MGE detailed information
MGE type: Prophage MGE length: 64383 bp
Accession: NZ_CP079770 Location: 4136906..4201288 Organism: Escherichia coli strain HL15 Replicon: chromosome
Accession: NZ_CP079770 Location: 4136906..4201288 Organism: Escherichia coli strain HL15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX58_RS21845 (4133314) | 4133314..4134384 | + | 1071 | WP_000837747.1 | LacI family DNA-binding transcriptional regulator | - |
| KYX58_RS21850 (4134717) | 4134717..4135230 | + | 514 | Protein_3981 | transposase | - |
| KYX58_RS21855 (4135228) | 4135228..4135782 | - | 555 | Protein_3982 | TonB-dependent receptor plug domain-containing protein | - |
| KYX58_RS21860 (4136211) | 4136211..4136843 | + | 633 | Protein_3983 | GTPase family protein | - |
| KYX58_RS21865 (4136906) | 4136906..4138083 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| KYX58_RS21870 (4138091) | 4138091..4138345 | + | 255 | Protein_3985 | GTPase family protein | - |
| KYX58_RS21875 (4138639) | 4138639..4140051 | + | 1413 | Protein_3986 | autotransporter adhesin family protein | - |
| KYX58_RS21880 (4140123) | 4140123..4141300 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| KYX58_RS21885 (4141310) | 4141310..4142746 | + | 1437 | Protein_3988 | autotransporter adhesin family protein | - |
| KYX58_RS21890 (4142817) | 4142817..4143050 | + | 234 | WP_047928875.1 | DUF905 family protein | - |
| KYX58_RS21895 (4143141) | 4143141..4143959 | + | 819 | WP_096935434.1 | DUF932 domain-containing protein | - |
| KYX58_RS21900 (4143959) | 4143959..4144228 | + | 270 | WP_259553614.1 | hypothetical protein | - |
| KYX58_RS21905 (4144297) | 4144297..4144770 | + | 474 | WP_001355870.1 | antirestriction protein | - |
| KYX58_RS21910 (4144786) | 4144786..4145262 | + | 477 | WP_001186770.1 | RadC family protein | - |
| KYX58_RS21915 (4145331) | 4145331..4145552 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| KYX58_RS21920 (4145571) | 4145571..4146218 | + | 648 | WP_114493062.1 | antitoxin of toxin-antitoxin stability system | - |
| KYX58_RS21925 (4146268) | 4146268..4146636 | + | 369 | WP_047928872.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KYX58_RS21930 (4146726) | 4146726..4147103 | + | 378 | WP_047928871.1 | TA system toxin CbtA family protein | Toxin Detail |
| KYX58_RS21935 (4147100) | 4147100..4147249 | + | 150 | Protein_3998 | DUF5983 family protein | - |
| KYX58_RS21940 (4147325) | 4147325..4147522 | + | 198 | WP_096093965.1 | DUF957 domain-containing protein | - |
| KYX58_RS21945 (4147607) | 4147607..4148452 | + | 846 | WP_072650597.1 | DUF4942 domain-containing protein | - |
| KYX58_RS21955 (4148752) | 4148752..4149258 | + | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| KYX58_RS21960 (4149337) | 4149337..4151178 | - | 1842 | WP_000437375.1 | RNA polymerase sigma factor RpoD | - |
| KYX58_RS21965 (4151373) | 4151373..4153118 | - | 1746 | WP_000918827.1 | DNA primase | - |
| KYX58_RS21970 (4153229) | 4153229..4153444 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| KYX58_RS21975 (4153682) | 4153682..4154695 | + | 1014 | WP_001264352.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| KYX58_RS21980 (4154738) | 4154738..4156201 | - | 1464 | WP_000804973.1 | L-tartrate/succinate antiporter | - |
| KYX58_RS21985 (4156249) | 4156249..4156854 | - | 606 | WP_000722957.1 | L(+)-tartrate dehydratase subunit beta | - |
| KYX58_RS21990 (4156851) | 4156851..4157762 | - | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| KYX58_RS21995 (4157969) | 4157969..4158901 | + | 933 | WP_000935206.1 | DNA-binding transcriptional activator TtdR | - |
| KYX58_RS22000 (4158914) | 4158914..4159531 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| KYX58_RS22005 (4159636) | 4159636..4160004 | + | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| KYX58_RS22010 (4160094) | 4160094..4160915 | + | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| KYX58_RS22015 (4161096) | 4161096..4162334 | - | 1239 | WP_000708487.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| KYX58_RS22020 (4162398) | 4162398..4163018 | - | 621 | WP_001125331.1 | TIGR04211 family SH3 domain-containing protein | - |
| KYX58_RS22025 (4163260) | 4163260..4164561 | + | 1302 | WP_000046281.1 | inorganic triphosphatase | - |
| KYX58_RS22030 (4164584) | 4164584..4167424 | + | 2841 | WP_259553621.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| KYX58_RS22035 (4167472) | 4167472..4168905 | + | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| KYX58_RS22040 (4169025) | 4169025..4169084 | - | 60 | WP_010723221.1 | type I toxin-antitoxin system toxin IbsE | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_2 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_2 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_2 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_2 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_3 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_3 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_3 | - | - |
| - (4168985) | 4168985..4169126 | + | 142 | NuclAT_3 | - | - |
| KYX58_RS22045 (4169400) | 4169400..4169459 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_1 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_1 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_1 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_1 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_4 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_4 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_4 | - | - |
| - (4169360) | 4169360..4169502 | + | 143 | NuclAT_4 | - | - |
| KYX58_RS22050 (4169700) | 4169700..4171361 | - | 1662 | WP_001311137.1 | flotillin family protein | - |
| KYX58_RS22055 (4171388) | 4171388..4172017 | - | 630 | WP_000599926.1 | DUF1449 family protein | - |
| KYX58_RS22060 (4172286) | 4172286..4172486 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| KYX58_RS22065 (4172529) | 4172529..4173594 | - | 1066 | Protein_4023 | fimbrial protein | - |
| KYX58_RS22070 (4173596) | 4173596..4174045 | - | 450 | Protein_4024 | putative fimbrial chaperone YcbF | VF |
| KYX58_RS22075 (4174100) | 4174100..4174797 | + | 698 | WP_094096600.1 | IS1 family transposase IS1G | Transposase |
| KYX58_RS22080 (4174811) | 4174811..4175122 | - | 312 | Protein_4026 | putative fimbrial chaperone YfcS | VF |
| KYX58_RS22085 (4175138) | 4175138..4177603 | - | 2466 | WP_000016375.1 | Outer membrane usher protein PapC | VF |
| KYX58_RS22095 (4179038) | 4179038..4179589 | - | 552 | WP_001272145.1 | putative fimbrial-like protein YbgD | VF |
| KYX58_RS22100 (4179873) | 4179873..4180163 | - | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| KYX58_RS22105 (4180537) | 4180537..4181190 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| KYX58_RS22110 (4181452) | 4181452..4181622 | + | 171 | WP_000469266.1 | protein YqiD | - |
| KYX58_RS22115 (4181680) | 4181680..4182453 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| KYX58_RS22120 (4182596) | 4182596..4183384 | + | 789 | WP_001320780.1 | 4,5-DOPA dioxygenase extradiol | - |
| KYX58_RS22125 (4183422) | 4183422..4184582 | - | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| KYX58_RS22130 (4184588) | 4184588..4185259 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| KYX58_RS22135 (4185407) | 4185407..4186888 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| KYX58_RS22140 (4187093) | 4187093..4187722 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| KYX58_RS22145 (4187723) | 4187723..4188145 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| KYX58_RS22150 (4188170) | 4188170..4188997 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| KYX58_RS22155 (4188997) | 4188997..4189578 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| KYX58_RS22160 (4189607) | 4189607..4191499 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| KYX58_RS22165 (4191547) | 4191547..4191861 | - | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| KYX58_RS22170 (4191892) | 4191892..4192473 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| KYX58_RS22175 (4192792) | 4192792..4193124 | + | 333 | WP_000917684.1 | DUF2645 family protein | - |
| KYX58_RS22180 (4193170) | 4193170..4194519 | - | 1350 | WP_000673402.1 | quorum sensing histidine kinase QseC | - |
| KYX58_RS22185 (4194516) | 4194516..4195175 | - | 660 | WP_001221495.1 | Transcriptional regulatory protein QseB | VF |
| KYX58_RS22190 (4195327) | 4195327..4195719 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| KYX58_RS22195 (4195772) | 4195772..4196254 | + | 483 | WP_000183505.1 | GyrI-like domain-containing protein | - |
| KYX58_RS22200 (4196459) | 4196459..4196755 | + | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| KYX58_RS22205 (4196757) | 4196757..4197152 | + | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| KYX58_RS22210 (4197285) | 4197285..4198892 | + | 1608 | WP_001295629.1 | ABC transporter substrate-binding protein | - |
| KYX58_RS22215 (4199030) | 4199030..4201288 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| KYX58_RS22220 (4201522) | 4201522..4202259 | + | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| KYX58_RS22225 (4202334) | 4202334..4203746 | + | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| KYX58_RS22230 (4203857) | 4203857..4206076 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|