MGE detailed information
MGE type: Genomic_island MGE length: 9356 bp
Accession: NZ_CP080133 Location: 4126167..4135522 Organism: Escherichia coli strain PK8277 Replicon: chromosome
Accession: NZ_CP080133 Location: 4126167..4135522 Organism: Escherichia coli strain PK8277 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY04_RS20020 (4121968) | 4121968..4122306 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KZY04_RS20025 (4122282) | 4122282..4123979 | + | 1698 | WP_038988893.1 | protein-disulfide reductase DsbD | - |
| KZY04_RS20030 (4124016) | 4124016..4124591 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| KZY04_RS20040 (4125152) | 4125152..4125849 | + | 698 | WP_232379017.1 | IS1 family transposase | - |
| KZY04_RS20045 (4126167) | 4126167..4127705 | + | 1539 | WP_072663459.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KZY04_RS20050 (4128070) | 4128070..4129404 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KZY04_RS20055 (4129484) | 4129484..4131631 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KZY04_RS20060 (4131690) | 4131690..4133147 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KZY04_RS20065 (4133384) | 4133384..4134901 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KZY04_RS20070 (4135025) | 4135025..4135198 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KZY04_RS20075 (4135226) | 4135226..4135522 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KZY04_RS20080 (4135749) | 4135749..4136021 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| KZY04_RS20085 (4136033) | 4136033..4136263 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KZY04_RS20090 (4136444) | 4136444..4138075 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| KZY04_RS20095 (4138072) | 4138072..4138791 | + | 720 | WP_219795029.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.002 |