MGE detailed information
MGE type: Genomic_island MGE length: 45954 bp
Accession: NZ_CP081008 Location: 3030180..3076133 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Accession: NZ_CP081008 Location: 3030180..3076133 Organism: Escherichia coli strain XL10-gold-ultracompetent Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3831_RS14370 (3026547) | 3026547..3027608 | + | 1062 | WP_000550695.1 | YncE family protein | - |
| K3831_RS14375 (3027721) | 3027721..3029220 | - | 1500 | WP_001300590.1 | L-asparagine permease | - |
| K3831_RS14380 (3029487) | 3029487..3030104 | + | 618 | WP_000598857.1 | glutathione S-transferase family protein | - |
| K3831_RS14385 (3030180) | 3030180..3030392 | + | 213 | WP_000226995.1 | YncH family protein | - |
| K3831_RS14390 (3031142) | 3031142..3031477 | + | 336 | Protein_2843 | Protein RhsD | VF |
| K3831_RS14395 (3031534) | 3031534..3032070 | - | 537 | Protein_2844 | CDP-alcohol phosphatidyltransferase family protein | - |
| K3831_RS14400 (3032241) | 3032241..3034547 | - | 2307 | WP_000910026.1 | DUF2773 domain-containing bactofilin | - |
| K3831_RS14405 (3034610) | 3034610..3035470 | - | 861 | WP_000097801.1 | pyridoxine 4-dehydrogenase | - |
| K3831_RS14410 (3035678) | 3035678..3039175 | - | 3498 | Protein_2847 | autotransporter domain-containing protein | - |
| K3831_RS14415 (3039182) | 3039182..3040333 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| K3831_RS14420 (3040401) | 3040401..3040658 | - | 258 | Protein_2849 | IS3 family transposase ISEc52 | Transposase |
| K3831_RS14425 (3040754) | 3040754..3041647 | + | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| K3831_RS14430 (3041976) | 3041976..3042839 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| K3831_RS14435 (3042931) | 3042931..3043752 | + | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| K3831_RS14440 (3043969) | 3043969..3044160 | + | 192 | Protein_2853 | DeoR family transcriptional regulator | - |
| K3831_RS14445 (3044207) | 3044207..3044383 | + | 177 | WP_001285112.1 | hypothetical protein | - |
| K3831_RS14450 (3044383) | 3044383..3044826 | + | 444 | WP_000824223.1 | lipoprotein YafY | - |
| K3831_RS14455 (3044849) | 3044849..3045316 | + | 468 | WP_001547765.1 | protein YkfB | - |
| K3831_RS14460 (3045393) | 3045393..3045632 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| K3831_RS14465 (3045730) | 3045730..3046188 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| K3831_RS14470 (3046204) | 3046204..3046680 | + | 477 | WP_000811693.1 | RadC family protein | - |
| K3831_RS14475 (3046689) | 3046689..3046910 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| K3831_RS14480 (3046929) | 3046929..3047246 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| K3831_RS14485 (3047267) | 3047267..3047608 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| K3831_RS14495 (3048180) | 3048180..3049433 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| K3831_RS14500 (3049445) | 3049445..3050548 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| K3831_RS14505 (3050836) | 3050836..3051891 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| K3831_RS14510 (3051930) | 3051930..3052331 | - | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
| - (3053049) | 3053049..3053129 | - | 81 | NuclAT_13 | - | - |
| - (3053049) | 3053049..3053129 | - | 81 | NuclAT_13 | - | - |
| - (3053049) | 3053049..3053129 | - | 81 | NuclAT_13 | - | - |
| - (3053049) | 3053049..3053129 | - | 81 | NuclAT_13 | - | - |
| K3831_RS14515 (3052389) | 3052389..3053633 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| K3831_RS14520 (3053725) | 3053725..3054183 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| K3831_RS14525 (3054444) | 3054444..3055901 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| K3831_RS14530 (3055958) | 3055958..3056479 | - | 522 | Protein_2870 | peptide chain release factor H | - |
| K3831_RS14535 (3056475) | 3056475..3056681 | - | 207 | Protein_2871 | RtcB family protein | - |
| K3831_RS14540 (3056999) | 3056999..3057451 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| K3831_RS14545 (3057461) | 3057461..3057859 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| K3831_RS14550 (3057862) | 3057862..3058155 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| K3831_RS14555 (3058207) | 3058207..3059262 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| K3831_RS14560 (3059333) | 3059333..3060118 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| K3831_RS14565 (3060090) | 3060090..3061802 | + | 1713 | Protein_2877 | Flagellar biosynthesis protein FlhA | VF |
| K3831_RS14570 (3062026) | 3062026..3062523 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| K3831_RS14575 (3062699) | 3062699..3063448 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| K3831_RS14580 (3063658) | 3063658..3063918 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| K3831_RS14585 (3063921) | 3063921..3064199 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| K3831_RS14590 (3064355) | 3064355..3065095 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| K3831_RS14595 (3065066) | 3065066..3065833 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| K3831_RS14600 (3066039) | 3066039..3066617 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| K3831_RS14605 (3066857) | 3066857..3069301 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| K3831_RS14610 (3069344) | 3069344..3069790 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| K3831_RS14615 (3069971) | 3069971..3070741 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| K3831_RS14620 (3070782) | 3070782..3071060 | - | 279 | Protein_2888 | ISAs1 family transposase | - |
| K3831_RS14625 (3071058) | 3071058..3071414 | + | 357 | Protein_2889 | hypothetical protein | - |
| K3831_RS14630 (3071424) | 3071424..3071903 | + | 480 | WP_001236645.1 | protein YkfM | - |
| K3831_RS14635 (3072040) | 3072040..3072825 | - | 786 | WP_001086141.1 | lipoprotein | - |
| K3831_RS14645 (3073362) | 3073362..3074093 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| K3831_RS14650 (3074158) | 3074158..3074625 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| K3831_RS14655 (3074622) | 3074622..3075344 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| K3831_RS14660 (3075378) | 3075378..3076133 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| K3831_RS14665 (3076205) | 3076205..3077563 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| K3831_RS14670 (3077611) | 3077611..3078207 | - | 597 | Protein_2897 | methyltransferase domain-containing protein | - |
| K3831_RS14675 (3078238) | 3078238..3079038 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| K3831_RS14680 (3079279) | 3079279..3080193 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| K3831_RS14685 (3080190) | 3080190..3080993 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|