NZ_CP0798031..98922

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 98922 bp
Accession: NZ_CP079803        Location: 1..98922         Organism: Klebsiella variicola strain EMBL-1       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KU883_RS27265 (KU883_27250) 1..858 + 858 WP_004200825.1 incFII family plasmid replication initiator RepA -
KU883_RS27270 (KU883_27255) 1991..3049 + 1059 WP_071905682.1 patatin-like phospholipase family protein -
KU883_RS27275 (KU883_27260) 3036..4100 + 1065 WP_077138887.1 hypothetical protein -
KU883_RS27280 (KU883_27265) 4097..5866 + 1770 WP_015632531.1 ThiF family adenylyltransferase -
KU883_RS27285 (KU883_27270) 5841..6302 + 462 WP_032433950.1 Mov34/MPN/PAD-1 family protein -
KU883_RS27290 (KU883_27275) 6382..7132 - 751 Protein_5 IS3 family transposase -
KU883_RS27295 (KU883_27280) 7221..9050 + 1830 WP_015632533.1 NACHT domain-containing protein -
KU883_RS27300 (KU883_27285) 9422..9784 + 363 WP_015632534.1 DUF596 domain-containing protein -
KU883_RS27305 (KU883_27290) 10039..10515 - 477 WP_077143830.1 AraC family transcriptional regulator ligand-binding domain-containing protein -
KU883_RS27310 (KU883_27295) 10784..11704 - 921 WP_012540028.1 AraC family transcriptional regulator -
KU883_RS27315 (KU883_27300) 11809..12642 + 834 WP_004136823.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
KU883_RS27320 (KU883_27305) 12862..13857 - 996 WP_004136825.1 IS110 family transposase IS1663 Transposase
KU883_RS27325 (KU883_27310) 14311..15255 - 945 WP_077138888.1 alpha/beta hydrolase -
KU883_RS27330 (KU883_27315) 15641..16312 + 672 WP_219163330.1 SOS response-associated peptidase -
KU883_RS27335 (KU883_27320) 16523..17413 + 891 WP_077138865.1 DUF2971 domain-containing protein -
KU883_RS27340 (KU883_27325) 17550..17804 - 255 WP_044246670.1 hypothetical protein -
KU883_RS27345 (KU883_27330) 17921..18151 - 231 WP_049118762.1 hypothetical protein -
KU883_RS27350 (KU883_27335) 18165..18368 - 204 WP_009484305.1 HHA domain-containing protein -
KU883_RS27355 (KU883_27340) 18429..18923 - 495 WP_077138866.1 DNA-binding protein -
KU883_RS27360 (KU883_27345) 18957..19529 - 573 WP_145952621.1 hypothetical protein -
KU883_RS27365 (KU883_27350) 19526..19780 - 255 WP_032700773.1 hypothetical protein -
KU883_RS27370 (KU883_27355) 20060..22309 - 2250 WP_077138867.1 P-loop NTPase fold protein -
KU883_RS27375 (KU883_27360) 22311..23405 - 1095 WP_077138868.1 transcriptional regulator -
KU883_RS27380 (KU883_27365) 23999..24217 + 219 WP_015632547.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
KU883_RS27385 (KU883_27370) 24219..24524 + 306 WP_012539978.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
KU883_RS27390 (KU883_27375) 24711..25715 + 1005 WP_077138869.1 hypothetical protein -
KU883_RS27395 (KU883_27380) 25913..26692 + 780 WP_029497485.1 site-specific integrase -
KU883_RS27400 (KU883_27385) 26750..27007 - 258 WP_032433931.1 hypothetical protein -
KU883_RS27405 (KU883_27390) 27135..27248 - 114 WP_032072094.1 hypothetical protein -
KU883_RS27410 (KU883_27395) 27880..28635 + 756 WP_012539983.1 replication initiation protein RepE -
KU883_RS27415 (KU883_27400) 29426..30631 + 1206 WP_015632469.1 AAA family ATPase -
KU883_RS27420 (KU883_27405) 30631..31605 + 975 WP_032741647.1 ParB family protein -
KU883_RS27425 (KU883_27410) 31687..32958 - 1272 WP_077138871.1 Y-family DNA polymerase -
KU883_RS27430 (KU883_27415) 32958..33389 - 432 WP_020805749.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KU883_RS27435 (KU883_27420) 33622..34593 + 972 WP_077138872.1 plasmid segregation protein ParM -
KU883_RS27440 (KU883_27425) 34596..35267 + 672 WP_001568039.1 plasmid partitioning/stability family protein -
KU883_RS27445 (KU883_27430) 35329..35559 + 231 WP_048322267.1 hypothetical protein -
KU883_RS27450 (KU883_27435) 35731..35923 + 193 Protein_37 hypothetical protein -
KU883_RS27455 (KU883_27440) 35995..36696 + 702 WP_001568041.1 DNA methylase -
KU883_RS27460 (KU883_27445) 36696..36917 + 222 WP_032433933.1 hypothetical protein -
KU883_RS27465 (KU883_27450) 36927..37346 + 420 WP_049117709.1 DUF1380 family protein -
KU883_RS27470 (KU883_27455) 37400..38167 + 768 WP_077138873.1 hypothetical protein -
KU883_RS27475 (KU883_27460) 38847..39275 + 429 WP_065954393.1 antirestriction protein -
KU883_RS27480 (KU883_27465) 39320..39826 + 507 WP_219163332.1 antirestriction protein ArdA -
KU883_RS27485 (KU883_27470) 39869..40060 + 192 WP_049118528.1 hypothetical protein -
KU883_RS27490 (KU883_27475) 40254..40460 + 207 WP_219163334.1 DNA polymerase III subunit theta -
KU883_RS27495 (KU883_27480) 40457..40747 + 291 WP_101850686.1 hypothetical protein -
KU883_RS28165 40865..41083 - 219 Protein_47 hypothetical protein -
KU883_RS27500 (KU883_27485) 41409..41951 + 543 WP_101850685.1 single-stranded DNA-binding protein -
KU883_RS27505 (KU883_27490) 42000..42248 + 249 WP_101850684.1 DUF905 domain-containing protein -
KU883_RS27510 (KU883_27495) 42310..44310 + 2001 WP_020316902.1 ParB/RepB/Spo0J family partition protein -
KU883_RS27515 (KU883_27500) 44355..44786 + 432 WP_101862938.1 conjugation system SOS inhibitor PsiB -
KU883_RS27520 (KU883_27505) 44783..45511 + 729 WP_101862939.1 plasmid SOS inhibition protein A -
KU883_RS27525 (KU883_27510) 45508..45738 + 231 WP_223861286.1 hypothetical protein -
KU883_RS28170 46192..46305 + 114 Protein_54 DUF5431 family protein -
KU883_RS27530 (KU883_27515) 46253..46372 + 120 WP_223230170.1 Hok/Gef family protein -
KU883_RS27535 (KU883_27520) 46683..48095 - 1413 WP_060598838.1 amino acid permease -
KU883_RS27540 (KU883_27525) 48642..49544 - 903 WP_060598839.1 LysR substrate-binding domain-containing protein -
KU883_RS27545 (KU883_27530) 49827..50966 + 1140 WP_072122725.1 PLP-dependent aspartate aminotransferase family protein -
KU883_RS27550 (KU883_27535) 50987..51916 + 930 WP_158236771.1 DMT family transporter -
KU883_RS27555 (KU883_27540) 52032..52333 + 302 Protein_60 DDE-type integrase/transposase/recombinase -
KU883_RS27560 (KU883_27545) 52635..52946 + 312 WP_023292165.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
KU883_RS27565 (KU883_27550) 52943..53359 + 417 WP_072122726.1 helix-turn-helix domain-containing protein Antitoxin Detail
KU883_RS27570 (KU883_27555) 54176..54556 + 381 WP_077138875.1 hypothetical protein -
KU883_RS27575 (KU883_27560) 54622..54969 + 348 WP_077138876.1 hypothetical protein -
KU883_RS27580 (KU883_27565) 55057..55287 + 231 WP_004197732.1 hypothetical protein -
KU883_RS27585 (KU883_27570) 55334..56167 + 834 WP_077138877.1 N-6 DNA methylase -
KU883_RS27590 (KU883_27575) 56792..57322 + 531 WP_077138878.1 antirestriction protein -
KU883_RS27595 (KU883_27580) 57360..57767 - 408 WP_224230374.1 hypothetical protein VF
KU883_RS27600 (KU883_27585) 58261..58659 + 399 WP_077138880.1 conjugal transfer relaxosome DNA-binding protein TraM -
KU883_RS27605 (KU883_27590) 58832..59518 + 687 WP_060598875.1 transcriptional regulator TraJ family protein -
KU883_RS27610 (KU883_27595) 59597..59983 + 387 WP_004152495.1 TraY domain-containing protein -
KU883_RS27615 (KU883_27600) 60037..60405 + 369 WP_049155512.1 type IV conjugative transfer system pilin TraA -
KU883_RS27620 (KU883_27605) 60419..60724 + 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
KU883_RS27625 (KU883_27610) 60744..61310 + 567 WP_004194424.1 type IV conjugative transfer system protein TraE -
KU883_RS27630 (KU883_27615) 61297..62037 + 741 WP_060598874.1 type-F conjugative transfer system secretin TraK -
KU883_RS27635 (KU883_27620) 62037..63461 + 1425 WP_060598873.1 F-type conjugal transfer pilus assembly protein TraB -
KU883_RS27640 (KU883_27625) 63454..64050 + 597 WP_060598872.1 conjugal transfer pilus-stabilizing protein TraP -
KU883_RS27645 (KU883_27630) 64073..64657 + 585 WP_060598871.1 type IV conjugative transfer system lipoprotein TraV -
KU883_RS27650 (KU883_27635) 64789..65199 + 411 WP_060598870.1 hypothetical protein -
KU883_RS27655 (KU883_27640) 65204..65488 + 285 WP_060598886.1 hypothetical protein -
KU883_RS27660 (KU883_27645) 65512..65736 + 225 WP_060598869.1 hypothetical protein -
KU883_RS27665 (KU883_27650) 65729..66040 + 312 WP_077138882.1 hypothetical protein -
KU883_RS27670 (KU883_27655) 66107..66511 + 405 WP_060598867.1 hypothetical protein -
KU883_RS27675 (KU883_27660) 66554..66877 + 324 WP_072124277.1 hypothetical protein -
KU883_RS27680 (KU883_27665) 66885..67283 + 399 WP_072198239.1 hypothetical protein -
KU883_RS27685 (KU883_27670) 67355..69994 + 2640 WP_219163328.1 type IV secretion system protein TraC -
KU883_RS27690 (KU883_27675) 69994..70383 + 390 WP_020803372.1 type-F conjugative transfer system protein TrbI -
KU883_RS27695 (KU883_27680) 70383..71009 + 627 WP_020314628.1 type-F conjugative transfer system protein TraW -
KU883_RS27700 (KU883_27685) 71053..72012 + 960 WP_029497356.1 conjugal transfer pilus assembly protein TraU -
KU883_RS27705 (KU883_27690) 72027..72575 + 549 WP_022631518.1 hypothetical protein -
KU883_RS27710 (KU883_27695) 72550..73239 - 690 WP_032427592.1 hypothetical protein -
KU883_RS27715 (KU883_27700) 73296..73898 + 603 WP_077138883.1 hypothetical protein -
KU883_RS27720 (KU883_27705) 74043..74690 + 648 WP_039698503.1 type-F conjugative transfer system pilin assembly protein TrbC -
KU883_RS27725 (KU883_27710) 74749..76704 + 1956 WP_060598862.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KU883_RS27730 (KU883_27715) 76737..77018 + 282 WP_022644736.1 hypothetical protein -
KU883_RS27735 (KU883_27720) 77008..77235 + 228 WP_012540032.1 conjugal transfer protein TrbE -
KU883_RS27740 (KU883_27725) 77246..77572 + 327 WP_012539967.1 hypothetical protein -
KU883_RS27745 (KU883_27730) 77593..78345 + 753 WP_004152677.1 type-F conjugative transfer system pilin assembly protein TraF -
KU883_RS27750 (KU883_27735) 78356..78595 + 240 WP_023340931.1 type-F conjugative transfer system pilin chaperone TraQ -
KU883_RS27755 (KU883_27740) 78567..79124 + 558 WP_032433944.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KU883_RS27760 (KU883_27745) 79170..79613 + 444 WP_040172400.1 F-type conjugal transfer protein TrbF -
KU883_RS27765 (KU883_27750) 79591..80970 + 1380 WP_072198238.1 conjugal transfer pilus assembly protein TraH -
KU883_RS27770 (KU883_27755) 80970..83792 + 2823 WP_060598861.1 conjugal transfer mating-pair stabilization protein TraG -
KU883_RS27775 (KU883_27760) 83816..84418 + 603 WP_048263624.1 hypothetical protein -
KU883_RS27780 (KU883_27765) 84669..85400 + 732 WP_016831056.1 conjugal transfer complement resistance protein TraT -
KU883_RS27785 (KU883_27770) 85760..88060 + 2301 WP_060598860.1 type IV conjugative transfer system coupling protein TraD -
KU883_RS27790 (KU883_27775) 88060..93321 + 5262 WP_077138884.1 Multifunctional conjugation protein TraI Relaxase
KU883_RS27795 (KU883_27780) 93411..94136 + 726 WP_025712712.1 type-F conjugative transfer system pilin acetylase TraX -
KU883_RS27800 (KU883_27785) 94291..94887 + 597 WP_077138885.1 fertility inhibition protein FinO -
KU883_RS27805 (KU883_27790) 94908..95255 + 348 WP_015632524.1 DUF6404 family protein -
KU883_RS27810 (KU883_27795) 95726..96370 + 645 WP_049246155.1 hypothetical protein -
KU883_RS27815 (KU883_27800) 96426..97076 + 651 WP_060598856.1 DUF2726 domain-containing protein -
KU883_RS27820 (KU883_27805) 97073..97381 + 309 WP_070612642.1 hypothetical protein -
KU883_RS27825 (KU883_27810) 97487..98038 + 552 WP_060598885.1 phospholipase D family protein -
KU883_RS27830 (KU883_27815) 98358..98636 + 279 WP_004199332.1 replication regulatory protein RepA -
KU883_RS27260 (KU883_27245) 98736..98910 + 175 Protein_116 protein CopA/IncA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance