MGE detailed information
MGE type: Conjugative plasmid MGE length: 83443 bp
Accession: NZ_CP080236 Location: 1..83443 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: plasmid pW1316-1
Accession: NZ_CP080236 Location: 1..83443 Organism: Escherichia coli O139:H1 strain W13-16 Replicon: plasmid pW1316-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW92_RS24835 (1) | 1..858 | + | 858 | WP_219789730.1 | incFII family plasmid replication initiator RepA | - |
| KZW92_RS24840 (1773) | 1773..2042 | + | 270 | WP_015056448.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW92_RS24845 (2042) | 2042..2308 | + | 267 | WP_258055396.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW92_RS24850 (2395) | 2395..3567 | + | 1173 | Protein_3 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24855 (3567) | 3567..4364 | + | 798 | WP_042634526.1 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24860 (4427) | 4427..4708 | + | 282 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| KZW92_RS24865 (4728) | 4728..6299 | + | 1572 | WP_062873784.1 | IS66 family transposase ISCro1 | Transposase |
| KZW92_RS24870 (6334) | 6334..6663 | - | 330 | Protein_7 | oxidoreductase | - |
| KZW92_RS24875 (6755) | 6755..7777 | + | 1023 | WP_001297099.1 | IS21 family transposase IS100kyp | Transposase |
| KZW92_RS24880 (7774) | 7774..8556 | + | 783 | WP_096911776.1 | IS21 family transposase IS100kyp | Transposase |
| KZW92_RS24885 (8624) | 8624..9584 | - | 961 | Protein_10 | IS3 family transposase | - |
| KZW92_RS24890 (9972) | 9972..10187 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| KZW92_RS24895 (10393) | 10393..11090 | + | 698 | WP_225870291.1 | IS1 family transposase IS1R | Transposase |
| KZW92_RS25905 (11227) | 11227..11385 | + | 159 | Protein_13 | AAA family ATPase | - |
| KZW92_RS24910 (13076) | 13076..13328 | - | 253 | Protein_15 | hypothetical protein | - |
| KZW92_RS24915 (13516) | 13516..14703 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| KZW92_RS24920 (14703) | 14703..15068 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| KZW92_RS24925 (15103) | 15103..15561 | - | 459 | Protein_18 | transposase | - |
| KZW92_RS24930 (15639) | 15639..15788 | - | 150 | Protein_19 | IS3 family transposase ISKpn37 | Transposase |
| KZW92_RS24935 (16021) | 16021..17249 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| KZW92_RS24940 (17632) | 17632..17850 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| KZW92_RS24950 (19434) | 19434..19826 | - | 393 | Protein_23 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24955 (19826) | 19826..20998 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| KZW92_RS24960 (21265) | 21265..21534 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW92_RS24965 (21534) | 21534..21812 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW92_RS24970 (22121) | 22121..23263 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| KZW92_RS25910 (23236) | 23236..23340 | + | 105 | Protein_28 | hypothetical protein | - |
| KZW92_RS24975 (23352) | 23352..23657 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| KZW92_RS24985 (24947) | 24947..29038 | + | 4092 | WP_032491197.1 | Serine protease SepA autotransporter | VF |
| KZW92_RS24990 (29241) | 29241..29935 | + | 695 | WP_085949012.1 | IS1 family transposase IS1N | Transposase |
| KZW92_RS24995 (29940) | 29940..30581 | + | 642 | WP_062873858.1 | toll/interleukin-1 receptor domain-containing protein | - |
| KZW92_RS25000 (30723) | 30723..31118 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| KZW92_RS25005 (31118) | 31118..32077 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| KZW92_RS25010 (32516) | 32516..33418 | + | 903 | WP_077628577.1 | DUF1281 domain-containing protein | - |
| KZW92_RS25015 (33422) | 33422..33727 | + | 306 | WP_063085138.1 | hypothetical protein | - |
| KZW92_RS25020 (33804) | 33804..34487 | + | 684 | WP_000085944.1 | DNA methylase | - |
| KZW92_RS25025 (34488) | 34488..34709 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| KZW92_RS25030 (34690) | 34690..35157 | + | 468 | WP_236323724.1 | DUF1380 family protein | - |
| KZW92_RS25035 (35208) | 35208..35984 | + | 777 | WP_219789733.1 | hypothetical protein | - |
| KZW92_RS25915 (36399) | 36399..36746 | + | 348 | Protein_42 | antirestriction protein | - |
| KZW92_RS25045 (36744) | 36744..37049 | + | 306 | Protein_43 | hydrolase | - |
| KZW92_RS25050 (37096) | 37096..37659 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| KZW92_RS25920 (38259) | 38259..38465 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| KZW92_RS25060 (38491) | 38491..39021 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| KZW92_RS25065 (39077) | 39077..39310 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| KZW92_RS25070 (39374) | 39374..41332 | + | 1959 | WP_063078168.1 | ParB/RepB/Spo0J family partition protein | - |
| KZW92_RS25075 (41387) | 41387..41821 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| KZW92_RS25080 (41818) | 41818..42604 | + | 787 | Protein_50 | plasmid SOS inhibition protein A | - |
| - (42549) | 42549..42766 | + | 218 | NuclAT_0 | - | - |
| - (42549) | 42549..42766 | + | 218 | NuclAT_0 | - | - |
| - (42549) | 42549..42766 | + | 218 | NuclAT_0 | - | - |
| - (42549) | 42549..42766 | + | 218 | NuclAT_0 | - | - |
| - (42549) | 42549..42766 | - | 218 | NuclAT_0 | - | - |
| KZW92_RS25925 (42754) | 42754..42906 | + | 153 | Protein_51 | FlmC family protein | - |
| KZW92_RS25085 (42851) | 42851..42973 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| KZW92_RS25090 (43300) | 43300..44871 | - | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| KZW92_RS25095 (44891) | 44891..45238 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| KZW92_RS25100 (45238) | 45238..45888 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| KZW92_RS25930 (45986) | 45986..46282 | - | 297 | Protein_56 | hypothetical protein | - |
| KZW92_RS25105 (46506) | 46506..46802 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| KZW92_RS25110 (46908) | 46908..47729 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| KZW92_RS25115 (48026) | 48026..48673 | - | 648 | WP_000601040.1 | hypothetical protein | VF |
| KZW92_RS25120 (48949) | 48949..49332 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KZW92_RS25125 (49533) | 49533..50171 | + | 639 | WP_236262580.1 | transcriptional regulator TraJ family protein | - |
| KZW92_RS25130 (50291) | 50291..50518 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| KZW92_RS25135 (50552) | 50552..50914 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| KZW92_RS25140 (50919) | 50919..51230 | + | 312 | WP_000012101.1 | type IV conjugative transfer system protein TraL | - |
| KZW92_RS25145 (51252) | 51252..51818 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| KZW92_RS25150 (51805) | 51805..52533 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KZW92_RS25155 (52533) | 52533..53960 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KZW92_RS25160 (53950) | 53950..54522 | + | 573 | WP_024179131.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KZW92_RS25165 (54519) | 54519..54836 | + | 318 | WP_063079180.1 | conjugal transfer protein TrbD | - |
| KZW92_RS25170 (54833) | 54833..55084 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| KZW92_RS25175 (55081) | 55081..55596 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KZW92_RS25180 (55731) | 55731..55952 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| KZW92_RS25185 (56112) | 56112..58739 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| KZW92_RS25190 (58736) | 58736..59122 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| KZW92_RS25195 (59119) | 59119..59751 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| KZW92_RS25200 (59748) | 59748..60740 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| KZW92_RS25205 (60766) | 60766..61227 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| KZW92_RS25210 (61257) | 61257..61709 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| KZW92_RS25215 (61737) | 61737..62375 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KZW92_RS25220 (62372) | 62372..63763 | + | 1392 | WP_219789726.1 | conjugal transfer protein TraN | - |
| KZW92_RS25225 (63790) | 63790..64047 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| KZW92_RS25230 (64040) | 64040..64783 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KZW92_RS25235 (64799) | 64799..65146 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| KZW92_RS25240 (65265) | 65265..65549 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KZW92_RS25245 (65536) | 65536..66081 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KZW92_RS25250 (66071) | 66071..66385 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| KZW92_RS25255 (66339) | 66339..66731 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| KZW92_RS25260 (66718) | 66718..68091 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| KZW92_RS25265 (68088) | 68088..70910 | + | 2823 | WP_062873754.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KZW92_RS25270 (70925) | 70925..71428 | + | 504 | WP_219789728.1 | surface exclusion protein | - |
| KZW92_RS25275 (71460) | 71460..72191 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| KZW92_RS25280 (72394) | 72394..73131 | + | 738 | WP_000199900.1 | hypothetical protein | - |
| KZW92_RS25285 (73182) | 73182..74411 | + | 1230 | Protein_93 | type IV conjugative transfer system coupling protein TraD | - |
| KZW92_RS25290 (74329) | 74329..74982 | - | 654 | WP_258055395.1 | DUF2726 domain-containing protein | - |
| KZW92_RS25295 (75134) | 75134..75760 | - | 627 | WP_000794191.1 | NYN domain-containing protein | - |
| KZW92_RS25300 (76172) | 76172..76381 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| KZW92_RS25305 (76512) | 76512..77072 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| KZW92_RS25310 (77175) | 77175..78035 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| KZW92_RS25315 (78094) | 78094..78840 | - | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| KZW92_RS25320 (78860) | 78860..82576 | - | 3717 | Protein_100 | Multifunctional conjugation protein TraI | Relaxase |
| KZW92_RS25325 (82884) | 82884..83132 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| KZW92_RS25935 (83247) | 83247..83431 | + | 185 | Protein_102 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|