MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94675 bp
Accession: NZ_CP081721 Location: 1..94675 Organism: Escherichia coli strain CX05 Replicon: plasmid unnamed2
Accession: NZ_CP081721 Location: 1..94675 Organism: Escherichia coli strain CX05 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O38_RS24950 (J6O38_24860) | 717..914 | + | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| J6O38_RS24955 (J6O38_24865) | 1160..1857 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS24960 (J6O38_24870) | 1941..2222 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O38_RS24965 (J6O38_24875) | 2203..2532 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O38_RS24970 (J6O38_24880) | 3578..4600 | - | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| J6O38_RS24975 (J6O38_24885) | 4754..5458 | + | 705 | WP_001572363.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24980 (J6O38_24890) | 5510..5806 | + | 297 | Protein_7 | IS481 family transposase ISAzs36 | Transposase |
| J6O38_RS24985 (J6O38_24895) | 5862..6566 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O38_RS24990 (J6O38_24900) | 6733..6954 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J6O38_RS24995 (J6O38_24905) | 6954..7334 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J6O38_RS25000 (J6O38_24910) | 7339..7518 | + | 180 | WP_001339207.1 | hypothetical protein | - |
| J6O38_RS25005 (J6O38_24915) | 7546..8589 | + | 1044 | WP_054622888.1 | DUF968 domain-containing protein | - |
| J6O38_RS25010 (J6O38_24920) | 8678..9130 | + | 453 | WP_053263817.1 | Late promoter-activating protein | - |
| J6O38_RS25015 (J6O38_24925) | 9216..10139 | + | 924 | Protein_14 | IS6 family transposase IS15 | Transposase |
| J6O38_RS25020 (J6O38_24930) | 10205..10909 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS25025 (J6O38_24935) | 10962..11546 | + | 585 | Protein_16 | Tn3 family transposase ISEc63 | Transposase |
| J6O38_RS25030 (J6O38_24940) | 11582..11827 | + | 246 | Protein_17 | phage antirepressor KilAC domain-containing protein | - |
| J6O38_RS25035 (J6O38_24945) | 11860..12711 | - | 852 | WP_016240427.1 | phage repressor protein C1 | - |
| J6O38_RS25040 (J6O38_24950) | 12822..13031 | - | 210 | WP_016240428.1 | hypothetical protein | - |
| J6O38_RS25045 (J6O38_24955) | 13636..13857 | + | 222 | WP_000542335.1 | hypothetical protein | - |
| J6O38_RS25050 (J6O38_24960) | 13865..14896 | + | 1032 | WP_000067528.1 | site-specific integrase | - |
| J6O38_RS25055 (J6O38_24965) | 14947..15258 | + | 312 | WP_001224247.1 | hypothetical protein | - |
| J6O38_RS25060 | 15500..16056 | + | 557 | Protein_23 | Ref family protein | - |
| J6O38_RS25065 (J6O38_24975) | 16135..16890 | + | 756 | WP_072134454.1 | hypothetical protein | - |
| J6O38_RS25070 (J6O38_24980) | 16944..17402 | - | 459 | WP_223610886.1 | EAL domain-containing protein | - |
| J6O38_RS25075 (J6O38_24985) | 17632..18612 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| J6O38_RS25080 (J6O38_24990) | 18647..19267 | + | 621 | WP_223610885.1 | helix-turn-helix domain-containing protein | - |
| J6O38_RS25085 (J6O38_24995) | 19306..19554 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| J6O38_RS25090 (J6O38_25000) | 19551..19991 | - | 441 | WP_000258162.1 | hypothetical protein | - |
| J6O38_RS25095 (J6O38_25005) | 20025..20189 | - | 165 | WP_000679356.1 | hypothetical protein | - |
| J6O38_RS25100 (J6O38_25010) | 20315..20572 | + | 258 | Protein_31 | IS3 family transposase IS911 | Transposase |
| J6O38_RS25105 (J6O38_25015) | 20640..21110 | + | 471 | Protein_32 | IS30 family transposase IS30D | Transposase |
| J6O38_RS25115 (J6O38_25025) | 22003..22383 | - | 381 | Protein_34 | IS200/IS605 family transposase | - |
| J6O38_RS25125 (J6O38_25035) | 23675..24655 | + | 981 | WP_016240301.1 | IS5 family transposase IS5D | Transposase |
| J6O38_RS25130 (J6O38_25040) | 24764..24967 | - | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| J6O38_RS25135 (J6O38_25045) | 25060..25644 | - | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| J6O38_RS25140 (J6O38_25050) | 25619..27352 | - | 1734 | WP_077947784.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| J6O38_RS25145 (J6O38_25055) | 27562..28314 | + | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| J6O38_RS25150 (J6O38_25060) | 28315..29337 | + | 1023 | WP_016239794.1 | tetrathionate reductase subunit TtrC | - |
| J6O38_RS25155 (J6O38_25065) | 29330..31588 | + | 2259 | Protein_42 | molybdopterin-dependent oxidoreductase | - |
| J6O38_RS25160 (J6O38_25070) | 31641..32345 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O38_RS25165 (J6O38_25075) | 32610..32900 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| J6O38_RS25170 (J6O38_25080) | 32897..33298 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| J6O38_RS25175 (J6O38_25085) | 33288..33644 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| J6O38_RS25180 (J6O38_25090) | 33862..34566 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O38_RS25185 (J6O38_25095) | 34726..35637 | + | 912 | WP_032192052.1 | acetamidase/formamidase family protein | - |
| J6O38_RS25190 (J6O38_25100) | 35634..36977 | + | 1344 | WP_032192047.1 | APC family permease | - |
| J6O38_RS25195 (J6O38_25105) | 38299..39399 | + | 1101 | WP_032192045.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| J6O38_RS25200 (J6O38_25110) | 39480..39731 | - | 252 | WP_105966327.1 | hypothetical protein | - |
| J6O38_RS25205 (J6O38_25115) | 39767..40183 | - | 417 | WP_032192044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O38_RS25210 (J6O38_25120) | 40180..40410 | - | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O38_RS25215 (J6O38_25125) | 41010..41228 | + | 219 | WP_016240352.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| J6O38_RS25220 (J6O38_25130) | 41230..41535 | + | 306 | WP_016240353.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| J6O38_RS25225 (J6O38_25135) | 41705..42720 | + | 1016 | Protein_56 | hypothetical protein | - |
| J6O38_RS25230 (J6O38_25140) | 42918..43712 | + | 795 | WP_016240356.1 | site-specific integrase | - |
| J6O38_RS25240 (J6O38_25150) | 44589..45140 | - | 552 | WP_223610888.1 | hypothetical protein | - |
| J6O38_RS25245 (J6O38_25155) | 46167..46556 | + | 390 | WP_001567989.1 | hypothetical protein | - |
| J6O38_RS25250 (J6O38_25160) | 46738..47742 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| J6O38_RS25255 (J6O38_25165) | 47976..48698 | + | 723 | WP_039022034.1 | hypothetical protein | - |
| J6O38_RS25260 (J6O38_25170) | 48709..49146 | + | 438 | WP_054622800.1 | hypothetical protein | Relaxase |
| J6O38_RS25265 (J6O38_25175) | 49180..49877 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS25270 (J6O38_25180) | 49896..50498 | + | 603 | Protein_65 | phage antirepressor KilAC domain-containing protein | - |
| J6O38_RS25275 (J6O38_25185) | 50662..51462 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| J6O38_RS25280 (J6O38_25190) | 51492..52337 | + | 846 | WP_054622904.1 | helix-turn-helix domain-containing protein | - |
| J6O38_RS25285 (J6O38_25195) | 52672..52827 | + | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| J6O38_RS25290 (J6O38_25200) | 52905..54017 | + | 1113 | WP_001615628.1 | IS4 family transposase IS421 | Transposase |
| J6O38_RS25295 (J6O38_25205) | 54293..54802 | - | 510 | WP_054622924.1 | hypothetical protein | - |
| J6O38_RS25300 (J6O38_25210) | 54814..55278 | - | 465 | WP_223602149.1 | hypothetical protein | - |
| J6O38_RS25305 (J6O38_25215) | 55431..56246 | - | 816 | WP_001514461.1 | hypothetical protein | - |
| J6O38_RS25310 (J6O38_25220) | 56256..57845 | - | 1590 | WP_033546052.1 | hypothetical protein | - |
| J6O38_RS25315 (J6O38_25225) | 57905..59611 | - | 1707 | WP_001514463.1 | hypothetical protein | - |
| J6O38_RS25320 (J6O38_25230) | 59876..60841 | - | 966 | WP_000725192.1 | ParB family protein | - |
| J6O38_RS25325 (J6O38_25235) | 60838..62043 | - | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| J6O38_RS25330 (J6O38_25240) | 62443..63303 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| J6O38_RS25335 (J6O38_25245) | 63621..63959 | - | 339 | WP_061353995.1 | hypothetical protein | - |
| J6O38_RS25340 (J6O38_25250) | 64001..64698 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| J6O38_RS25345 | 65204..65314 | + | 111 | Protein_80 | FlmC family protein | - |
| J6O38_RS25350 (J6O38_25255) | 65262..65381 | + | 120 | WP_223610890.1 | type I toxin-antitoxin system Hok family toxin | - |
| J6O38_RS25355 (J6O38_25260) | 65574..66338 | - | 765 | Protein_82 | IS4 family transposase IS421 | Transposase |
| J6O38_RS25360 (J6O38_25265) | 66392..67096 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O38_RS25365 (J6O38_25270) | 67541..67804 | + | 264 | WP_021243021.1 | hypothetical protein | - |
| J6O38_RS25370 (J6O38_25275) | 67835..68014 | - | 180 | WP_021243020.1 | Rop family plasmid primer RNA-binding protein | - |
| J6O38_RS25375 (J6O38_25280) | 68152..68448 | + | 297 | WP_223610887.1 | entry exclusion protein 1 | - |
| J6O38_RS25380 (J6O38_25285) | 68510..68809 | - | 300 | WP_021243018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O38_RS25385 (J6O38_25290) | 68799..69062 | - | 264 | WP_000072676.1 | hypothetical protein | - |
| J6O38_RS25390 (J6O38_25295) | 69200..69496 | - | 297 | WP_162997146.1 | hypothetical protein | - |
| J6O38_RS25395 (J6O38_25300) | 70201..70695 | - | 495 | WP_021243016.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| J6O38_RS25400 (J6O38_25305) | 70685..71146 | - | 462 | WP_021243015.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| J6O38_RS25405 (J6O38_25310) | 71170..71307 | - | 138 | WP_021243014.1 | hypothetical protein | - |
| J6O38_RS25410 (J6O38_25315) | 71381..71887 | - | 507 | WP_001567380.1 | DUF417 family protein | - |
| J6O38_RS25415 (J6O38_25320) | 71918..72178 | - | 261 | WP_001567381.1 | DUF1471 domain-containing protein | - |
| J6O38_RS25420 (J6O38_25325) | 72391..72948 | - | 558 | WP_001567382.1 | hypothetical protein | VF |
| J6O38_RS25425 (J6O38_25330) | 73045..73311 | - | 267 | WP_001567383.1 | DUF1471 domain-containing protein | - |
| J6O38_RS25430 (J6O38_25335) | 73686..74690 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| J6O38_RS25435 (J6O38_25340) | 74790..75079 | - | 290 | Protein_98 | Tn3 family transposase | - |
| J6O38_RS25440 (J6O38_25345) | 75130..75882 | - | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| J6O38_RS25445 (J6O38_25350) | 76123..76992 | + | 870 | WP_001567390.1 | DMT family transporter | - |
| J6O38_RS25450 (J6O38_25355) | 77126..78349 | + | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J6O38_RS25455 (J6O38_25360) | 78535..79308 | - | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| J6O38_RS25460 (J6O38_25365) | 79374..80075 | - | 702 | WP_020277918.1 | DsbA family oxidoreductase | - |
| J6O38_RS25465 (J6O38_25370) | 80141..81247 | - | 1107 | WP_006687059.1 | alkene reductase | - |
| J6O38_RS25470 (J6O38_25375) | 81461..81790 | + | 330 | WP_002431133.1 | thioredoxin family protein | - |
| J6O38_RS25475 (J6O38_25380) | 81820..82158 | - | 339 | WP_021242988.1 | carboxymuconolactone decarboxylase family protein | - |
| J6O38_RS25480 (J6O38_25385) | 82163..82744 | - | 582 | WP_020277920.1 | HTH-type transcriptional repressor NemR | VF |
| J6O38_RS25485 (J6O38_25390) | 82886..83443 | - | 558 | WP_000108589.1 | OsmC family protein | - |
| J6O38_RS25490 (J6O38_25395) | 83628..84212 | - | 585 | WP_012695450.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| J6O38_RS25495 (J6O38_25400) | 84372..85220 | + | 849 | Protein_110 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| J6O38_RS25500 (J6O38_25405) | 85284..85988 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O38_RS25505 (J6O38_25410) | 86046..87311 | + | 1266 | Protein_112 | Cation efflux system protein CusC | VF |
| J6O38_RS25510 (J6O38_25415) | 87340..87693 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| J6O38_RS25515 (J6O38_25420) | 87807..89099 | + | 1293 | WP_042946269.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| J6O38_RS25520 (J6O38_25425) | 89161..92255 | + | 3095 | Protein_115 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| J6O38_RS25525 (J6O38_25430) | 92341..92781 | + | 441 | WP_001549797.1 | DUF411 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|