MGE detailed information
MGE type: Mobilizable plasmid MGE length: 74799 bp
Accession: NZ_CP081712 Location: 1..74799 Organism: Escherichia coli strain AH21 Replicon: plasmid unnamed1
Accession: NZ_CP081712 Location: 1..74799 Organism: Escherichia coli strain AH21 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O42_RS22935 (J6O42_22840) | 811..1773 | - | 963 | WP_000952529.1 | LysR family transcriptional regulator | - |
| J6O42_RS22940 (J6O42_22845) | 2112..3143 | + | 1032 | WP_001327073.1 | ABC transporter substrate-binding protein | - |
| J6O42_RS22945 (J6O42_22850) | 3209..4063 | + | 855 | WP_000197183.1 | ABC transporter permease | - |
| J6O42_RS22950 (J6O42_22855) | 4065..4883 | + | 819 | WP_000198590.1 | ABC transporter permease | - |
| J6O42_RS22955 (J6O42_22860) | 5014..6264 | + | 1251 | WP_000110060.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| J6O42_RS22960 (J6O42_22865) | 6337..7500 | + | 1164 | WP_001471748.1 | alpha-hydroxy acid oxidase | - |
| J6O42_RS22965 (J6O42_22870) | 7624..8454 | - | 831 | Protein_7 | hypothetical protein | - |
| J6O42_RS22970 (J6O42_22875) | 8756..9283 | - | 528 | Protein_8 | hypothetical protein | - |
| J6O42_RS22975 (J6O42_22880) | 9340..10037 | + | 698 | WP_112871921.1 | IS1 family transposase IS1R | Transposase |
| J6O42_RS22980 (J6O42_22885) | 10054..10245 | + | 192 | Protein_10 | transposase | - |
| J6O42_RS22985 (J6O42_22890) | 10279..10809 | - | 531 | WP_032182520.1 | hypothetical protein | - |
| J6O42_RS22990 | 11984..12235 | + | 252 | WP_244584807.1 | conjugative transfer protein MobI(A/C) | - |
| J6O42_RS22995 (J6O42_22900) | 12232..12954 | + | 723 | WP_000133023.1 | hypothetical protein | - |
| J6O42_RS23000 (J6O42_22905) | 12965..13927 | + | 963 | WP_001011145.1 | hypothetical protein | Relaxase |
| J6O42_RS23005 (J6O42_22910) | 13956..14632 | + | 677 | WP_223597215.1 | IS1 family transposase IS1R | Transposase |
| J6O42_RS23010 (J6O42_22915) | 14615..15086 | - | 472 | Protein_16 | IS30-like element IS30 family transposase | - |
| J6O42_RS23015 (J6O42_22920) | 15154..15411 | - | 258 | Protein_17 | IS3 family transposase IS911 | Transposase |
| J6O42_RS23020 (J6O42_22925) | 15537..15701 | + | 165 | WP_000679356.1 | hypothetical protein | - |
| J6O42_RS23025 (J6O42_22930) | 15735..16175 | + | 441 | WP_000258163.1 | hypothetical protein | - |
| J6O42_RS23030 (J6O42_22935) | 16172..16420 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| J6O42_RS23035 (J6O42_22940) | 16459..16707 | - | 249 | Protein_21 | helix-turn-helix domain-containing protein | - |
| J6O42_RS23040 (J6O42_22945) | 16768..17465 | + | 698 | WP_112871921.1 | IS1 family transposase IS1R | Transposase |
| J6O42_RS23045 (J6O42_22950) | 17681..18829 | - | 1149 | WP_000705120.1 | galactonate dehydratase | - |
| J6O42_RS23050 (J6O42_22955) | 18826..19443 | - | 618 | WP_001198679.1 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | - |
| J6O42_RS23055 (J6O42_22960) | 19427..20305 | - | 879 | WP_000204077.1 | 2-dehydro-3-deoxygalactonokinase | - |
| J6O42_RS23060 (J6O42_22965) | 20302..20991 | - | 690 | WP_000156556.1 | D-galactonate utilization transcriptional regulator DgoR | - |
| J6O42_RS23065 (J6O42_22970) | 21559..21750 | - | 192 | Protein_27 | HAD hydrolase family protein | - |
| J6O42_RS23070 (J6O42_22975) | 21744..22001 | - | 258 | Protein_28 | transposase | - |
| J6O42_RS23075 (J6O42_22980) | 22001..22150 | + | 150 | Protein_29 | theronine dehydrogenase | - |
| J6O42_RS23080 (J6O42_22985) | 22206..22903 | + | 698 | WP_223369285.1 | IS1 family transposase IS1A | Transposase |
| J6O42_RS23085 (J6O42_22990) | 22922..23767 | + | 846 | Protein_31 | IS3 family transposase IS911 | Transposase |
| J6O42_RS23090 (J6O42_22995) | 24219..25190 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J6O42_RS23095 (J6O42_23000) | 25190..26356 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| J6O42_RS23100 (J6O42_23005) | 27097..28107 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| J6O42_RS23105 (J6O42_23010) | 28301..29269 | + | 969 | WP_162535732.1 | IS5 family transposase IS903B | Transposase |
| J6O42_RS23110 (J6O42_23015) | 29329..29997 | - | 669 | Protein_36 | IS6 family transposase IS15DI | Transposase |
| J6O42_RS23115 | 29902..30216 | + | 315 | WP_000611239.1 | hypothetical protein | - |
| J6O42_RS23120 (J6O42_23020) | 30414..30569 | + | 156 | WP_000075580.1 | hypothetical protein | - |
| J6O42_RS23125 (J6O42_23025) | 30618..31610 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| J6O42_RS23130 (J6O42_23030) | 31667..31798 | + | 132 | Protein_40 | hypothetical protein | VF |
| J6O42_RS23135 (J6O42_23035) | 31795..32406 | - | 612 | WP_000176305.1 | DUF2913 family protein | - |
| J6O42_RS23140 (J6O42_23040) | 32460..32741 | - | 282 | WP_001261567.1 | hypothetical protein | - |
| J6O42_RS23145 (J6O42_23045) | 32923..33198 | + | 276 | WP_223597216.1 | C2H2-type zinc finger protein | - |
| J6O42_RS23150 (J6O42_23050) | 33195..33428 | - | 234 | Protein_44 | IS3 family transposase ISEhe3 | Transposase |
| J6O42_RS23160 (J6O42_23060) | 34779..34922 | - | 144 | Protein_46 | IS3 family transposase ISEhe3 | Transposase |
| J6O42_RS23165 (J6O42_23065) | 34986..35309 | - | 324 | Protein_47 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| J6O42_RS23170 (J6O42_23070) | 35492..35713 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J6O42_RS23175 (J6O42_23075) | 35713..36093 | + | 381 | WP_001694510.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J6O42_RS23180 (J6O42_23080) | 36098..36277 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| J6O42_RS23185 (J6O42_23085) | 36305..37348 | + | 1044 | WP_000648832.1 | DUF968 domain-containing protein | - |
| J6O42_RS23190 (J6O42_23090) | 37437..37889 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| J6O42_RS23195 (J6O42_23095) | 37975..39168 | + | 1194 | WP_000219610.1 | hypothetical protein | - |
| J6O42_RS23200 (J6O42_23100) | 39168..40652 | + | 1485 | WP_000124150.1 | terminase | - |
| J6O42_RS23205 (J6O42_23105) | 40677..41528 | - | 852 | WP_000611663.1 | phage repressor protein C1 | - |
| J6O42_RS23210 (J6O42_23110) | 41639..41848 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| J6O42_RS23215 (J6O42_23115) | 42036..43018 | + | 983 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O42_RS23220 (J6O42_23120) | 43372..45798 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| J6O42_RS23225 (J6O42_23125) | 45812..46438 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| J6O42_RS23230 (J6O42_23130) | 46431..47207 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| J6O42_RS23235 (J6O42_23135) | 47262..47858 | + | 597 | WP_001139856.1 | Tat proofreading chaperone DmsD | - |
| J6O42_RS23240 (J6O42_23140) | 47888..48385 | + | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| J6O42_RS23245 (J6O42_23145) | 48610..49590 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O42_RS23250 (J6O42_23150) | 50219..50440 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| J6O42_RS23255 (J6O42_23155) | 50448..51479 | + | 1032 | WP_001471764.1 | site-specific integrase | - |
| J6O42_RS23260 (J6O42_23160) | 51530..51841 | + | 312 | WP_001224243.1 | hypothetical protein | - |
| J6O42_RS23265 (J6O42_23165) | 52089..52391 | + | 303 | Protein_67 | Ref family protein | - |
| J6O42_RS23270 (J6O42_23170) | 52424..55078 | - | 2655 | Protein_68 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| J6O42_RS23275 (J6O42_23175) | 55135..55718 | + | 584 | Protein_69 | IS1 family transposase | - |
| J6O42_RS23280 (J6O42_23180) | 55736..56758 | + | 1023 | Protein_70 | IS30 family transposase IS30D | Transposase |
| J6O42_RS23425 (J6O42_23185) | 56801..57214 | + | 414 | WP_242426044.1 | IS30 family transposase IS30D | Transposase |
| J6O42_RS23285 (J6O42_23190) | 57308..58363 | + | 1056 | WP_001493054.1 | Dyp-type peroxidase | - |
| J6O42_RS23290 (J6O42_23195) | 58365..59171 | + | 807 | WP_001061052.1 | family 1 encapsulin nanocompartment shell protein | - |
| J6O42_RS23295 (J6O42_23200) | 59223..60074 | - | 852 | WP_000159625.1 | RNA polymerase sigma factor RpoH | - |
| J6O42_RS23300 (J6O42_23205) | 60673..60674 | - | 2 | WP_001743396.1 | IS1 family transposase IS1A | Transposase |
| J6O42_RS23305 (J6O42_23210) | 60973..62028 | + | 1056 | Protein_76 | FAD-dependent oxidoreductase | - |
| J6O42_RS23310 (J6O42_23215) | 62235..62932 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| J6O42_RS23315 (J6O42_23220) | 63033..63314 | - | 282 | WP_000639435.1 | hypothetical protein | - |
| J6O42_RS23320 (J6O42_23225) | 63463..63708 | + | 246 | WP_163396968.1 | hypothetical protein | - |
| J6O42_RS23325 (J6O42_23230) | 63766..64554 | - | 789 | WP_001063461.1 | site-specific integrase | - |
| J6O42_RS23330 (J6O42_23235) | 64574..65245 | - | 672 | WP_000796235.1 | hypothetical protein | - |
| J6O42_RS23335 (J6O42_23240) | 66179..66409 | + | 231 | WP_001261275.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O42_RS23340 (J6O42_23245) | 66406..66822 | + | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O42_RS23345 (J6O42_23250) | 67073..68119 | + | 1047 | WP_032182506.1 | IS481 family transposase ISKpn28 | Transposase |
| J6O42_RS23350 (J6O42_23255) | 68111..68680 | - | 570 | Protein_85 | IS5 family transposase IS903B | Transposase |
| J6O42_RS23355 (J6O42_23260) | 68992..69426 | + | 435 | WP_000103648.1 | RidA family protein | - |
| J6O42_RS23360 (J6O42_23265) | 69431..70105 | + | 675 | WP_000175734.1 | DUF1028 domain-containing protein | - |
| J6O42_RS23365 (J6O42_23270) | 70121..71278 | + | 1158 | WP_000633254.1 | acetylornithine deacetylase | - |
| J6O42_RS23370 (J6O42_23275) | 71449..72597 | + | 1149 | WP_000252877.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| J6O42_RS23375 (J6O42_23280) | 72616..73599 | + | 984 | WP_001471744.1 | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC | VF |
| J6O42_RS23380 (J6O42_23285) | 73596..74210 | + | 615 | WP_000983413.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| J6O42_RS23385 (J6O42_23290) | 74223..74672 | + | 450 | WP_000082700.1 | type II 3-dehydroquinate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|