MGE detailed information
MGE type: Mobilizable plasmid MGE length: 122366 bp
Accession: NZ_CP080128 Location: 1..122366 Organism: Escherichia coli strain PK8568 Replicon: plasmid pPK8568-122kb
Accession: NZ_CP080128 Location: 1..122366 Organism: Escherichia coli strain PK8568 Replicon: plasmid pPK8568-122kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY03_RS23445 (KZY03_23445) | 2523..2524 | - | 2 | WP_219805136.1 | IS3 family transposase IS2 | Transposase |
| KZY03_RS23450 (KZY03_23450) | 3144..4046 | - | 903 | Protein_2 | IS3 family transposase ISSlo2 | Transposase |
| KZY03_RS23455 (KZY03_23455) | 4056..5207 | - | 1152 | WP_097489460.1 | IS30 family transposase IS30D | Transposase |
| KZY03_RS23460 (KZY03_23460) | 5276..5533 | - | 258 | Protein_4 | IS3 family transposase ISEc52 | Transposase |
| KZY03_RS23465 (KZY03_23465) | 5590..6156 | - | 567 | WP_072213861.1 | recombination-associated protein RdgC | - |
| KZY03_RS23470 (KZY03_23470) | 6149..6433 | - | 285 | WP_001567974.1 | hypothetical protein | - |
| KZY03_RS23475 (KZY03_23475) | 6895..7683 | + | 789 | WP_130568718.1 | hypothetical protein | - |
| KZY03_RS23480 (KZY03_23480) | 7723..8145 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| KZY03_RS25370 | 8180..8311 | + | 132 | WP_001113883.1 | hypothetical protein | - |
| KZY03_RS23485 (KZY03_23485) | 8321..8713 | + | 393 | WP_130568719.1 | hypothetical protein | - |
| KZY03_RS23490 (KZY03_23490) | 9049..9933 | + | 885 | WP_072649745.1 | RepB family plasmid replication initiator protein | - |
| KZY03_RS23495 (KZY03_23495) | 10226..11035 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| KZY03_RS23500 (KZY03_23500) | 11204..12400 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| KZY03_RS23505 (KZY03_23505) | 12417..13418 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| KZY03_RS23510 (KZY03_23510) | 13644..15350 | + | 1707 | Protein_15 | hypothetical protein | - |
| KZY03_RS23515 (KZY03_23515) | 15410..16999 | + | 1590 | WP_038997104.1 | hypothetical protein | - |
| KZY03_RS23520 (KZY03_23520) | 17009..17824 | + | 816 | WP_065898570.1 | hypothetical protein | - |
| KZY03_RS23525 (KZY03_23525) | 17977..18441 | + | 465 | WP_224482127.1 | hypothetical protein | - |
| KZY03_RS23530 (KZY03_23530) | 18453..18962 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| KZY03_RS23535 (KZY03_23535) | 19238..20349 | - | 1112 | Protein_20 | IS4 family transposase IS421 | Transposase |
| KZY03_RS23540 (KZY03_23540) | 20427..20582 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| KZY03_RS23550 (KZY03_23550) | 21570..22034 | - | 465 | WP_232379080.1 | hypothetical protein | - |
| KZY03_RS23555 (KZY03_23555) | 22031..22252 | - | 222 | WP_000245709.1 | host cell division inhibitor Icd-like protein | - |
| KZY03_RS23560 (KZY03_23560) | 22872..23384 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| KZY03_RS23565 (KZY03_23565) | 23388..23927 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| KZY03_RS23570 (KZY03_23570) | 24008..24520 | + | 513 | WP_072649761.1 | hypothetical protein | - |
| KZY03_RS23575 (KZY03_23575) | 24495..24984 | - | 490 | Protein_28 | IS3 family transposase ISEc52 | Transposase |
| KZY03_RS23580 (KZY03_23580) | 25065..26447 | - | 1383 | Protein_29 | group II intron reverse transcriptase/maturase | - |
| KZY03_RS23585 (KZY03_23585) | 26504..27616 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| KZY03_RS23595 (KZY03_23595) | 28596..29018 | - | 423 | Protein_31 | IS3 family transposase ISEc52 | Transposase |
| KZY03_RS23600 (KZY03_23600) | 29022..29915 | + | 894 | Protein_32 | IS3 family transposase ISEhe3 | Transposase |
| KZY03_RS23605 (KZY03_23605) | 31928..32563 | - | 636 | WP_269754611.1 | helix-turn-helix transcriptional regulator | - |
| KZY03_RS23610 (KZY03_23610) | 32963..33660 | + | 698 | WP_223545352.1 | IS1 family transposase IS1X2 | Transposase |
| KZY03_RS23615 (KZY03_23615) | 33595..35235 | - | 1641 | WP_232379091.1 | hypothetical protein | Relaxase |
| KZY03_RS23620 (KZY03_23620) | 35246..35968 | - | 723 | WP_072649697.1 | hypothetical protein | - |
| KZY03_RS23625 (KZY03_23625) | 36202..37206 | + | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| KZY03_RS23630 (KZY03_23630) | 37388..37777 | - | 390 | WP_232379269.1 | plasmid transfer protein | - |
| KZY03_RS25150 | 38803..39084 | + | 282 | WP_226192168.1 | hypothetical protein | - |
| KZY03_RS23640 (KZY03_23640) | 39336..39848 | + | 513 | WP_072643675.1 | hypothetical protein | - |
| KZY03_RS23645 (KZY03_23645) | 40410..41110 | + | 701 | WP_232379092.1 | IS1-like element IS1A family transposase | - |
| KZY03_RS25155 | 41246..41389 | + | 144 | Protein_42 | HNH endonuclease | - |
| KZY03_RS23650 (KZY03_23650) | 41488..41673 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| KZY03_RS23660 (KZY03_23660) | 42660..42863 | + | 204 | WP_072796178.1 | tautomerase PptA | - |
| KZY03_RS23665 (KZY03_23665) | 42867..43436 | - | 570 | WP_072796176.1 | flavin reductase family protein | - |
| KZY03_RS23670 (KZY03_23670) | 43611..43703 | + | 93 | Protein_47 | N-hydroxyarylamine O-acetyltransferase | - |
| KZY03_RS23675 (KZY03_23675) | 43895..45451 | - | 1557 | WP_053897648.1 | Chromosome partition protein Smc | VF |
| KZY03_RS23680 (KZY03_23680) | 45476..46180 | + | 705 | WP_001067855.1 | Chromosome partition protein Smc | VF |
| KZY03_RS23685 (KZY03_23685) | 46520..47782 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| KZY03_RS23690 (KZY03_23690) | 48022..48663 | + | 642 | WP_042973484.1 | MBL fold metallo-hydrolase | - |
| KZY03_RS23695 (KZY03_23695) | 48937..49634 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| KZY03_RS23700 (KZY03_23700) | 49855..50715 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| KZY03_RS23705 (KZY03_23705) | 50850..51554 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KZY03_RS23710 (KZY03_23710) | 51705..52520 | + | 816 | WP_000018329.1 | hypothetical protein | ARG |
| KZY03_RS23715 (KZY03_23715) | 52710..53414 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| KZY03_RS23720 (KZY03_23720) | 53491..55389 | + | 1899 | Protein_57 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KZY03_RS23725 (KZY03_23725) | 55423..56139 | + | 717 | Protein_58 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KZY03_RS23730 (KZY03_23730) | 56197..56439 | + | 243 | WP_000844627.1 | transposase | - |
| KZY03_RS23735 (KZY03_23735) | 56471..57121 | - | 651 | Protein_60 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KZY03_RS23740 (KZY03_23740) | 57227..58420 | + | 1194 | Protein_61 | tetracycline efflux MFS transporter Tet(A) | - |
| KZY03_RS23745 (KZY03_23745) | 58452..59336 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KZY03_RS23750 (KZY03_23750) | 59474..59866 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| KZY03_RS23755 (KZY03_23755) | 59870..61621 | + | 1752 | Protein_64 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KZY03_RS23760 (KZY03_23760) | 61655..62410 | + | 756 | Protein_65 | N-hydroxyarylamine O-acetyltransferase | - |
| KZY03_RS23765 (KZY03_23765) | 62506..63399 | - | 894 | WP_072649766.1 | hypothetical protein | VF |
| KZY03_RS23770 (KZY03_23770) | 63479..64159 | - | 681 | WP_219805134.1 | respiratory nitrate reductase subunit gamma | - |
| KZY03_RS23775 (KZY03_23775) | 64156..64851 | - | 696 | WP_072649765.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| KZY03_RS23780 (KZY03_23780) | 64851..66395 | - | 1545 | WP_000702558.1 | nitrate reductase subunit beta | - |
| KZY03_RS23785 (KZY03_23785) | 66392..70132 | - | 3741 | WP_219805135.1 | nitrate reductase Z subunit alpha | - |
| KZY03_RS23790 (KZY03_23790) | 70227..71615 | - | 1389 | WP_001207923.1 | nitrate/nitrite transporter NarU | - |
| KZY03_RS23795 (KZY03_23795) | 71878..72858 | + | 981 | WP_129753561.1 | IS5 family transposase ISKpn26 | Transposase |
| KZY03_RS23800 (KZY03_23800) | 73006..73287 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KZY03_RS23805 (KZY03_23805) | 73277..73528 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KZY03_RS23810 (KZY03_23810) | 74710..75678 | + | 969 | WP_165403134.1 | IS5 family transposase IS903B | Transposase |
| KZY03_RS23815 (KZY03_23815) | 75838..75981 | + | 144 | WP_152930453.1 | hypothetical protein | - |
| KZY03_RS23820 (KZY03_23820) | 76042..76287 | + | 246 | Protein_77 | IS3 family transposase ISEhe3 | Transposase |
| KZY03_RS23825 (KZY03_23825) | 76355..77507 | + | 1153 | Protein_78 | IS30 family transposase IS30D | Transposase |
| KZY03_RS23830 (KZY03_23830) | 77520..77777 | - | 258 | Protein_79 | transposase | - |
| KZY03_RS23835 (KZY03_23835) | 77852..78163 | + | 312 | Protein_80 | VRR-NUC domain-containing protein | - |
| KZY03_RS23840 (KZY03_23840) | 78230..78385 | + | 156 | WP_032236586.1 | hypothetical protein | - |
| KZY03_RS23845 (KZY03_23845) | 78887..79513 | + | 627 | WP_000484112.1 | hypothetical protein | - |
| KZY03_RS23850 (KZY03_23850) | 79510..80187 | + | 678 | Protein_83 | metallophosphoesterase | - |
| KZY03_RS23855 (KZY03_23855) | 80184..80885 | + | 702 | WP_059039678.1 | hypothetical protein | - |
| KZY03_RS23860 (KZY03_23860) | 81187..82449 | + | 1263 | WP_059039676.1 | hypothetical protein | - |
| KZY03_RS23865 (KZY03_23865) | 82522..83028 | + | 507 | WP_025210458.1 | hypothetical protein | - |
| KZY03_RS23870 (KZY03_23870) | 83293..86409 | - | 3117 | WP_072650946.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KZY03_RS23875 (KZY03_23875) | 86531..87787 | - | 1257 | WP_072196859.1 | restriction endonuclease subunit S | - |
| KZY03_RS23880 (KZY03_23880) | 87784..89340 | - | 1557 | WP_060578235.1 | type I restriction-modification system subunit M | - |
| KZY03_RS23885 (KZY03_23885) | 89523..89744 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KZY03_RS23890 (KZY03_23890) | 89744..90124 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KZY03_RS23895 (KZY03_23895) | 90129..90308 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| KZY03_RS23900 (KZY03_23900) | 90336..91379 | + | 1044 | WP_130568730.1 | DUF968 domain-containing protein | - |
| KZY03_RS25160 | 91801..92151 | + | 351 | Protein_94 | ORF6N domain-containing protein | - |
| KZY03_RS25165 | 92272..92604 | + | 333 | WP_224205061.1 | phage antirepressor KilAC domain-containing protein | - |
| KZY03_RS23910 (KZY03_23910) | 92637..93488 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| KZY03_RS23915 (KZY03_23915) | 93599..93808 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| KZY03_RS23920 (KZY03_23920) | 93979..94676 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KZY03_RS23925 (KZY03_23925) | 94974..97400 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| KZY03_RS23930 (KZY03_23930) | 97414..98040 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| KZY03_RS23935 (KZY03_23935) | 98033..98809 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| KZY03_RS23940 (KZY03_23940) | 98864..99460 | + | 597 | WP_032203482.1 | molecular chaperone | - |
| KZY03_RS23945 (KZY03_23945) | 99490..99987 | + | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| KZY03_RS23955 (KZY03_23955) | 101363..101584 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| KZY03_RS23960 (KZY03_23960) | 101592..102623 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| KZY03_RS23965 (KZY03_23965) | 102674..102985 | + | 312 | WP_016246567.1 | hypothetical protein | - |
| KZY03_RS23970 (KZY03_23970) | 103277..106264 | - | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| KZY03_RS23975 (KZY03_23975) | 106432..106836 | + | 405 | Protein_109 | recombinase family protein | - |
| KZY03_RS23980 (KZY03_23980) | 106964..108097 | - | 1134 | WP_001089729.1 | permease | - |
| KZY03_RS23985 (KZY03_23985) | 108203..108526 | + | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KZY03_RS23990 (KZY03_23990) | 108628..109325 | + | 698 | WP_223367361.1 | IS1 family transposase | - |
| KZY03_RS23995 (KZY03_23995) | 109733..110372 | + | 640 | Protein_113 | recombinase family protein | - |
| KZY03_RS24000 (KZY03_24000) | 110479..110808 | - | 330 | WP_000792637.1 | ester cyclase | - |
| KZY03_RS24005 (KZY03_24005) | 110889..111878 | - | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| KZY03_RS24010 (KZY03_24010) | 111894..112670 | - | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| KZY03_RS24015 (KZY03_24015) | 112943..113275 | + | 333 | Protein_117 | Ref family protein | - |
| KZY03_RS24020 (KZY03_24020) | 113354..114109 | + | 756 | WP_072649769.1 | hypothetical protein | - |
| KZY03_RS24025 (KZY03_24025) | 114163..114852 | - | 690 | WP_000452096.1 | EAL domain-containing protein | - |
| KZY03_RS24030 (KZY03_24030) | 115087..115808 | + | 722 | Protein_120 | helix-turn-helix domain-containing protein | - |
| KZY03_RS24035 (KZY03_24035) | 115847..116095 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| KZY03_RS24040 (KZY03_24040) | 116092..116532 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| KZY03_RS24045 (KZY03_24045) | 116566..118383 | - | 1818 | Protein_123 | helicase | - |
| KZY03_RS24050 (KZY03_24050) | 118996..119247 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| KZY03_RS24055 (KZY03_24055) | 119244..119531 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KZY03_RS25170 | 119899..120012 | - | 114 | Protein_126 | alkaline phosphatase | - |
| KZY03_RS24065 (KZY03_24065) | 120011..120216 | + | 206 | Protein_127 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|