MGE detailed information
MGE type: Conjugative plasmid MGE length: 82610 bp
Accession: NZ_CP080226 Location: 1..82610 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: plasmid pP136-3
Accession: NZ_CP080226 Location: 1..82610 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: plasmid pP136-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW89_RS26335 (1) | 1..858 | + | 858 | WP_042634321.1 | incFII family plasmid replication initiator RepA | - |
| KZW89_RS26340 (1775) | 1775..2044 | + | 270 | WP_069192543.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW89_RS26345 (2044) | 2044..2328 | + | 285 | WP_096217460.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW89_RS26350 (2295) | 2295..2573 | + | 279 | Protein_3 | IS66 family transposase ISCro1 | Transposase |
| KZW89_RS26355 (2593) | 2593..4164 | + | 1572 | WP_062873784.1 | IS66 family transposase ISCro1 | Transposase |
| KZW89_RS28985 (4199) | 4199..4528 | - | 330 | Protein_5 | oxidoreductase | - |
| KZW89_RS26360 (4528) | 4528..4887 | - | 360 | Protein_6 | IS3 family transposase IS1351 | Transposase |
| KZW89_RS26365 (5070) | 5070..6264 | - | 1195 | Protein_7 | IS91 family transposase | - |
| KZW89_RS26370 (6264) | 6264..6629 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| KZW89_RS26375 (6717) | 6717..7323 | - | 607 | Protein_9 | transposase | - |
| KZW89_RS26380 (7711) | 7711..7926 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| KZW89_RS26385 (8354) | 8354..9541 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| KZW89_RS26390 (9541) | 9541..9906 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| KZW89_RS26395 (9941) | 9941..10399 | - | 459 | Protein_13 | transposase | - |
| KZW89_RS26400 (10477) | 10477..10626 | - | 150 | Protein_14 | IS3 family transposase ISKpn37 | Transposase |
| KZW89_RS26405 (11134) | 11134..11352 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| KZW89_RS26415 (12936) | 12936..13328 | - | 393 | Protein_17 | IS21 family transposase IS21 | Transposase |
| KZW89_RS26420 (13328) | 13328..14500 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| KZW89_RS26425 (14767) | 14767..15036 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZW89_RS26430 (15036) | 15036..15314 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZW89_RS26435 (15623) | 15623..16765 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| KZW89_RS28990 (16738) | 16738..16842 | + | 105 | Protein_22 | hypothetical protein | - |
| KZW89_RS26440 (16854) | 16854..17159 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| KZW89_RS26450 (18449) | 18449..22540 | + | 4092 | WP_032491197.1 | Serine protease SepA autotransporter | VF |
| KZW89_RS26455 (22743) | 22743..23275 | + | 533 | Protein_26 | IS1 family transposase IS1N | Transposase |
| KZW89_RS26460 (23306) | 23306..24919 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| KZW89_RS26465 (24950) | 24950..25300 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| KZW89_RS26470 (25297) | 25297..25722 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| KZW89_RS26475 (25869) | 25869..26510 | + | 642 | WP_062873858.1 | toll/interleukin-1 receptor domain-containing protein | - |
| KZW89_RS26480 (26652) | 26652..27047 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| KZW89_RS26485 (27047) | 27047..28006 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| KZW89_RS26490 (28445) | 28445..29347 | + | 903 | WP_077628577.1 | DUF1281 domain-containing protein | - |
| KZW89_RS26495 (29351) | 29351..29656 | + | 306 | WP_063085138.1 | hypothetical protein | - |
| KZW89_RS26500 (29733) | 29733..30416 | + | 684 | WP_000085944.1 | DNA methylase | - |
| KZW89_RS26505 (30417) | 30417..30638 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| KZW89_RS26510 (30619) | 30619..31086 | + | 468 | WP_236323724.1 | DUF1380 family protein | - |
| KZW89_RS26515 (31137) | 31137..31913 | + | 777 | WP_053528591.1 | hypothetical protein | - |
| KZW89_RS26520 (32328) | 32328..32753 | + | 426 | WP_052898751.1 | antirestriction protein | - |
| KZW89_RS26525 (32800) | 32800..33222 | + | 423 | WP_001613000.1 | DUF1380 family protein | - |
| KZW89_RS26530 (33219) | 33219..33410 | + | 192 | WP_062873855.1 | hypothetical protein | - |
| KZW89_RS28995 (33606) | 33606..33833 | + | 228 | WP_071776744.1 | hypothetical protein | - |
| KZW89_RS26540 (34448) | 34448..34678 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| KZW89_RS26545 (34730) | 34730..36091 | + | 1362 | WP_063078170.1 | DUF3560 domain-containing protein | - |
| KZW89_RS26550 (36138) | 36138..36701 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| KZW89_RS29000 (37295) | 37295..37501 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| KZW89_RS26560 (37527) | 37527..38057 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| KZW89_RS26565 (38113) | 38113..38346 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| KZW89_RS26570 (38410) | 38410..40368 | + | 1959 | WP_063078168.1 | ParB/RepB/Spo0J family partition protein | - |
| KZW89_RS26575 (40423) | 40423..40857 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| KZW89_RS26580 (40854) | 40854..41640 | + | 787 | Protein_51 | plasmid SOS inhibition protein A | - |
| - (41585) | 41585..41802 | + | 218 | NuclAT_0 | - | - |
| - (41585) | 41585..41802 | + | 218 | NuclAT_0 | - | - |
| - (41585) | 41585..41802 | + | 218 | NuclAT_0 | - | - |
| - (41585) | 41585..41802 | + | 218 | NuclAT_0 | - | - |
| - (41585) | 41585..41802 | - | 218 | NuclAT_0 | - | - |
| KZW89_RS29005 (41790) | 41790..41942 | + | 153 | Protein_52 | FlmC family protein | - |
| KZW89_RS26585 (41887) | 41887..42009 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| KZW89_RS26590 (42310) | 42310..42606 | - | 297 | Protein_54 | hypothetical protein | - |
| KZW89_RS26595 (42830) | 42830..43126 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| KZW89_RS26600 (43232) | 43232..44053 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| KZW89_RS26605 (44350) | 44350..44997 | - | 648 | WP_000601040.1 | hypothetical protein | VF |
| KZW89_RS26610 (45273) | 45273..45656 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KZW89_RS26615 (45848) | 45848..46495 | + | 648 | WP_000338012.1 | transcriptional regulator TraJ family protein | - |
| KZW89_RS26620 (46615) | 46615..46842 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| KZW89_RS26625 (46876) | 46876..47238 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| KZW89_RS26630 (47243) | 47243..47554 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| KZW89_RS26635 (47576) | 47576..48142 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| KZW89_RS26640 (48129) | 48129..48857 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KZW89_RS26645 (48857) | 48857..50284 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KZW89_RS26650 (50274) | 50274..50846 | + | 573 | WP_063078161.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KZW89_RS26655 (50843) | 50843..51040 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| KZW89_RS26660 (51052) | 51052..51303 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| KZW89_RS26665 (51300) | 51300..51815 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KZW89_RS26670 (51950) | 51950..52171 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| KZW89_RS26675 (52331) | 52331..54958 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| KZW89_RS26680 (54955) | 54955..55341 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| KZW89_RS26685 (55338) | 55338..55970 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| KZW89_RS26690 (55967) | 55967..56959 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| KZW89_RS26695 (56985) | 56985..57446 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| KZW89_RS26700 (57476) | 57476..57928 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| KZW89_RS26705 (57956) | 57956..58594 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KZW89_RS26710 (58591) | 58591..60399 | + | 1809 | WP_112030684.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KZW89_RS26715 (60426) | 60426..60686 | + | 261 | WP_000864323.1 | conjugal transfer protein TrbE | - |
| KZW89_RS26720 (60679) | 60679..61422 | + | 744 | WP_219789424.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KZW89_RS26725 (61438) | 61438..61785 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| KZW89_RS26730 (61904) | 61904..62188 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KZW89_RS26735 (62175) | 62175..62720 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KZW89_RS26740 (62710) | 62710..63024 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| KZW89_RS26745 (62978) | 62978..63370 | + | 393 | WP_062873756.1 | F-type conjugal transfer protein TrbF | - |
| KZW89_RS26750 (63357) | 63357..64730 | + | 1374 | WP_156841533.1 | conjugal transfer pilus assembly protein TraH | - |
| KZW89_RS26755 (64727) | 64727..67549 | + | 2823 | WP_062873754.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KZW89_RS26760 (67564) | 67564..68067 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| KZW89_RS26765 (68099) | 68099..68830 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| KZW89_RS26770 (69033) | 69033..69770 | + | 738 | WP_000199900.1 | hypothetical protein | - |
| KZW89_RS26775 (69821) | 69821..72073 | + | 2253 | WP_199266148.1 | type IV conjugative transfer system coupling protein TraD | - |
| KZW89_RS26780 (72073) | 72073..77343 | + | 5271 | WP_000986938.1 | Multifunctional conjugation protein TraI | Relaxase |
| KZW89_RS26785 (77363) | 77363..78109 | + | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| KZW89_RS26790 (78168) | 78168..79028 | + | 861 | WP_042634322.1 | putative protein YcjY | VF |
| KZW89_RS26795 (79131) | 79131..79691 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| KZW89_RS26800 (79822) | 79822..80031 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| KZW89_RS26805 (80443) | 80443..81069 | + | 627 | WP_000794191.1 | NYN domain-containing protein | - |
| KZW89_RS26810 (81221) | 81221..81811 | + | 591 | WP_001375082.1 | DUF2726 domain-containing protein | - |
| KZW89_RS26815 (82051) | 82051..82299 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| KZW89_RS29010 (82414) | 82414..82598 | + | 185 | Protein_100 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|