MGE detailed information
MGE type: Prophage MGE length: 57236 bp
Accession: NZ_CP080223 Location: 2354039..2411274 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Accession: NZ_CP080223 Location: 2354039..2411274 Organism: Escherichia coli O141:H4 strain P13-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZW89_RS11625 (2350130) | 2350130..2350495 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| KZW89_RS11630 (2350482) | 2350482..2350811 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| KZW89_RS11635 (2350850) | 2350850..2351671 | - | 822 | WP_001260865.1 | serine protease | - |
| KZW89_RS11640 (2351771) | 2351771..2351854 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| KZW89_RS11645 (2351947) | 2351947..2352255 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| KZW89_RS11655 (2352679) | 2352679..2353932 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| KZW89_RS11660 (2354039) | 2354039..2354932 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| KZW89_RS11665 (2355067) | 2355067..2356287 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| KZW89_RS11670 (2356412) | 2356412..2357107 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| KZW89_RS11675 (2357060) | 2357060..2358352 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KZW89_RS11680 (2358511) | 2358511..2359125 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KZW89_RS11685 (2359168) | 2359168..2360022 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KZW89_RS11690 (2360024) | 2360024..2360641 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KZW89_RS11695 (2360652) | 2360652..2363075 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KZW89_RS11700 (2363136) | 2363136..2365562 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KZW89_RS11705 (2365761) | 2365761..2366066 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| KZW89_RS11710 (2366174) | 2366174..2366884 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KZW89_RS11715 (2366887) | 2366887..2367447 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KZW89_RS11720 (2367482) | 2367482..2367823 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KZW89_RS11725 (2367958) | 2367958..2368284 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KZW89_RS11730 (2368490) | 2368490..2369704 | + | 1215 | WP_001372512.1 | starvation-sensing protein RspA | - |
| KZW89_RS11735 (2369716) | 2369716..2370735 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KZW89_RS11740 (2370923) | 2370923..2372203 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| KZW89_RS11745 (2372238) | 2372238..2372489 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KZW89_RS11750 (2372562) | 2372562..2374544 | - | 1983 | Protein_2306 | 3'-5' exoribonuclease | - |
| KZW89_RS11755 (2374534) | 2374534..2374785 | + | 252 | Protein_2307 | DUF977 family protein | - |
| KZW89_RS11760 (2374782) | 2374782..2375271 | + | 490 | Protein_2308 | SAM-dependent methyltransferase | - |
| KZW89_RS11765 (2375749) | 2375749..2376170 | + | 422 | Protein_2309 | hypothetical protein | - |
| KZW89_RS11770 (2376826) | 2376826..2377848 | + | 1023 | Protein_2310 | ISNCY family transposase ISCARN112 | Transposase |
| KZW89_RS28815 (2377969) | 2377969..2378118 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KZW89_RS11775 (2378555) | 2378555..2378887 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KZW89_RS11780 (2379090) | 2379090..2379395 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KZW89_RS11785 (2379420) | 2379420..2379659 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KZW89_RS11790 (2379659) | 2379659..2379946 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KZW89_RS11795 (2380018) | 2380018..2380173 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KZW89_RS11800 (2380390) | 2380390..2380641 | + | 252 | WP_000980994.1 | protein Rem | - |
| KZW89_RS11805 (2380708) | 2380708..2380986 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KZW89_RS11810 (2380988) | 2380988..2382037 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KZW89_RS11815 (2382051) | 2382051..2382803 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KZW89_RS11820 (2383081) | 2383081..2383170 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KZW89_RS11825 (2383225) | 2383225..2383437 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KZW89_RS11830 (2383738) | 2383738..2383953 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KZW89_RS11835 (2384317) | 2384317..2384487 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KZW89_RS11840 (2384707) | 2384707..2384922 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KZW89_RS11845 (2384927) | 2384927..2385238 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KZW89_RS11850 (2385235) | 2385235..2385768 | + | 534 | WP_001092971.1 | lysozyme | - |
| KZW89_RS11855 (2385765) | 2385765..2386262 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KZW89_RS11860 (2386625) | 2386625..2386837 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KZW89_RS11865 (2386848) | 2386848..2387036 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KZW89_RS11870 (2387039) | 2387039..2387104 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KZW89_RS11875 (2387184) | 2387184..2387339 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KZW89_RS11880 (2387511) | 2387511..2387684 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KZW89_RS11885 (2387836) | 2387836..2388246 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KZW89_RS11890 (2388304) | 2388304..2388537 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KZW89_RS11895 (2388926) | 2388926..2389471 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| KZW89_RS11900 (2389446) | 2389446..2389691 | + | 246 | Protein_2337 | phage terminase large subunit family protein | - |
| KZW89_RS11905 (2389681) | 2389681..2389827 | + | 147 | Protein_2338 | phage minor tail protein L | - |
| KZW89_RS11910 (2389826) | 2389826..2390896 | + | 1071 | Protein_2339 | phage tail protein | - |
| KZW89_RS11915 (2390983) | 2390983..2391195 | + | 213 | Protein_2340 | hypothetical protein | - |
| KZW89_RS11920 (2391195) | 2391195..2391770 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| KZW89_RS11925 (2391868) | 2391868..2392458 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KZW89_RS11930 (2392775) | 2392775..2393008 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KZW89_RS11935 (2393077) | 2393077..2393190 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KZW89_RS11940 (2393793) | 2393793..2395076 | + | 1284 | Protein_2345 | MHS family MFS transporter YdfJ | - |
| KZW89_RS11945 (2395165) | 2395165..2396625 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| KZW89_RS11950 (2396660) | 2396660..2396863 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KZW89_RS11955 (2397040) | 2397040..2397726 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KZW89_RS11960 (2397815) | 2397815..2398561 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| KZW89_RS11965 (2398698) | 2398698..2400743 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| KZW89_RS11970 (2400787) | 2400787..2401305 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| KZW89_RS11975 (2401581) | 2401581..2401973 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| KZW89_RS11980 (2402228) | 2402228..2403118 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| KZW89_RS11985 (2403233) | 2403233..2403337 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KZW89_RS11990 (2403337) | 2403337..2403432 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KZW89_RS11995 (2403559) | 2403559..2404746 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| KZW89_RS12000 (2404941) | 2404941..2405840 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| KZW89_RS12005 (2405871) | 2405871..2406089 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| KZW89_RS12010 (2406121) | 2406121..2406504 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| KZW89_RS12015 (2406524) | 2406524..2406958 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| KZW89_RS12020 (2407170) | 2407170..2407835 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| KZW89_RS12025 (2407860) | 2407860..2409050 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| KZW89_RS12030 (2409200) | 2409200..2410315 | - | 1116 | WP_000258599.1 | putative protein YneK | - |
| KZW89_RS12035 (2410393) | 2410393..2411274 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| KZW89_RS12040 (2411375) | 2411375..2412763 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| KZW89_RS12045 (2412827) | 2412827..2413753 | + | 927 | WP_000257409.1 | glutaminase B | - |
| KZW89_RS12050 (2413753) | 2413753..2414112 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| KZW89_RS12055 (2414185) | 2414185..2415171 | + | 987 | Protein_2368 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.01 |