MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90661 bp
Accession: NZ_CP081308 Location: 1..90661 Organism: Escherichia coli strain Ec1079 Replicon: plasmid pEc1079_2
Accession: NZ_CP081308 Location: 1..90661 Organism: Escherichia coli strain Ec1079 Replicon: plasmid pEc1079_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5A55_RS23815 (K5A55_23815) | 768..1142 | + | 375 | WP_032220997.1 | hypothetical protein | - |
| K5A55_RS23820 (K5A55_23820) | 1139..2569 | + | 1431 | WP_221582566.1 | baseplate protein | - |
| K5A55_RS23825 (K5A55_23825) | 2580..3425 | + | 846 | WP_088543541.1 | phage tail protein | - |
| K5A55_RS23830 (K5A55_23830) | 3520..3966 | + | 447 | WP_208972564.1 | phage tail protein | - |
| K5A55_RS24960 | 3969..7091 | + | 3123 | WP_260420031.1 | tail fiber protein | - |
| K5A55_RS23840 (K5A55_23840) | 7094..7327 | + | 234 | WP_001619155.1 | hypothetical protein | - |
| K5A55_RS23845 (K5A55_23845) | 7308..7718 | - | 411 | WP_221582567.1 | tail fiber assembly protein | - |
| K5A55_RS23850 (K5A55_23850) | 8045..8155 | - | 111 | Protein_8 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| K5A55_RS23855 (K5A55_23855) | 8261..8587 | + | 327 | WP_000457140.1 | holin | - |
| K5A55_RS23860 (K5A55_23860) | 8587..9033 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| K5A55_RS23865 (K5A55_23865) | 9023..9643 | + | 621 | WP_000066532.1 | hypothetical protein | - |
| K5A55_RS23870 (K5A55_23870) | 9636..11561 | + | 1926 | WP_198452707.1 | head protein | - |
| K5A55_RS23875 (K5A55_23875) | 11561..11929 | + | 369 | WP_000156174.1 | hypothetical protein | - |
| K5A55_RS23880 (K5A55_23880) | 12065..13450 | + | 1386 | WP_221582568.1 | hypothetical protein | - |
| K5A55_RS23885 (K5A55_23885) | 13515..15197 | + | 1683 | WP_000201468.1 | portal protein | - |
| K5A55_RS23890 (K5A55_23890) | 15211..16209 | + | 999 | WP_001191132.1 | hypothetical protein | - |
| K5A55_RS23895 (K5A55_23895) | 16410..17372 | + | 963 | WP_221582569.1 | lytic replication protein | - |
| K5A55_RS23900 (K5A55_23900) | 17786..18010 | + | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| K5A55_RS23905 (K5A55_23905) | 18010..18717 | + | 708 | WP_221582570.1 | Rha family transcriptional regulator | - |
| K5A55_RS23910 (K5A55_23910) | 18717..18914 | + | 198 | WP_001344836.1 | hypothetical protein | - |
| K5A55_RS23915 (K5A55_23915) | 18947..19432 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| K5A55_RS23920 (K5A55_23920) | 19584..26420 | + | 6837 | WP_221582571.1 | SNF2-related protein | - |
| K5A55_RS23925 (K5A55_23925) | 26457..26891 | + | 435 | WP_080193676.1 | olxA | - |
| K5A55_RS23930 (K5A55_23930) | 26894..27154 | + | 261 | WP_069903364.1 | hypothetical protein | - |
| K5A55_RS23935 (K5A55_23935) | 27477..27785 | + | 309 | WP_001350898.1 | VRR-NUC domain-containing protein | - |
| K5A55_RS23940 (K5A55_23940) | 27800..28000 | + | 201 | WP_001238268.1 | hypothetical protein | - |
| K5A55_RS23945 (K5A55_23945) | 28410..29618 | + | 1209 | WP_221582572.1 | DivIVA domain-containing protein | - |
| K5A55_RS23970 (K5A55_23970) | 32331..32549 | + | 219 | Protein_28 | SPFH/Band 7/PHB domain protein | - |
| K5A55_RS23980 (K5A55_23980) | 33851..34288 | + | 438 | Protein_30 | SPFH domain-containing protein | - |
| K5A55_RS23985 (K5A55_23985) | 34657..35232 | + | 576 | WP_000928280.1 | hypothetical protein | - |
| K5A55_RS24965 | 35439..35624 | + | 186 | WP_001130998.1 | hypothetical protein | - |
| K5A55_RS23995 (K5A55_23995) | 35733..36125 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| K5A55_RS24000 (K5A55_24000) | 36122..37486 | + | 1365 | WP_001557740.1 | hypothetical protein | - |
| K5A55_RS24005 (K5A55_24005) | 37486..38994 | + | 1509 | WP_112024733.1 | terminase | - |
| K5A55_RS24010 (K5A55_24010) | 39023..40060 | - | 1038 | WP_221582573.1 | phage repressor protein | - |
| K5A55_RS24015 (K5A55_24015) | 40457..41485 | + | 1029 | WP_221582574.1 | tyrosine-type recombinase/integrase | - |
| K5A55_RS24020 (K5A55_24020) | 41559..41903 | + | 345 | WP_260420032.1 | hypothetical protein | - |
| K5A55_RS24025 (K5A55_24025) | 41900..42376 | + | 477 | WP_221582575.1 | hypothetical protein | - |
| K5A55_RS24030 (K5A55_24030) | 42373..42867 | + | 495 | WP_000640907.1 | dUTP diphosphatase | - |
| K5A55_RS24035 (K5A55_24035) | 42882..43559 | + | 678 | WP_114447223.1 | DUF2829 domain-containing protein | - |
| K5A55_RS24040 (K5A55_24040) | 43566..44342 | + | 777 | WP_000432096.1 | hypothetical protein | - |
| K5A55_RS24045 (K5A55_24045) | 44375..44572 | - | 198 | WP_221582576.1 | PdcA protein | - |
| K5A55_RS24050 (K5A55_24050) | 44577..44957 | - | 381 | WP_074470340.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K5A55_RS24055 (K5A55_24055) | 44957..45178 | - | 222 | WP_001190708.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| K5A55_RS24060 (K5A55_24060) | 45287..45709 | - | 423 | WP_000098854.1 | hypothetical protein | - |
| K5A55_RS24065 (K5A55_24065) | 45844..46233 | - | 390 | WP_000506729.1 | S24 family peptidase | - |
| K5A55_RS24070 (K5A55_24070) | 46293..46391 | - | 99 | Protein_48 | DNA polymerase III subunit theta | - |
| K5A55_RS24970 | 46424..46774 | + | 351 | WP_001436207.1 | hypothetical protein | - |
| K5A55_RS24080 (K5A55_24080) | 46759..47043 | - | 285 | WP_221582548.1 | antitoxin PHD | - |
| K5A55_RS24085 (K5A55_24085) | 47027..48049 | - | 1023 | WP_221582549.1 | hypothetical protein | - |
| K5A55_RS24090 (K5A55_24090) | 48060..48323 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| K5A55_RS24095 (K5A55_24095) | 48325..48519 | - | 195 | WP_000224731.1 | hypothetical protein | - |
| K5A55_RS24100 (K5A55_24100) | 48521..49246 | - | 726 | WP_221582550.1 | ead/Ea22-like family protein | - |
| K5A55_RS24105 (K5A55_24105) | 49243..49482 | - | 240 | WP_000476201.1 | hypothetical protein | - |
| K5A55_RS24110 (K5A55_24110) | 49475..49678 | - | 204 | WP_000158003.1 | hypothetical protein | - |
| K5A55_RS24115 (K5A55_24115) | 49762..50442 | - | 681 | WP_000664380.1 | hypothetical protein | - |
| K5A55_RS24120 (K5A55_24120) | 50459..51412 | - | 954 | WP_260420028.1 | DUF968 domain-containing protein | - |
| K5A55_RS24125 (K5A55_24125) | 51553..52245 | - | 693 | WP_221582552.1 | metallophosphoesterase | - |
| K5A55_RS24130 (K5A55_24130) | 52242..52553 | - | 312 | WP_221582553.1 | hypothetical protein | - |
| K5A55_RS24135 (K5A55_24135) | 52550..52774 | - | 225 | WP_000139730.1 | hypothetical protein | - |
| K5A55_RS24140 (K5A55_24140) | 52771..53046 | - | 276 | WP_001018059.1 | DUF4752 family protein | - |
| K5A55_RS24145 (K5A55_24145) | 53043..53822 | - | 780 | WP_221582578.1 | hypothetical protein | - |
| K5A55_RS24150 (K5A55_24150) | 53819..54181 | - | 363 | WP_221582554.1 | ClpX C4-type zinc finger protein | - |
| K5A55_RS24155 (K5A55_24155) | 54171..54455 | - | 285 | WP_221582555.1 | DNA-binding protein | - |
| K5A55_RS24160 (K5A55_24160) | 54485..55093 | - | 609 | WP_260420029.1 | DUF4406 domain-containing protein | - |
| K5A55_RS24165 (K5A55_24165) | 55108..55263 | - | 156 | WP_157775912.1 | hypothetical protein | - |
| K5A55_RS24170 (K5A55_24170) | 55381..55959 | + | 579 | WP_096850673.1 | Ref family recombination enhancement nuclease | - |
| K5A55_RS24175 (K5A55_24175) | 56099..56257 | + | 159 | WP_221582557.1 | hypothetical protein | - |
| K5A55_RS24180 (K5A55_24180) | 56291..56458 | + | 168 | WP_000218501.1 | hypothetical protein | - |
| K5A55_RS24185 (K5A55_24185) | 56634..56753 | + | 120 | WP_071526433.1 | ash family protein | - |
| K5A55_RS24190 (K5A55_24190) | 56772..56987 | + | 216 | WP_000201263.1 | host cell division inhibitor Icd-like protein | - |
| K5A55_RS24195 (K5A55_24195) | 56987..57913 | + | 927 | WP_096850672.1 | Rha family transcriptional regulator | - |
| K5A55_RS24200 (K5A55_24200) | 57973..58257 | + | 285 | WP_000717722.1 | hypothetical protein | - |
| K5A55_RS24205 (K5A55_24205) | 58394..58753 | + | 360 | WP_157704636.1 | hypothetical protein | - |
| K5A55_RS24210 (K5A55_24210) | 58793..59614 | - | 822 | WP_001427910.1 | hypothetical protein | - |
| K5A55_RS24215 (K5A55_24215) | 59961..60614 | + | 654 | WP_221582558.1 | maturation control protein | - |
| K5A55_RS24220 (K5A55_24220) | 60943..61272 | + | 330 | WP_000542383.1 | hypothetical protein | - |
| K5A55_RS24225 (K5A55_24225) | 61265..62458 | + | 1194 | WP_097433648.1 | phage tail protein | - |
| K5A55_RS24230 (K5A55_24230) | 62492..63220 | - | 729 | WP_032220985.1 | hypothetical protein | - |
| K5A55_RS24235 (K5A55_24235) | 63257..63442 | - | 186 | Protein_81 | hypothetical protein | - |
| K5A55_RS24240 (K5A55_24240) | 63499..63837 | - | 339 | WP_032220986.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| K5A55_RS24245 (K5A55_24245) | 63909..64211 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5A55_RS24250 (K5A55_24250) | 64374..65165 | + | 792 | WP_221582559.1 | phage tail protein | - |
| K5A55_RS24255 (K5A55_24255) | 65162..65929 | + | 768 | WP_000203293.1 | hypothetical protein | - |
| K5A55_RS24260 (K5A55_24260) | 65933..66913 | + | 981 | WP_000046500.1 | hypothetical protein | - |
| K5A55_RS24265 (K5A55_24265) | 66910..67563 | + | 654 | WP_221582560.1 | carbohydrate-binding domain-containing protein | - |
| K5A55_RS24270 (K5A55_24270) | 67623..68528 | + | 906 | WP_032220988.1 | recombination-associated protein RdgC | - |
| K5A55_RS24275 (K5A55_24275) | 68542..69192 | + | 651 | WP_169781366.1 | hypothetical protein | - |
| K5A55_RS24280 (K5A55_24280) | 69272..70090 | + | 819 | Protein_90 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| K5A55_RS24285 (K5A55_24285) | 70139..71800 | - | 1662 | WP_069067288.1 | glutamine--tRNA ligase | - |
| K5A55_RS24290 (K5A55_24290) | 72069..72356 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| K5A55_RS24295 (K5A55_24295) | 72349..72990 | - | 642 | WP_000585022.1 | AAA family ATPase | - |
| K5A55_RS24300 (K5A55_24300) | 73278..73616 | - | 339 | WP_000076909.1 | plasmid partitioning/stability family protein | - |
| K5A55_RS24305 (K5A55_24305) | 73630..74586 | - | 957 | WP_221582561.1 | plasmid segregation protein ParM | - |
| K5A55_RS24310 (K5A55_24310) | 74853..75137 | + | 285 | WP_221582562.1 | PAAR domain-containing protein | - |
| K5A55_RS24315 (K5A55_24315) | 75137..75940 | + | 804 | WP_221582563.1 | hypothetical protein | - |
| K5A55_RS24320 (K5A55_24320) | 76011..76469 | + | 459 | WP_221582564.1 | hypothetical protein | - |
| K5A55_RS24325 (K5A55_24325) | 76623..77081 | - | 459 | WP_000020026.1 | hypothetical protein | - |
| K5A55_RS24330 (K5A55_24330) | 77098..77490 | - | 393 | WP_000331486.1 | hypothetical protein | - |
| K5A55_RS24335 (K5A55_24335) | 77649..79346 | + | 1698 | WP_193768285.1 | capsid protein | - |
| K5A55_RS24340 (K5A55_24340) | 79493..79771 | + | 279 | WP_069067290.1 | Ig-like domain-containing protein | - |
| K5A55_RS24345 (K5A55_24345) | 79839..81497 | + | 1659 | WP_193768286.1 | phage tail protein | - |
| K5A55_RS24350 (K5A55_24350) | 81541..82275 | + | 735 | WP_000801017.1 | hypothetical protein | - |
| K5A55_RS24355 (K5A55_24355) | 82367..82915 | + | 549 | WP_000870304.1 | hypothetical protein | - |
| K5A55_RS24360 (K5A55_24360) | 82924..83415 | + | 492 | WP_000012429.1 | hypothetical protein | - |
| K5A55_RS24365 (K5A55_24365) | 83468..84019 | + | 552 | WP_221582565.1 | hypothetical protein | - |
| K5A55_RS24370 (K5A55_24370) | 84035..84742 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| K5A55_RS24375 (K5A55_24375) | 85124..85879 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| K5A55_RS24380 (K5A55_24380) | 86268..87089 | + | 822 | WP_072756847.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|