MGE detailed information
MGE type: Mobilizable plasmid MGE length: 146658 bp
Accession: NZ_CP081720 Location: 1..146658 Organism: Escherichia coli strain CX05 Replicon: plasmid unnamed1
Accession: NZ_CP081720 Location: 1..146658 Organism: Escherichia coli strain CX05 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O38_RS24255 (J6O38_24180) | 1..438 | - | 438 | Protein_0 | DNA polymerase V subunit UmuC | - |
| J6O38_RS24260 (J6O38_24185) | 438..863 | - | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O38_RS24265 (J6O38_24190) | 1264..2751 | + | 1488 | WP_162536192.1 | group II intron reverse transcriptase/maturase | - |
| J6O38_RS24270 (J6O38_24195) | 2902..3599 | + | 698 | WP_088765925.1 | IS1 family transposase IS1X4 | Transposase |
| J6O38_RS24275 (J6O38_24200) | 3609..3917 | + | 309 | Protein_4 | replication initiation protein | - |
| J6O38_RS24280 (J6O38_24205) | 4597..5622 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| J6O38_RS24285 (J6O38_24210) | 5917..6885 | + | 969 | WP_077633842.1 | IS5 family transposase IS903B | Transposase |
| J6O38_RS24295 (J6O38_24220) | 8362..9054 | - | 693 | WP_001515702.1 | carboxymuconolactone decarboxylase family protein | - |
| J6O38_RS24300 (J6O38_24225) | 9286..10110 | - | 825 | WP_000058769.1 | N-formylglutamate deformylase | - |
| J6O38_RS24305 (J6O38_24230) | 10107..11369 | - | 1263 | WP_001515701.1 | imidazolonepropionase | - |
| J6O38_RS24310 (J6O38_24235) | 11523..12323 | - | 801 | WP_001294851.1 | histidine utilization repressor | - |
| J6O38_RS24315 (J6O38_24240) | 12565..13938 | + | 1374 | WP_001112072.1 | formimidoylglutamate deiminase | - |
| J6O38_RS24320 (J6O38_24245) | 13935..14531 | + | 597 | WP_000148344.1 | HutD family protein | - |
| J6O38_RS24325 (J6O38_24250) | 14770..15756 | + | 987 | WP_000069054.1 | ABC transporter substrate-binding protein | - |
| J6O38_RS24330 (J6O38_24255) | 15768..16649 | + | 882 | WP_001087990.1 | ABC transporter permease | - |
| J6O38_RS24335 (J6O38_24260) | 16649..17434 | + | 786 | WP_000121312.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| J6O38_RS24340 (J6O38_24265) | 17549..19099 | + | 1551 | WP_000741484.1 | histidine ammonia-lyase | - |
| J6O38_RS24345 (J6O38_24270) | 19143..20825 | + | 1683 | WP_000993475.1 | urocanate hydratase | - |
| J6O38_RS24350 (J6O38_24275) | 20884..22050 | + | 1167 | WP_000135555.1 | histidinol-phosphate transaminase | - |
| J6O38_RS24355 (J6O38_24280) | 22047..23204 | + | 1158 | WP_000217345.1 | alpha-hydroxy acid oxidase | - |
| J6O38_RS24360 (J6O38_24285) | 23238..24323 | + | 1086 | WP_001148851.1 | iron-containing alcohol dehydrogenase family protein | - |
| J6O38_RS24365 (J6O38_24290) | 24413..24724 | - | 312 | WP_024191312.1 | hypothetical protein | - |
| J6O38_RS24370 (J6O38_24295) | 24778..25758 | + | 981 | WP_223610879.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24375 (J6O38_24300) | 25906..26898 | - | 993 | WP_001145102.1 | hypothetical protein | - |
| J6O38_RS24380 (J6O38_24305) | 26947..27102 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| J6O38_RS24385 (J6O38_24310) | 27385..28365 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24390 (J6O38_24315) | 28643..28924 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O38_RS24395 (J6O38_24320) | 28905..29234 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O38_RS24400 (J6O38_24325) | 29931..31313 | - | 1383 | WP_000426307.1 | diguanylate cyclase | - |
| J6O38_RS24405 (J6O38_24330) | 31512..32216 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24410 (J6O38_24335) | 32281..32511 | + | 231 | Protein_31 | IS5/IS1182 family transposase | - |
| J6O38_RS24420 (J6O38_24345) | 33539..33940 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| J6O38_RS24425 (J6O38_24350) | 33873..34130 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| J6O38_RS24430 (J6O38_24355) | 34223..34876 | - | 654 | WP_000616806.1 | CPBP family intramembrane metalloprotease | - |
| J6O38_RS24435 (J6O38_24360) | 35814..36671 | - | 858 | Protein_36 | incFII family plasmid replication initiator RepA | - |
| J6O38_RS24440 (J6O38_24365) | 36664..36738 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| J6O38_RS24445 (J6O38_24370) | 36973..37230 | - | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| J6O38_RS24450 (J6O38_24375) | 37470..38048 | - | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| J6O38_RS24455 (J6O38_24380) | 38081..38778 | + | 698 | WP_223610878.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS24460 (J6O38_24385) | 38795..39538 | + | 744 | Protein_41 | RNA 3'-terminal phosphate cyclase | - |
| J6O38_RS24465 (J6O38_24390) | 39581..42286 | - | 2706 | WP_016239750.1 | HTH-type transcriptional regulator MalT | VF |
| J6O38_RS24470 (J6O38_24395) | 42615..43312 | + | 698 | WP_223419864.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS24475 (J6O38_24400) | 43465..45597 | - | 2133 | WP_001192442.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| J6O38_RS24480 (J6O38_24405) | 45599..46948 | - | 1350 | WP_000020380.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| J6O38_RS24485 (J6O38_24410) | 46945..47826 | - | 882 | WP_001549866.1 | efflux RND transporter periplasmic adaptor subunit | - |
| J6O38_RS24490 (J6O38_24415) | 47841..49757 | - | 1917 | WP_223596854.1 | TolC family protein | - |
| J6O38_RS24495 (J6O38_24420) | 49837..63216 | - | 13380 | WP_153681168.1 | Ig-like domain-containing protein | - |
| J6O38_RS24500 (J6O38_24425) | 63764..64744 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24505 (J6O38_24430) | 65963..66934 | - | 972 | WP_000817039.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J6O38_RS24510 (J6O38_24435) | 66934..68100 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| J6O38_RS24515 (J6O38_24440) | 68852..69862 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| J6O38_RS24520 (J6O38_24445) | 70579..71319 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| J6O38_RS24525 | 71651..71981 | - | 331 | Protein_54 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O38_RS24530 (J6O38_24450) | 71968..72274 | - | 307 | Protein_55 | type II toxin-antitoxin system ParD family antitoxin | - |
| J6O38_RS24535 (J6O38_24455) | 72465..74138 | - | 1674 | WP_000026497.1 | hypothetical protein | - |
| J6O38_RS24540 (J6O38_24460) | 74368..74505 | - | 138 | WP_223610884.1 | hypothetical protein | - |
| J6O38_RS24545 (J6O38_24465) | 74619..75599 | - | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24550 (J6O38_24470) | 75903..76712 | - | 810 | WP_000654269.1 | hypothetical protein | - |
| J6O38_RS24555 (J6O38_24475) | 76730..77092 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| J6O38_RS24560 (J6O38_24480) | 77276..77698 | - | 423 | WP_162534719.1 | hypothetical protein | - |
| J6O38_RS24565 (J6O38_24485) | 77655..77885 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O38_RS24570 (J6O38_24490) | 77882..78298 | + | 417 | WP_001044765.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O38_RS24575 (J6O38_24495) | 78372..79934 | + | 1563 | WP_001128475.1 | AAA family ATPase | - |
| J6O38_RS24580 (J6O38_24500) | 79919..80941 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| J6O38_RS24590 (J6O38_24510) | 81870..82091 | + | 222 | Protein_67 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24595 (J6O38_24515) | 82192..82557 | - | 366 | WP_001515713.1 | hypothetical protein | - |
| J6O38_RS24600 (J6O38_24520) | 82554..83039 | - | 486 | WP_000045622.1 | conjugative transfer protein MobI(A/C) | - |
| J6O38_RS24605 (J6O38_24525) | 83797..84597 | + | 801 | WP_001515712.1 | hypothetical protein | - |
| J6O38_RS24610 (J6O38_24530) | 84691..85671 | + | 981 | WP_016236303.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O38_RS24615 (J6O38_24535) | 86044..86823 | + | 780 | WP_223196906.1 | DsbA family protein | - |
| J6O38_RS24620 | 86870..86938 | - | 69 | WP_228636870.1 | DUF4113 domain-containing protein | - |
| J6O38_RS24625 (J6O38_24545) | 87398..87619 | + | 222 | WP_001124949.1 | hypothetical protein | - |
| J6O38_RS24630 (J6O38_24550) | 87723..88420 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| J6O38_RS24635 (J6O38_24555) | 88804..89808 | - | 1005 | WP_000851062.1 | LacI family DNA-binding transcriptional regulator | - |
| J6O38_RS24640 (J6O38_24560) | 89838..91238 | - | 1401 | WP_001515710.1 | sucrose-6-phosphate hydrolase | - |
| J6O38_RS24645 (J6O38_24565) | 91238..92608 | - | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| J6O38_RS24650 (J6O38_24570) | 92746..94263 | - | 1518 | WP_000488917.1 | carbohydrate porin | - |
| J6O38_RS24655 (J6O38_24575) | 94429..95352 | - | 924 | WP_000992320.1 | aminoimidazole riboside kinase | - |
| J6O38_RS24660 (J6O38_24580) | 95707..95955 | + | 249 | Protein_81 | IS3 family transposase ISEhe3 | Transposase |
| J6O38_RS24665 (J6O38_24585) | 96007..96711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24670 (J6O38_24590) | 97050..97754 | - | 705 | WP_088765929.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24675 (J6O38_24595) | 97820..98767 | + | 948 | Protein_84 | Tn3 family transposase ISEc63 | Transposase |
| J6O38_RS24680 (J6O38_24600) | 98891..99367 | + | 477 | WP_000043177.1 | hypothetical protein | VF |
| J6O38_RS24685 (J6O38_24605) | 99672..100022 | - | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J6O38_RS24690 | 100184..100384 | + | 201 | Protein_87 | hypothetical protein | - |
| J6O38_RS24695 (J6O38_24615) | 100640..101760 | + | 1121 | WP_088765928.1 | IS3 family transposase ISRaq1 | Transposase |
| J6O38_RS24700 (J6O38_24620) | 101828..102247 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6O38_RS24705 (J6O38_24625) | 102244..102555 | - | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6O38_RS24710 (J6O38_24630) | 102766..103146 | + | 381 | Protein_91 | gluconate permease | - |
| J6O38_RS24715 (J6O38_24635) | 103196..103657 | - | 462 | Protein_92 | lactate utilization protein C | - |
| J6O38_RS24720 (J6O38_24640) | 103722..104426 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24725 (J6O38_24645) | 104479..105336 | + | 858 | Protein_94 | APC family permease | - |
| J6O38_RS24730 (J6O38_24650) | 105444..106526 | - | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| J6O38_RS24740 (J6O38_24660) | 107290..107808 | - | 519 | Protein_97 | PLP-dependent aspartate aminotransferase family protein | - |
| J6O38_RS24745 (J6O38_24665) | 107890..109167 | - | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| J6O38_RS24750 (J6O38_24670) | 109515..110156 | - | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| J6O38_RS24755 (J6O38_24675) | 110156..111094 | - | 939 | WP_000449980.1 | MlaD family protein | - |
| J6O38_RS24760 (J6O38_24680) | 111096..111887 | - | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| J6O38_RS24765 (J6O38_24685) | 111893..113038 | - | 1146 | WP_001325018.1 | ABC transporter permease | - |
| J6O38_RS24770 (J6O38_24690) | 113152..113403 | - | 252 | WP_001515736.1 | hypothetical protein | - |
| J6O38_RS24775 (J6O38_24695) | 113462..114166 | + | 705 | WP_016246463.1 | IS6 family transposase IS26 | Transposase |
| J6O38_RS24780 (J6O38_24700) | 114220..115044 | - | 825 | Protein_105 | IS110 family transposase IS1618 | Transposase |
| J6O38_RS24785 (J6O38_24705) | 115205..115603 | - | 399 | WP_001325170.1 | RepA family replication protein | - |
| J6O38_RS24790 (J6O38_24710) | 116028..116597 | + | 570 | WP_001749988.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O38_RS24795 (J6O38_24715) | 117243..117620 | + | 378 | WP_196239799.1 | hypothetical protein | - |
| J6O38_RS24800 (J6O38_24720) | 117665..118402 | + | 738 | WP_009654087.1 | HupE/UreJ family protein | - |
| J6O38_RS24805 (J6O38_24725) | 118416..119105 | + | 690 | WP_029602877.1 | hypothetical protein | - |
| J6O38_RS24810 (J6O38_24730) | 119255..119617 | + | 363 | WP_223610883.1 | hypothetical protein | - |
| J6O38_RS24815 (J6O38_24735) | 119681..120601 | + | 921 | WP_029602875.1 | hypothetical protein | - |
| J6O38_RS24820 (J6O38_24740) | 120655..121413 | + | 759 | WP_029602874.1 | hypothetical protein | - |
| J6O38_RS24825 (J6O38_24745) | 121649..122947 | + | 1299 | WP_029602873.1 | MFS transporter | - |
| J6O38_RS24830 (J6O38_24750) | 123051..123320 | + | 270 | WP_009653703.1 | metal-sensing transcriptional repressor | - |
| J6O38_RS24835 (J6O38_24755) | 123333..124475 | + | 1143 | WP_029602872.1 | nickel/cobalt efflux protein RcnA | - |
| J6O38_RS24840 (J6O38_24760) | 124636..125076 | + | 441 | WP_135695985.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| J6O38_RS24845 (J6O38_24765) | 126663..127403 | - | 741 | WP_223610882.1 | replication initiation protein | - |
| J6O38_RS24850 (J6O38_24770) | 127290..127673 | + | 384 | WP_001201739.1 | transposase | - |
| J6O38_RS24855 (J6O38_24775) | 127670..128017 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| J6O38_RS24860 (J6O38_24780) | 128067..129602 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| J6O38_RS24865 (J6O38_24785) | 129705..129827 | - | 123 | Protein_122 | RepB family plasmid replication initiator protein | - |
| J6O38_RS24870 (J6O38_24790) | 130387..130728 | + | 342 | WP_000057569.1 | antirestriction protein ArdAB regulator ArdK | - |
| J6O38_RS24875 (J6O38_24795) | 130743..131534 | - | 792 | WP_012561121.1 | SprT-like domain-containing protein | - |
| J6O38_RS24880 (J6O38_24800) | 131685..132515 | - | 831 | Protein_125 | translesion error-prone DNA polymerase V subunit MucB | - |
| J6O38_RS24885 (J6O38_24805) | 132605..133942 | + | 1338 | WP_061301087.1 | site-specific integrase | - |
| J6O38_RS24890 | 133939..135090 | + | 1152 | WP_223631571.1 | hypothetical protein | - |
| J6O38_RS24895 | 135051..136721 | + | 1671 | WP_223631572.1 | site-specific integrase | - |
| J6O38_RS24900 | 136724..136870 | + | 147 | WP_223631573.1 | hypothetical protein | - |
| J6O38_RS24905 (J6O38_24815) | 136890..137336 | + | 447 | WP_061301085.1 | hypothetical protein | - |
| J6O38_RS24910 (J6O38_24820) | 137352..138613 | - | 1262 | Protein_131 | translesion error-prone DNA polymerase V subunit UmuC | - |
| J6O38_RS24915 (J6O38_24825) | 138616..139035 | - | 420 | WP_061301088.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| J6O38_RS24920 (J6O38_24830) | 139245..139484 | + | 240 | WP_061301084.1 | hypothetical protein | - |
| J6O38_RS24925 (J6O38_24835) | 139640..141463 | + | 1824 | WP_061301083.1 | AAA family ATPase | - |
| J6O38_RS24930 (J6O38_24840) | 141465..143360 | + | 1896 | WP_061301082.1 | ATP-dependent helicase | - |
| J6O38_RS24935 (J6O38_24845) | 143773..145131 | + | 1359 | WP_061301081.1 | hypothetical protein | - |
| J6O38_RS24940 (J6O38_24850) | 145362..146453 | - | 1092 | WP_061301080.1 | DUF2442 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|