | DNA polymerase V subunit UmuC | - |
| J6O46_RS24540 (J6O46_24445) | 14592..15017 | - | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O46_RS24545 (J6O46_24450) | 15418..16905 | + | 1488 | WP_162536192.1 | group II intron reverse transcriptase/maturase | - |
| J6O46_RS24550 (J6O46_24455) | 17056..17753 | + | 698 | WP_088765925.1 | IS1 family transposase IS1X4 | Transposase |
| J6O46_RS24555 (J6O46_24460) | 17763..18071 | + | 309 | Protein_16 | replication initiation protein | - |
| J6O46_RS24560 (J6O46_24465) | 18751..19776 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| J6O46_RS24565 (J6O46_24470) | 20071..21039 | + | 969 | WP_077633842.1 | IS5 family transposase IS903B | Transposase |
| J6O46_RS24575 (J6O46_24480) | 22516..23208 | - | 693 | WP_001515702.1 | carboxymuconolactone decarboxylase family protein | - |
| J6O46_RS24580 (J6O46_24485) | 23440..24264 | - | 825 | WP_000058769.1 | N-formylglutamate deformylase | - |
| J6O46_RS24585 (J6O46_24490) | 24261..25523 | - | 1263 | WP_001515701.1 | imidazolonepropionase | - |
| J6O46_RS24590 (J6O46_24495) | 25677..26477 | - | 801 | WP_001294851.1 | histidine utilization repressor | - |
| J6O46_RS24595 (J6O46_24500) | 26719..28092 | + | 1374 | WP_001112072.1 | formimidoylglutamate deiminase | - |
| J6O46_RS24600 (J6O46_24505) | 28089..28685 | + | 597 | WP_000148344.1 | HutD family protein | - |
| J6O46_RS24605 (J6O46_24510) | 28924..29910 | + | 987 | WP_000069054.1 | ABC transporter substrate-binding protein | - |
| J6O46_RS24610 (J6O46_24515) | 29922..30803 | + | 882 | WP_001087990.1 | ABC transporter permease | - |
| J6O46_RS24615 (J6O46_24520) | 30803..31588 | + | 786 | WP_000121312.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| J6O46_RS24620 (J6O46_24525) | 31703..33253 | + | 1551 | WP_000741484.1 | histidine ammonia-lyase | - |
| J6O46_RS24625 (J6O46_24530) | 33297..34979 | + | 1683 | WP_000993475.1 | urocanate hydratase | - |
| J6O46_RS24630 (J6O46_24535) | 35038..36204 | + | 1167 | WP_000135555.1 | histidinol-phosphate transaminase | - |
| J6O46_RS24635 (J6O46_24540) | 36201..37358 | + | 1158 | WP_000217345.1 | alpha-hydroxy acid oxidase | - |
| J6O46_RS24640 (J6O46_24545) | 37392..38477 | + | 1086 | WP_001148851.1 | iron-containing alcohol dehydrogenase family protein | - |
| J6O46_RS24645 (J6O46_24550) | 38567..38878 | - | 312 | WP_024191312.1 | hypothetical protein | - |
| J6O46_RS24650 (J6O46_24555) | 38932..39912 | + | 981 | WP_223610879.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24655 (J6O46_24560) | 40060..41052 | - | 993 | WP_001145102.1 | hypothetical protein | - |
| J6O46_RS24660 (J6O46_24565) | 41101..41256 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| J6O46_RS24665 (J6O46_24570) | 41539..42519 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24670 (J6O46_24575) | 42797..43078 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O46_RS24675 (J6O46_24580) | 43059..43388 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O46_RS24680 (J6O46_24585) | 44085..45467 | - | 1383 | WP_000426307.1 | diguanylate cyclase | - |
| J6O46_RS24685 (J6O46_24590) | 45666..46370 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O46_RS24690 (J6O46_24595) | 46435..46665 | + | 231 | Protein_43 | IS5/IS1182 family transposase | - |
| J6O46_RS24700 (J6O46_24605) | 47693..48094 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| J6O46_RS24705 (J6O46_24610) | 48027..48284 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| J6O46_RS24710 (J6O46_24615) | 48377..49030 | - | 654 | WP_000616806.1 | CPBP family intramembrane metalloprotease | - |
| J6O46_RS24715 (J6O46_24620) | 49968..50825 | - | 858 | Protein_48 | incFII family plasmid replication initiator RepA | - |
| J6O46_RS24720 (J6O46_24625) | 50818..50892 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| J6O46_RS24725 (J6O46_24630) | 51127..51384 | - | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| J6O46_RS24730 (J6O46_24635) | 51624..52202 | - | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| J6O46_RS24735 (J6O46_24640) | 52235..52932 | + | 698 | WP_223610878.1 | IS1 family transposase IS1R | Transposase |
| J6O46_RS24740 (J6O46_24645) | 52949..53692 | + | 744 | Protein_53 | RNA 3'-terminal phosphate cyclase | - |
| J6O46_RS24745 (J6O46_24650) | 53735..56440 | - | 2706 | WP_016239750.1 | HTH-type transcriptional regulator MalT | VF |
| J6O46_RS24750 (J6O46_24655) | 56769..57466 | + | 698 | WP_223419864.1 | IS1 family transposase IS1R | Transposase |
| J6O46_RS24755 (J6O46_24660) | 57619..59751 | - | 2133 | WP_001192442.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| J6O46_RS24760 (J6O46_24665) | 59753..61102 | - | 1350 | WP_000020380.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| J6O46_RS24765 (J6O46_24670) | 61099..61980 | - | 882 | WP_001549866.1 | efflux RND transporter periplasmic adaptor subunit | - |
| J6O46_RS24770 (J6O46_24675) | 61995..63914 | - | 1920 | WP_000989158.1 | TolC family protein | - |
| J6O46_RS24775 (J6O46_24680) | 63991..77370 | - | 13380 | WP_153681168.1 | Ig-like domain-containing protein | - |
| J6O46_RS24780 (J6O46_24685) | 77918..78898 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24785 (J6O46_24690) | 80117..81088 | - | 972 | WP_000817039.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J6O46_RS24790 (J6O46_24695) | 81088..82254 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| J6O46_RS24795 (J6O46_24700) | 83006..84016 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| J6O46_RS24800 (J6O46_24705) | 84733..85473 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| J6O46_RS24805 | 85805..86135 | - | 331 | Protein_66 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O46_RS24810 (J6O46_24710) | 86122..86428 | - | 307 | Protein_67 | type II toxin-antitoxin system ParD family antitoxin | - |
| J6O46_RS24815 (J6O46_24715) | 86619..88292 | - | 1674 | WP_000026497.1 | hypothetical protein | - |
| J6O46_RS24820 | 88522..88659 | - | 138 | WP_223610884.1 | hypothetical protein | - |
| J6O46_RS24825 (J6O46_24725) | 88773..89753 | - | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24830 (J6O46_24730) | 90057..90866 | - | 810 | WP_000654269.1 | hypothetical protein | - |
| J6O46_RS24835 (J6O46_24735) | 90884..91246 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| J6O46_RS24840 (J6O46_24740) | 91430..91852 | - | 423 | WP_162534719.1 | hypothetical protein | - |
| J6O46_RS24845 (J6O46_24745) | 91809..92039 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O46_RS24850 (J6O46_24750) | 92036..92452 | + | 417 | WP_001044765.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O46_RS24855 (J6O46_24755) | 92526..94088 | + | 1563 | WP_001128475.1 | AAA family ATPase | - |
| J6O46_RS24860 (J6O46_24760) | 94073..95095 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| J6O46_RS24870 (J6O46_24770) | 96024..96245 | + | 222 | Protein_79 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24875 (J6O46_24775) | 96346..96711 | - | 366 | WP_001515713.1 | hypothetical protein | - |
| J6O46_RS24880 (J6O46_24780) | 96708..97193 | - | 486 | WP_000045622.1 | conjugative transfer protein MobI(A/C) | - |
| J6O46_RS24885 (J6O46_24785) | 97951..98751 | + | 801 | WP_001515712.1 | hypothetical protein | - |
| J6O46_RS24890 (J6O46_24790) | 98845..99825 | + | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O46_RS24895 (J6O46_24795) | 100198..100977 | + | 780 | WP_223196906.1 | DsbA family protein | - |
| J6O46_RS24900 | 101024..101092 | - | 69 | WP_228636870.1 | DUF4113 domain-containing protein | - |
| J6O46_RS24905 (J6O46_24805) | 101552..101773 | + | 222 | WP_001124949.1 | hypothetical protein | - |
| J6O46_RS24910 (J6O46_24810) | 101877..102574 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O46_RS24915 (J6O46_24815) | 102958..103962 | - | 1005 | WP_000851062.1 | LacI family DNA-binding transcriptional regulator | - |
| J6O46_RS24920 (J6O46_24820) | 103992..105392 | - | 1401 | WP_001515710.1 | sucrose-6-phosphate hydrolase | - |
| J6O46_RS24925 (J6O46_24825) | 105392..106762 | - | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| J6O46_RS24930 (J6O46_24830) | 106900..108417 | - | 1518 | WP_000488917.1 | carbohydrate porin | - |
| J6O46_RS24935 (J6O46_24835) | 108583..109506 | - | 924 | WP_000992320.1 | aminoimidazole riboside kinase | - |
| J6O46_RS24940 (J6O46_24840) | 109861..110109 | + | 249 | Protein_93 | IS3 family transposase ISEhe3 | Transposase |
| J6O46_RS24945 (J6O46_24845) | 110161..110865 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O46_RS24950 (J6O46_24850) | 111204..111908 | - | 705 | WP_088765929.1 | IS6 family transposase IS26 | Transposase |
| J6O46_RS24955 (J6O46_24855) | 111974..112921 | + | 948 | Protein_96 | Tn3 family transposase ISEc63 | Transposase |
| J6O46_RS24960 (J6O46_24860) | 113045..113521 | + | 477 | WP_000043177.1 | hypothetical protein | VF |
| J6O46_RS24965 (J6O46_24865) | 113826..114176 | - | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J6O46_RS24970 | 114338..114538 | + | 201 | Protein_99 | hypothetical protein | - |
| J6O46_RS24975 (J6O46_24875) | 114794..115914 | + | 1121 | WP_088765928.1 | IS3 family transposase ISRaq1 | Transposase |
| J6O46_RS24980 (J6O46_24880) | 115982..116401 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O46_RS24985 (J6O46_24885) | 116398..116709 | - | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O46_RS24990 (J6O46_24890) | 116920..117300 | + | 381 | Protein_103 | gluconate permease | - |
| J6O46_RS24995 (J6O46_24895) | 117350..117811 | - | 462 | Protein_104 | lactate utilization protein C | - |
| J6O46_RS25000 (J6O46_24900) | 117876..118580 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O46_RS25005 (J6O46_24905) | 118633..119490 | + | 858 | Protein_106 | APC family permease | - |
| J6O46_RS25010 (J6O46_24910) | 119598..120680 | - | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| J6O46_RS25020 (J6O46_24920) | 121444..121962 | - | 519 | Protein_109 | PLP-dependent aspartate aminotransferase family protein | - |
| J6O46_RS25025 (J6O46_24925) | 122044..123321 | - | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| J6O46_RS25030 (J6O46_24930) | 123669..124310 | - | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| J6O46_RS25035 (J6O46_24935) | 124310..125248 | - | 939 | WP_000449980.1 | MlaD family protein | - |
| J6O46_RS25040 (J6O46_24940) | 125250..126041 | - | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| J6O46_RS25045 (J6O46_24945) | 126047..127192 | - | 1146 | WP_001325018.1 | ABC transporter permease | - |
| J6O46_RS25050 (J6O46_24950) | 127306..127557 | - | 252 | WP_001515736.1 | hypothetical protein | - |
| J6O46_RS25055 (J6O46_24955) | 127616..128320 | + | 705 | WP_016246463.1 | IS6 family transposase IS26 | Transposase |
| J6O46_RS25060 (J6O46_24960) | 128374..129198 | - | 825 | Protein_117 | IS110 family transposase IS1618 | Transposase |
| J6O46_RS25065 (J6O46_24965) | 129359..129757 | - | 399 | WP_001325170.1 | RepA family replication protein | - |
| J6O46_RS25070 (J6O46_24970) | 130182..130751 | + | 570 | WP_001749988.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O46_RS25075 (J6O46_24975) | 131397..131774 | + | 378 | WP_196239799.1 | hypothetical protein | - |
| J6O46_RS25080 (J6O46_24980) | 131819..132556 | + | 738 | WP_009654087.1 | HupE/UreJ family protein | - |
| J6O46_RS25085 (J6O46_24985) | 132570..133259 | + | 690 | WP_029602877.1 | hypothetical protein | - |
| J6O46_RS25090 (J6O46_24990) | 133409..133771 | + | 363 | WP_223610883.1 | hypothetical protein | - |
| J6O46_RS25095 (J6O46_24995) | 133835..134755 | + | 921 | WP_029602875.1 | hypothetical protein | - |
| J6O46_RS25100 (J6O46_25000) | 134809..135567 | + | 759 | WP_029602874.1 | hypothetical protein | - |
| J6O46_RS25105 (J6O46_25005) | 135803..137101 | + | 1299 | WP_029602873.1 | MFS transporter | - |
| J6O46_RS25110 (J6O46_25010) | 137205..137474 | + | 270 | WP_009653703.1 | metal-sensing transcriptional repressor | - |
| J6O46_RS25115 (J6O46_25015) | 137487..138629 | + | 1143 | WP_029602872.1 | nickel/cobalt efflux protein RcnA | - |
| J6O46_RS25120 (J6O46_25020) | 138790..139230 | + | 441 | WP_135695985.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| J6O46_RS25125 (J6O46_25025) | 140817..141347 | - | 531 | WP_020326994.1 | replication initiation protein | - |
| J6O46_RS25130 (J6O46_25030) | 141444..141827 | + | 384 | WP_001201739.1 | transposase | - |
| J6O46_RS25135 (J6O46_25035) | 141824..142171 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| J6O46_RS25140 (J6O46_25040) | 142221..143756 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| J6O46_RS25145 (J6O46_25045) | 143859..143981 | - | 123 | Protein_134 | RepB family plasmid replication initiator protein | - |
| J6O46_RS25150 (J6O46_25050) | 144541..144882 | + | 342 | WP_000057569.1 | antirestriction protein ArdAB regulator ArdK | - |
| J6O46_RS25155 (J6O46_25055) | 144897..145688 | - | 792 | WP_012561121.1 | SprT-like domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|