MGE detailed information
MGE type: Prophage MGE length: 64383 bp
Accession: NZ_CP079767 Location: 4131712..4196094 Organism: Escherichia coli strain SF10 Replicon: chromosome
Accession: NZ_CP079767 Location: 4131712..4196094 Organism: Escherichia coli strain SF10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KX927_RS22505 (4128120) | 4128120..4129190 | + | 1071 | WP_000837747.1 | LacI family DNA-binding transcriptional regulator | - |
| KX927_RS22510 (4129523) | 4129523..4130036 | + | 514 | Protein_3988 | transposase | - |
| KX927_RS22515 (4130034) | 4130034..4130588 | - | 555 | Protein_3989 | TonB-dependent receptor plug domain-containing protein | - |
| KX927_RS22520 (4131017) | 4131017..4131649 | + | 633 | Protein_3990 | GTPase family protein | - |
| KX927_RS22525 (4131712) | 4131712..4132889 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| KX927_RS22530 (4132897) | 4132897..4133151 | + | 255 | Protein_3992 | GTPase family protein | - |
| KX927_RS22535 (4133445) | 4133445..4134857 | + | 1413 | Protein_3993 | AIDA repeat-containing protein | - |
| KX927_RS22540 (4134929) | 4134929..4136106 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| KX927_RS22545 (4136116) | 4136116..4137552 | + | 1437 | Protein_3995 | autotransporter domain-containing protein | - |
| KX927_RS22550 (4137623) | 4137623..4137856 | + | 234 | WP_047928875.1 | DUF905 family protein | - |
| KX927_RS22555 (4137947) | 4137947..4138765 | + | 819 | WP_096935434.1 | DUF932 domain-containing protein | - |
| KX927_RS22560 (4138765) | 4138765..4139034 | + | 270 | WP_259553614.1 | hypothetical protein | - |
| KX927_RS22565 (4139103) | 4139103..4139576 | + | 474 | WP_001355870.1 | antirestriction protein | - |
| KX927_RS22570 (4139592) | 4139592..4140068 | + | 477 | WP_001186770.1 | RadC family protein | - |
| KX927_RS22575 (4140137) | 4140137..4140358 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| KX927_RS22580 (4140377) | 4140377..4141024 | + | 648 | WP_114493062.1 | antitoxin of toxin-antitoxin stability system | - |
| KX927_RS22585 (4141074) | 4141074..4141442 | + | 369 | WP_047928872.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KX927_RS22590 (4141532) | 4141532..4141909 | + | 378 | WP_047928871.1 | TA system toxin CbtA family protein | Toxin Detail |
| KX927_RS22595 (4141906) | 4141906..4142055 | + | 150 | Protein_4005 | DUF5983 family protein | - |
| KX927_RS22600 (4142131) | 4142131..4142328 | + | 198 | WP_096093965.1 | DUF957 domain-containing protein | - |
| KX927_RS22605 (4142413) | 4142413..4143258 | + | 846 | WP_072650597.1 | DUF4942 domain-containing protein | - |
| KX927_RS22615 (4143558) | 4143558..4144064 | + | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| KX927_RS22620 (4144143) | 4144143..4145984 | - | 1842 | WP_000437375.1 | RNA polymerase sigma factor RpoD | - |
| KX927_RS22625 (4146179) | 4146179..4147924 | - | 1746 | WP_000918827.1 | DNA primase | - |
| KX927_RS22630 (4148035) | 4148035..4148250 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| KX927_RS22635 (4148488) | 4148488..4149501 | + | 1014 | WP_001264352.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| KX927_RS22640 (4149544) | 4149544..4151007 | - | 1464 | WP_000804973.1 | L-tartrate/succinate antiporter | - |
| KX927_RS22645 (4151055) | 4151055..4151660 | - | 606 | WP_000722957.1 | L(+)-tartrate dehydratase subunit beta | - |
| KX927_RS22650 (4151657) | 4151657..4152568 | - | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| KX927_RS22655 (4152775) | 4152775..4153707 | + | 933 | WP_000935206.1 | DNA-binding transcriptional activator TtdR | - |
| KX927_RS22660 (4153720) | 4153720..4154337 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| KX927_RS22665 (4154442) | 4154442..4154810 | + | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| KX927_RS22670 (4154900) | 4154900..4155721 | + | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| KX927_RS22675 (4155902) | 4155902..4157140 | - | 1239 | WP_000708487.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| KX927_RS22680 (4157204) | 4157204..4157824 | - | 621 | WP_001125331.1 | TIGR04211 family SH3 domain-containing protein | - |
| KX927_RS22685 (4158066) | 4158066..4159367 | + | 1302 | WP_000046281.1 | inorganic triphosphatase | - |
| KX927_RS22690 (4159390) | 4159390..4162230 | + | 2841 | WP_259553621.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| KX927_RS22695 (4162278) | 4162278..4163711 | + | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| KX927_RS22700 (4163831) | 4163831..4163890 | - | 60 | WP_010723221.1 | type I toxin-antitoxin system toxin IbsE | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_2 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_2 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_2 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_2 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_3 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_3 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_3 | - | - |
| - (4163791) | 4163791..4163932 | + | 142 | NuclAT_3 | - | - |
| KX927_RS22705 (4164206) | 4164206..4164265 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_1 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_1 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_1 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_1 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_4 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_4 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_4 | - | - |
| - (4164166) | 4164166..4164308 | + | 143 | NuclAT_4 | - | - |
| KX927_RS22710 (4164506) | 4164506..4166167 | - | 1662 | WP_001311137.1 | flotillin family protein | - |
| KX927_RS22715 (4166194) | 4166194..4166823 | - | 630 | WP_000599926.1 | DUF1449 family protein | - |
| KX927_RS22720 (4167092) | 4167092..4167292 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| KX927_RS22725 (4167335) | 4167335..4168400 | - | 1066 | Protein_4030 | hypothetical protein | - |
| KX927_RS22730 (4168402) | 4168402..4168851 | - | 450 | Protein_4031 | putative fimbrial chaperone YcbF | VF |
| KX927_RS22735 (4168906) | 4168906..4169603 | + | 698 | WP_094096600.1 | IS1 family transposase IS1G | Transposase |
| KX927_RS22740 (4169617) | 4169617..4169928 | - | 312 | Protein_4033 | putative fimbrial chaperone YfcS | VF |
| KX927_RS22745 (4169944) | 4169944..4172409 | - | 2466 | WP_000016375.1 | Outer membrane usher protein PapC | VF |
| KX927_RS22755 (4173844) | 4173844..4174395 | - | 552 | WP_001272145.1 | putative fimbrial-like protein YbgD | VF |
| KX927_RS22760 (4174679) | 4174679..4174969 | - | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| KX927_RS22765 (4175343) | 4175343..4175996 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| KX927_RS22770 (4176258) | 4176258..4176428 | + | 171 | WP_000469266.1 | protein YqiD | - |
| KX927_RS22775 (4176486) | 4176486..4177259 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| KX927_RS22780 (4177402) | 4177402..4178190 | + | 789 | WP_001320780.1 | 4,5-DOPA dioxygenase extradiol | - |
| KX927_RS22785 (4178228) | 4178228..4179388 | - | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| KX927_RS22790 (4179394) | 4179394..4180065 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| KX927_RS22795 (4180213) | 4180213..4181694 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| KX927_RS22800 (4181899) | 4181899..4182528 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| KX927_RS22805 (4182529) | 4182529..4182951 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| KX927_RS22810 (4182976) | 4182976..4183803 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| KX927_RS22815 (4183803) | 4183803..4184384 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| KX927_RS22820 (4184413) | 4184413..4186305 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| KX927_RS22825 (4186353) | 4186353..4186667 | - | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| KX927_RS22830 (4186698) | 4186698..4187279 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| KX927_RS22835 (4187598) | 4187598..4187930 | + | 333 | WP_000917684.1 | DUF2645 family protein | - |
| KX927_RS22840 (4187976) | 4187976..4189325 | - | 1350 | WP_000673402.1 | quorum sensing histidine kinase QseC | - |
| KX927_RS22845 (4189322) | 4189322..4189981 | - | 660 | WP_001221495.1 | Transcriptional regulatory protein QseB | VF |
| KX927_RS22850 (4190133) | 4190133..4190525 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| KX927_RS22855 (4190578) | 4190578..4191060 | + | 483 | WP_000183505.1 | GyrI-like domain-containing protein | - |
| KX927_RS22860 (4191265) | 4191265..4191561 | + | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| KX927_RS22865 (4191563) | 4191563..4191958 | + | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| KX927_RS22870 (4192091) | 4192091..4193698 | + | 1608 | WP_001295629.1 | ABC transporter substrate-binding protein | - |
| KX927_RS22875 (4193836) | 4193836..4196094 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| KX927_RS22880 (4196328) | 4196328..4197065 | + | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| KX927_RS22885 (4197140) | 4197140..4198552 | + | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| KX927_RS22890 (4198663) | 4198663..4200882 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|