MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP079767 Location: 2994163..3003513 Organism: Escherichia coli strain SF10 Replicon: chromosome
Accession: NZ_CP079767 Location: 2994163..3003513 Organism: Escherichia coli strain SF10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KX927_RS17025 (2989965) | 2989965..2990303 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KX927_RS17030 (2990279) | 2990279..2991976 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| KX927_RS17035 (2992013) | 2992013..2992588 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| KX927_RS17050 (2994163) | 2994163..2995701 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KX927_RS17055 (2996066) | 2996066..2997400 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KX927_RS17060 (2997480) | 2997480..2999627 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KX927_RS17065 (2999686) | 2999686..3001143 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KX927_RS17070 (3001380) | 3001380..3002897 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KX927_RS17075 (3003016) | 3003016..3003189 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KX927_RS17080 (3003217) | 3003217..3003513 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KX927_RS17085 (3003740) | 3003740..3004012 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| KX927_RS17090 (3004024) | 3004024..3004254 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KX927_RS17095 (3004435) | 3004435..3006066 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| KX927_RS17100 (3006063) | 3006063..3006782 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |