MGE detailed information
MGE type: Genomic_island MGE length: 32760 bp
Accession: NZ_CP079923 Location: 916149..948908 Organism: Streptococcus pneumoniae strain Rx1 Replicon: chromosome
Accession: NZ_CP079923 Location: 916149..948908 Organism: Streptococcus pneumoniae strain Rx1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZH43_RS04555 (KZH43_04555) | 911433..912047 | + | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
| KZH43_RS04560 (KZH43_04560) | 912121..913095 | + | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| KZH43_RS04565 (KZH43_04565) | 913169..914800 | + | 1632 | WP_220041271.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| KZH43_RS04570 (KZH43_04570) | 915014..915292 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| KZH43_RS04575 (KZH43_04575) | 915538..915756 | + | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| KZH43_RS04580 (KZH43_04580) | 916149..917174 | + | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| KZH43_RS04585 (KZH43_04585) | 917164..918171 | + | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| KZH43_RS04590 (KZH43_04590) | 918171..919178 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| KZH43_RS04595 (KZH43_04595) | 919178..919972 | + | 795 | WP_220041272.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| KZH43_RS10520 | 920137..920307 | + | 171 | Protein_923 | IS3 family transposase | - |
| KZH43_RS04600 (KZH43_04600) | 920425..920748 | + | 324 | WP_229294054.1 | restriction endonuclease subunit S | - |
| KZH43_RS04605 (KZH43_04605) | 920729..921028 | + | 300 | Protein_925 | hypothetical protein | - |
| KZH43_RS04610 (KZH43_04610) | 921712..921873 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| KZH43_RS04615 (KZH43_04615) | 921965..923644 | + | 1680 | WP_000031832.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| KZH43_RS04620 (KZH43_04620) | 923912..924478 | + | 567 | WP_000234985.1 | hypothetical protein | - |
| KZH43_RS04625 (KZH43_04625) | 924800..924988 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| KZH43_RS04630 (KZH43_04630) | 925050..925865 | + | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| KZH43_RS04635 (KZH43_04635) | 925865..926719 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| KZH43_RS04640 (KZH43_04640) | 926831..927715 | + | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| KZH43_RS04645 (KZH43_04645) | 927878..929617 | + | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| KZH43_RS10525 | 929892..930347 | + | 456 | Protein_934 | hypothetical protein | - |
| KZH43_RS04660 (KZH43_04660) | 930792..931268 | + | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| KZH43_RS04665 (KZH43_04665) | 931268..932029 | + | 762 | WP_000405357.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| KZH43_RS04670 (KZH43_04670) | 932057..932833 | + | 777 | WP_258404908.1 | hypothetical protein | - |
| KZH43_RS10530 | 932836..933213 | + | 378 | WP_000530001.1 | hypothetical protein | - |
| KZH43_RS04675 (KZH43_04675) | 934045..934404 | + | 360 | WP_000529543.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| KZH43_RS04680 (KZH43_04680) | 934414..934743 | + | 330 | WP_000263037.1 | plasmid mobilization relaxosome protein MobC | - |
| KZH43_RS04685 (KZH43_04685) | 934766..936651 | + | 1886 | Protein_941 | SAG1250 family conjugative relaxase | - |
| KZH43_RS04690 (KZH43_04690) | 936696..937550 | - | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| KZH43_RS04695 (KZH43_04695) | 937631..937702 | + | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| KZH43_RS04700 (KZH43_04700) | 937802..939097 | + | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| KZH43_RS04705 (KZH43_04705) | 939099..939707 | + | 609 | WP_000709470.1 | PIG-L family deacetylase | - |
| KZH43_RS04710 (KZH43_04710) | 939717..940499 | + | 783 | WP_000809423.1 | sugar phosphate isomerase/epimerase | - |
| KZH43_RS10535 | 940522..940980 | + | 459 | WP_000710677.1 | hypothetical protein | - |
| KZH43_RS04715 (KZH43_04715) | 940956..942413 | + | 1458 | WP_225349792.1 | hypothetical protein | - |
| KZH43_RS04720 (KZH43_04720) | 942442..943548 | + | 1107 | WP_000444113.1 | hypothetical protein | - |
| KZH43_RS04725 (KZH43_04725) | 943571..944866 | + | 1296 | WP_000609550.1 | AMP-binding protein | - |
| KZH43_RS04730 (KZH43_04730) | 944868..946091 | + | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| KZH43_RS04735 (KZH43_04735) | 946081..947031 | + | 951 | WP_000389975.1 | hypothetical protein | - |
| KZH43_RS04740 (KZH43_04740) | 947046..948245 | + | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| KZH43_RS04745 (KZH43_04745) | 948279..948908 | + | 630 | WP_170835798.1 | Putative acetyltransferase EpsM | VF |
| KZH43_RS04750 (KZH43_04750) | 949291..950502 | + | 1212 | WP_000687010.1 | MFS transporter | - |
| KZH43_RS04755 (KZH43_04755) | 951161..951382 | + | 222 | WP_000286251.1 | helix-turn-helix transcriptional regulator | - |
| KZH43_RS04760 (KZH43_04760) | 951830..952140 | + | 311 | Protein_957 | transposase family protein | - |
| KZH43_RS04765 (KZH43_04765) | 952284..953513 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0 |