MGE detailed information
MGE type: IScluster/Tn MGE length: 27541 bp
Accession: NZ_CP080236 Location: 2395..29935 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: plasmid pW1316-1
Accession: NZ_CP080236 Location: 2395..29935 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: plasmid pW1316-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW92_RS24835 (1) | 1..858 | + | 858 | WP_219789730.1 | incFII family plasmid replication initiator RepA | - |
| KZW92_RS24840 (1773) | 1773..2042 | + | 270 | WP_015056448.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW92_RS24845 (2042) | 2042..2308 | + | 267 | WP_258055396.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW92_RS24850 (2395) | 2395..3567 | + | 1173 | Protein_3 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24855 (3567) | 3567..4364 | + | 798 | WP_042634526.1 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24860 (4427) | 4427..4708 | + | 282 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| KZW92_RS24865 (4728) | 4728..6299 | + | 1572 | WP_062873784.1 | IS66 family transposase ISCro1 | Transposase |
| KZW92_RS24870 (6334) | 6334..6663 | - | 330 | Protein_7 | oxidoreductase | - |
| KZW92_RS24875 (6755) | 6755..7777 | + | 1023 | WP_001297099.1 | IS21 family transposase IS100kyp | Transposase |
| KZW92_RS24880 (7774) | 7774..8556 | + | 783 | WP_096911776.1 | IS21 family transposase IS100kyp | Transposase |
| KZW92_RS24885 (8624) | 8624..9584 | - | 961 | Protein_10 | IS3 family transposase | - |
| KZW92_RS24890 (9972) | 9972..10187 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| KZW92_RS24895 (10393) | 10393..11090 | + | 698 | WP_225870291.1 | IS1 family transposase IS1R | Transposase |
| KZW92_RS25905 (11227) | 11227..11385 | + | 159 | Protein_13 | AAA family ATPase | - |
| KZW92_RS24910 (13076) | 13076..13328 | - | 253 | Protein_15 | hypothetical protein | - |
| KZW92_RS24915 (13516) | 13516..14703 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| KZW92_RS24920 (14703) | 14703..15068 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| KZW92_RS24925 (15103) | 15103..15561 | - | 459 | Protein_18 | transposase | - |
| KZW92_RS24930 (15639) | 15639..15788 | - | 150 | Protein_19 | IS3 family transposase ISKpn37 | Transposase |
| KZW92_RS24935 (16021) | 16021..17249 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| KZW92_RS24940 (17632) | 17632..17850 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| KZW92_RS24950 (19434) | 19434..19826 | - | 393 | Protein_23 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24955 (19826) | 19826..20998 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24960 (21265) | 21265..21534 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW92_RS24965 (21534) | 21534..21812 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW92_RS24970 (22121) | 22121..23263 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| KZW92_RS25910 (23236) | 23236..23340 | + | 105 | Protein_28 | hypothetical protein | - |
| KZW92_RS24975 (23352) | 23352..23657 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| KZW92_RS24985 (24947) | 24947..29038 | + | 4092 | WP_032491197.1 | Serine protease SepA autotransporter | VF |
| KZW92_RS24990 (29241) | 29241..29935 | + | 695 | WP_085949012.1 | IS1 family transposase IS1N | Transposase |
| KZW92_RS24995 (29940) | 29940..30581 | + | 642 | WP_062873858.1 | toll/interleukin-1 receptor domain-containing protein | - |
| KZW92_RS25000 (30723) | 30723..31118 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| KZW92_RS25005 (31118) | 31118..32077 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| KZW92_RS25010 (32516) | 32516..33418 | + | 903 | WP_077628577.1 | DUF1281 domain-containing protein | - |
| KZW92_RS25015 (33422) | 33422..33727 | + | 306 | WP_063085138.1 | hypothetical protein | - |
| KZW92_RS25020 (33804) | 33804..34487 | + | 684 | WP_000085944.1 | DNA methylase | - |
| KZW92_RS25025 (34488) | 34488..34709 | + | 222 | WP_001104879.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|