MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP080172 Location: 290924..300275 Organism: Escherichia coli strain PK8566 Replicon: chromosome
Accession: NZ_CP080172 Location: 290924..300275 Organism: Escherichia coli strain PK8566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY09_RS01345 (287655) | 287655..288374 | - | 720 | WP_064525723.1 | two-component system response regulator DcuR | - |
| KZY09_RS01350 (288371) | 288371..290002 | - | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| KZY09_RS01355 (290183) | 290183..290413 | + | 231 | WP_000371698.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KZY09_RS01360 (290425) | 290425..290697 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KZY09_RS01365 (290924) | 290924..291220 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KZY09_RS01370 (291248) | 291248..291421 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KZY09_RS01375 (291540) | 291540..293057 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KZY09_RS01380 (293294) | 293294..294751 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KZY09_RS01385 (294810) | 294810..296957 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KZY09_RS01390 (297037) | 297037..298371 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KZY09_RS01395 (298737) | 298737..300275 | - | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KZY09_RS01405 (301074) | 301074..301649 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| KZY09_RS01410 (301686) | 301686..303383 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| KZY09_RS01415 (303359) | 303359..303697 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KZY09_RS01420 (303813) | 303813..305114 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |