MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33587 bp
Accession: NZ_CP079775 Location: 1..33587 Organism: Escherichia coli strain GS04 Replicon: plasmid pGS04EC-3
Accession: NZ_CP079775 Location: 1..33587 Organism: Escherichia coli strain GS04 Replicon: plasmid pGS04EC-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX57_RS23545 (KYX57_23450) | 1..349 | + | 349 | WP_259483226.1 | Type IV secretion system protein PtlH | VF |
| KYX57_RS23550 (KYX57_23455) | 336..2198 | + | 1863 | WP_170324155.1 | relaxosome-coupling protein TaxB | - |
| KYX57_RS23555 (KYX57_23460) | 2207..2629 | + | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| KYX57_RS23560 (KYX57_23465) | 2613..2918 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KYX57_RS23565 (KYX57_23470) | 2924..3178 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| KYX57_RS23570 (KYX57_23475) | 3281..3589 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| KYX57_RS23575 (KYX57_23480) | 3586..4080 | + | 495 | WP_001215680.1 | thermonuclease family protein | - |
| KYX57_RS23580 (KYX57_23485) | 4096..4500 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| KYX57_RS23585 (KYX57_23490) | 4606..5181 | + | 576 | WP_001199074.1 | hypothetical protein | - |
| KYX57_RS23590 (KYX57_23495) | 5186..7339 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| KYX57_RS23595 (KYX57_23500) | 7336..7542 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| KYX57_RS23600 (KYX57_23505) | 7560..8024 | + | 465 | WP_001293134.1 | H-NS family nucleoid-associated regulatory protein | - |
| KYX57_RS23605 (KYX57_23510) | 8423..10048 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| KYX57_RS23610 (KYX57_23515) | 10120..10842 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| KYX57_RS23615 (KYX57_23520) | 12132..12779 | + | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| KYX57_RS23620 (KYX57_23525) | 12854..13123 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| KYX57_RS23625 (KYX57_23530) | 13284..14134 | + | 851 | Protein_16 | DUF2806 domain-containing protein | - |
| KYX57_RS23630 (KYX57_23535) | 14286..14813 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| KYX57_RS23635 (KYX57_23540) | 14948..15352 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| KYX57_RS23640 (KYX57_23545) | 15365..16237 | - | 873 | WP_001398251.1 | replication initiation protein | - |
| KYX57_RS23645 (KYX57_23550) | 17646..18161 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| KYX57_RS23650 (KYX57_23555) | 18266..18808 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| KYX57_RS23655 (KYX57_23560) | 18805..19056 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| KYX57_RS23660 (KYX57_23565) | 19043..19270 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| KYX57_RS23665 (KYX57_23570) | 19724..20023 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| KYX57_RS23670 (KYX57_23575) | 20114..20464 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| KYX57_RS23675 (KYX57_23580) | 20769..21017 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KYX57_RS23680 (KYX57_23585) | 21014..21361 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KYX57_RS23685 (KYX57_23590) | 21722..22225 | + | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| KYX57_RS23690 (KYX57_23595) | 22229..23458 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| KYX57_RS23695 (KYX57_23600) | 23535..23828 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| KYX57_RS23700 (KYX57_23605) | 23825..24040 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| KYX57_RS23705 (KYX57_23610) | 24396..25016 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| KYX57_RS23710 (KYX57_23615) | 25030..25356 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| KYX57_RS23715 (KYX57_23620) | 25375..28122 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| KYX57_RS23720 (KYX57_23625) | 28134..28850 | + | 717 | WP_181365839.1 | type IV secretion system protein | - |
| KYX57_RS23725 (KYX57_23630) | 28862..29956 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| KYX57_RS23730 (KYX57_23635) | 30471..31157 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| KYX57_RS23735 (KYX57_23640) | 31154..32062 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| KYX57_RS23740 (KYX57_23645) | 32055..33173 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| KYX57_RS23745 (KYX57_23650) | 33175..33587 | + | 413 | WP_259483236.1 | ATPase, T2SS/T4P/T4SS family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|