MGE detailed information
MGE type: Prophage MGE length: 57500 bp
Accession: NZ_CP080564 Location: 1977401..2034900 Organism: Staphylococcus aureus strain HL16278 Replicon: chromosome
Accession: NZ_CP080564 Location: 1977401..2034900 Organism: Staphylococcus aureus strain HL16278 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMO07_RS09540 () | 1972861..1973541 | - | 681 | WP_000645733.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| JMO07_RS09545 () | 1973542..1974438 | - | 897 | WP_000991301.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| JMO07_RS09550 () | 1974435..1974815 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| JMO07_RS09555 () | 1975074..1975250 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| JMO07_RS09560 () | 1975493..1975591 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| JMO07_RS09565 () | 1975791..1977077 | + | 1287 | WP_001068523.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| JMO07_RS09570 () | 1977401..1977691 | - | 291 | WP_001792929.1 | hypothetical protein | VF |
| JMO07_RS13615 () | 1977702..1978073 | - | 372 | WP_223200578.1 | hypothetical protein | VF |
| JMO07_RS09575 () | 1978047..1979450 | - | 1404 | Protein_1860 | hypothetical protein | VF |
| JMO07_RS09580 () | 1979839..1980036 | + | 198 | WP_000239610.1 | hypothetical protein | VF |
| JMO07_RS09585 () | 1980408..1980587 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| JMO07_RS09590 () | 1980898..1981158 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| JMO07_RS09595 () | 1981305..1982624 | + | 1320 | WP_025173837.1 | ISL3 family transposase IS1181 | Transposase |
| JMO07_RS13620 () | 1982643..1982708 | + | 66 | Protein_1865 | hypothetical protein | - |
| JMO07_RS09600 () | 1982732..1983072 | - | 341 | Protein_1866 | hypothetical protein | VF |
| JMO07_RS09605 () | 1983756..1984205 | + | 450 | WP_000727649.1 | hypothetical protein | VF |
| JMO07_RS09610 () | 1984300..1984635 | - | 336 | Protein_1868 | SH3 domain-containing protein | - |
| JMO07_RS09615 () | 1985285..1985776 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| JMO07_RS09620 () | 1985967..1986722 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| JMO07_RS09625 () | 1986734..1986988 | - | 255 | WP_000611512.1 | phage holin | - |
| JMO07_RS09630 () | 1987040..1987147 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1987069..1987208 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1987069..1987208 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1987069..1987208 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1987069..1987208 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - | 1987077..1987132 | + | 56 | - | - | Antitoxin Detail |
| JMO07_RS09635 () | 1987200..1987376 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| JMO07_RS09640 () | 1987526..1987822 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| JMO07_RS09645 () | 1987880..1988167 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| JMO07_RS09650 () | 1988214..1988366 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| JMO07_RS09655 () | 1988356..1992141 | - | 3786 | WP_000582165.1 | phage tail spike protein | - |
| JMO07_RS09660 () | 1992157..1993641 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| JMO07_RS09665 () | 1993638..1998167 | - | 4530 | WP_001796452.1 | phage tail tape measure protein | - |
| JMO07_RS13625 () | 1998224..1998358 | - | 135 | WP_000364140.1 | hypothetical protein | - |
| JMO07_RS09670 () | 1998412..1998762 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| JMO07_RS09675 () | 1998812..1999042 | - | 231 | Protein_1882 | Ig-like domain-containing protein | - |
| JMO07_RS09680 () | 1999078..1999722 | - | 645 | WP_000268733.1 | phage tail protein | - |
| JMO07_RS09685 () | 1999723..2000130 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| JMO07_RS09690 () | 2000127..2000531 | - | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| JMO07_RS09695 () | 2000528..2000890 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| JMO07_RS09700 () | 2000874..2001158 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| JMO07_RS09705 () | 2001148..2001432 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| JMO07_RS09710 () | 2001452..2002597 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| JMO07_RS09715 () | 2002621..2003358 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| JMO07_RS09720 () | 2003342..2004487 | - | 1146 | WP_220332254.1 | phage portal protein | - |
| JMO07_RS09725 () | 2004503..2006164 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| JMO07_RS09730 () | 2006161..2006505 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| JMO07_RS09735 () | 2006636..2006935 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| JMO07_RS09740 () | 2007167..2007583 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| JMO07_RS09745 () | 2007611..2007811 | - | 201 | WP_001622114.1 | DUF1514 family protein | - |
| JMO07_RS09750 () | 2007811..2007960 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| JMO07_RS09755 () | 2007957..2008343 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| JMO07_RS09760 () | 2008340..2008546 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| JMO07_RS09765 () | 2008543..2008788 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| JMO07_RS09770 () | 2008825..2009361 | - | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| JMO07_RS09775 () | 2009354..2009524 | - | 171 | WP_000714403.1 | hypothetical protein | - |
| JMO07_RS09780 () | 2009511..2009765 | - | 255 | WP_001065097.1 | DUF1024 family protein | - |
| JMO07_RS09785 () | 2009780..2010022 | - | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| JMO07_RS09790 () | 2010026..2010394 | - | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| JMO07_RS09795 () | 2010407..2010811 | - | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JMO07_RS09800 () | 2010820..2011038 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| JMO07_RS09805 () | 2011045..2011938 | - | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| JMO07_RS09810 () | 2011968..2012438 | - | 471 | WP_000610648.1 | single-stranded DNA-binding protein | - |
| JMO07_RS09815 () | 2012439..2013056 | - | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| JMO07_RS09820 () | 2013137..2014057 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| JMO07_RS09825 () | 2014059..2016002 | - | 1944 | WP_000700555.1 | AAA family ATPase | - |
| JMO07_RS09830 () | 2016011..2016274 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| JMO07_RS09835 () | 2016283..2016543 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| JMO07_RS09840 () | 2016548..2016850 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| JMO07_RS09845 () | 2016945..2017106 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| JMO07_RS09850 () | 2017103..2017426 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| JMO07_RS09855 () | 2017481..2017861 | + | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| JMO07_RS09860 () | 2017848..2018045 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| JMO07_RS09865 () | 2018061..2018813 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| JMO07_RS09870 () | 2018864..2019193 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| JMO07_RS09875 () | 2019182..2019397 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| JMO07_RS09880 () | 2019413..2019676 | - | 264 | WP_000854073.1 | helix-turn-helix transcriptional regulator | - |
| JMO07_RS09885 () | 2019673..2019846 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| JMO07_RS09890 () | 2019809..2020522 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| JMO07_RS09895 () | 2020538..2021470 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| JMO07_RS09900 () | 2021476..2021817 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| JMO07_RS09905 () | 2022021..2022203 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| JMO07_RS09910 () | 2022303..2022767 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| JMO07_RS09915 () | 2022826..2023863 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JMO07_RS09920 () | 2023917..2024744 | + | 828 | Protein_1931 | hypothetical protein | VF |
| JMO07_RS09925 () | 2024982..2025998 | - | 1017 | WP_000595326.1 | hypothetical protein | VF |
| JMO07_RS09930 () | 2026020..2027072 | - | 1053 | WP_000791419.1 | hypothetical protein | VF |
| JMO07_RS09935 () | 2027508..2028731 | + | 1224 | WP_000206621.1 | ArgE/DapE family deacylase | - |
| JMO07_RS09940 () | 2029103..2029949 | - | 847 | Protein_1935 | class I SAM-dependent methyltransferase | - |
| JMO07_RS09945 () | 2030011..2030922 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| JMO07_RS09950 () | 2031062..2032390 | + | 1329 | WP_223200725.1 | TrkH family potassium uptake protein | - |
| JMO07_RS09955 () | 2032924..2034540 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| JMO07_RS09960 () | 2034616..2034900 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| JMO07_RS09965 () | 2035077..2035820 | + | 744 | WP_000197643.1 | CPBP family intramembrane metalloprotease MroQ | - |
| JMO07_RS09970 () | 2035845..2037110 | - | 1266 | WP_029163296.1 | SdrH family protein | - |
| JMO07_RS09975 () | 2037307..2037933 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| JMO07_RS09980 () | 2038294..2039079 | + | 786 | WP_000867942.1 | carbon-nitrogen family hydrolase | - |
| JMO07_RS09985 () | 2039679..2039813 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|