MGE detailed information
MGE type: Mobilizable plasmid MGE length: 127890 bp
Accession: NZ_CP079766 Location: 1..127890 Organism: Escherichia coli strain SF10 Replicon: plasmid pSF10EC-2
Accession: NZ_CP079766 Location: 1..127890 Organism: Escherichia coli strain SF10 Replicon: plasmid pSF10EC-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KX927_RS01435 (KX927_01420) | 1223..2203 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| KX927_RS01440 (KX927_01425) | 2244..2870 | - | 627 | WP_259559968.1 | maturation control protein | - |
| KX927_RS01445 (KX927_01430) | 3059..3391 | - | 333 | Protein_3 | Ref family protein | - |
| KX927_RS01450 (KX927_01435) | 3664..4440 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| KX927_RS01455 (KX927_01440) | 4456..5445 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| KX927_RS01460 (KX927_01445) | 5526..5879 | + | 354 | WP_232379234.1 | ester cyclase | - |
| KX927_RS01465 (KX927_01450) | 6013..6351 | - | 339 | WP_164708664.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| KX927_RS01470 (KX927_01455) | 6328..7032 | + | 705 | WP_001067855.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| KX927_RS01475 (KX927_01460) | 7038..7178 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| KX927_RS01480 (KX927_01465) | 7664..8401 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KX927_RS01485 (KX927_01470) | 8398..8622 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| KX927_RS01490 (KX927_01475) | 8833..10326 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| KX927_RS01495 | 10357..11241 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| KX927_RS01500 (KX927_01485) | 11458..12672 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| KX927_RS01505 (KX927_01490) | 12700..12996 | + | 297 | WP_259559981.1 | HTH-type transcriptional regulator CynR | VF |
| KX927_RS01510 (KX927_01495) | 13030..13734 | - | 705 | WP_086525284.1 | IS6 family transposase IS26 | Transposase |
| KX927_RS01515 (KX927_01500) | 13801..14417 | - | 617 | Protein_17 | transposase | - |
| KX927_RS01520 (KX927_01505) | 14812..15468 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| KX927_RS01525 (KX927_01510) | 15787..16215 | - | 429 | Protein_19 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KX927_RS01530 (KX927_01515) | 16248..17639 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| KX927_RS01535 (KX927_01520) | 17676..18248 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KX927_RS01540 (KX927_01525) | 18385..18930 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| KX927_RS01545 (KX927_01530) | 19093..19335 | + | 243 | WP_000844627.1 | transposase | - |
| KX927_RS01550 (KX927_01535) | 19367..20017 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KX927_RS01555 (KX927_01540) | 20123..21322 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| KX927_RS01560 (KX927_01545) | 21354..22238 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KX927_RS01565 (KX927_01550) | 22376..22768 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| KX927_RS01570 (KX927_01555) | 22772..24523 | + | 1752 | Protein_28 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KX927_RS01575 (KX927_01560) | 24731..25042 | - | 312 | WP_016246567.1 | hypothetical protein | - |
| KX927_RS01580 (KX927_01565) | 25093..26124 | - | 1032 | WP_000067534.1 | site-specific integrase | - |
| KX927_RS01585 (KX927_01570) | 26132..26353 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| KX927_RS01590 (KX927_01575) | 26958..27167 | + | 210 | WP_032195054.1 | hypothetical protein | - |
| KX927_RS01595 (KX927_01580) | 27278..28129 | + | 852 | WP_000611666.1 | phage repressor protein C1 | - |
| KX927_RS01600 (KX927_01585) | 28162..29028 | - | 867 | WP_259559990.1 | phage antirepressor KilAC domain-containing protein | - |
| KX927_RS01605 (KX927_01590) | 29152..29496 | - | 345 | WP_259559992.1 | Late promoter-activating protein | - |
| KX927_RS01610 (KX927_01595) | 29663..30706 | - | 1044 | WP_259559994.1 | DUF968 domain-containing protein | - |
| KX927_RS01615 (KX927_01600) | 30734..30913 | - | 180 | WP_000113019.1 | hypothetical protein | - |
| KX927_RS01620 (KX927_01605) | 30918..31298 | - | 381 | WP_259559996.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KX927_RS01625 (KX927_01610) | 31298..31519 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KX927_RS01630 (KX927_01615) | 31702..33258 | + | 1557 | WP_259560012.1 | type I restriction-modification system subunit M | - |
| KX927_RS01635 (KX927_01620) | 33255..34469 | + | 1215 | Protein_41 | restriction endonuclease subunit S | - |
| KX927_RS01640 (KX927_01625) | 34591..37707 | + | 3117 | WP_259559997.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KX927_RS01645 (KX927_01630) | 37972..38478 | - | 507 | WP_000021766.1 | hypothetical protein | - |
| KX927_RS01650 (KX927_01635) | 38551..39813 | - | 1263 | WP_063501795.1 | hypothetical protein | - |
| KX927_RS01655 (KX927_01640) | 40104..40817 | - | 714 | WP_077392714.1 | hypothetical protein | - |
| KX927_RS01660 (KX927_01645) | 40814..41491 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| KX927_RS01665 (KX927_01650) | 41488..42024 | - | 537 | WP_171961292.1 | hypothetical protein | - |
| KX927_RS01670 (KX927_01655) | 42012..42512 | - | 501 | WP_023153720.1 | hypothetical protein | - |
| KX927_RS01675 (KX927_01660) | 42615..42770 | - | 156 | WP_001567997.1 | hypothetical protein | - |
| KX927_RS01680 (KX927_01665) | 42837..43148 | - | 312 | Protein_50 | VRR-NUC domain-containing protein | - |
| KX927_RS01685 (KX927_01670) | 43159..43648 | - | 490 | Protein_51 | IS3 family transposase | - |
| KX927_RS01690 (KX927_01675) | 43729..43968 | - | 240 | Protein_52 | group II intron reverse transcriptase/maturase | - |
| KX927_RS01695 (KX927_01680) | 44001..44969 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| KX927_RS01700 (KX927_01685) | 45120..45746 | + | 627 | WP_032306837.1 | dimethylsulfoxide reductase subunit B | - |
| KX927_RS01705 (KX927_01690) | 45749..46576 | + | 828 | WP_033550846.1 | dimethyl sulfoxide reductase anchor subunit | - |
| KX927_RS01710 (KX927_01695) | 46615..49038 | + | 2424 | WP_042004625.1 | molybdopterin-dependent oxidoreductase | - |
| KX927_RS01715 (KX927_01700) | 49121..49768 | + | 648 | WP_042004624.1 | molecular chaperone TorD family protein | - |
| KX927_RS01720 (KX927_01705) | 49961..51628 | + | 1668 | WP_259560008.1 | energy-dependent translational throttle protein EttA | - |
| KX927_RS01725 (KX927_01710) | 51744..52028 | + | 285 | WP_029396284.1 | hypothetical protein | - |
| KX927_RS01735 (KX927_01720) | 52815..53471 | - | 657 | WP_029396361.1 | response regulator | - |
| KX927_RS01740 (KX927_01725) | 53483..55240 | - | 1758 | WP_032306943.1 | sensor histidine kinase | - |
| KX927_RS01745 (KX927_01730) | 55503..55910 | - | 408 | WP_029396360.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| KX927_RS01750 (KX927_01735) | 56041..56738 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KX927_RS01755 (KX927_01740) | 57692..58963 | - | 1272 | WP_232586567.1 | GGDEF domain-containing protein | - |
| KX927_RS01760 (KX927_01745) | 59026..61338 | - | 2313 | WP_259560011.1 | EAL domain-containing protein | - |
| KX927_RS01765 (KX927_01750) | 61827..62826 | + | 1000 | Protein_67 | IS110 family transposase | - |
| KX927_RS01770 (KX927_01755) | 63023..63994 | - | 972 | WP_063501658.1 | IS481 family transposase ISEc18 | Transposase |
| KX927_RS01775 (KX927_01760) | 64839..65015 | - | 177 | WP_157902697.1 | hypothetical protein | - |
| KX927_RS01785 (KX927_01770) | 66202..66333 | - | 132 | Protein_71 | IS3 family transposase | - |
| KX927_RS01790 (KX927_01775) | 66615..67973 | + | 1359 | WP_000823242.1 | esterase-like activity of phytase family protein | - |
| KX927_RS01795 | 68095..68172 | - | 78 | Protein_73 | DUF6404 family protein | - |
| KX927_RS01800 (KX927_01780) | 68212..69156 | - | 945 | Protein_74 | IS66 family transposase ISEc8 | Transposase |
| KX927_RS01805 (KX927_01785) | 69224..69439 | + | 216 | Protein_75 | IS3 family transposase IS911 | Transposase |
| KX927_RS01815 (KX927_01795) | 70690..71028 | - | 339 | WP_223648139.1 | hypothetical protein | - |
| KX927_RS01820 (KX927_01800) | 71031..71561 | - | 531 | WP_072664199.1 | hypothetical protein | - |
| KX927_RS01825 (KX927_01805) | 72587..73072 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| KX927_RS01830 (KX927_01810) | 73069..73791 | + | 723 | WP_000133023.1 | hypothetical protein | - |
| KX927_RS01835 (KX927_01815) | 73802..75433 | + | 1632 | WP_223648180.1 | hypothetical protein | Relaxase |
| KX927_RS01845 (KX927_01825) | 76758..77009 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| KX927_RS01850 (KX927_01830) | 77063..77368 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| KX927_RS01855 (KX927_01835) | 78402..79373 | - | 972 | WP_259559954.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KX927_RS01860 (KX927_01840) | 79373..80539 | - | 1167 | WP_063501643.1 | Sporulation initiation inhibitor protein Soj | VF |
| KX927_RS01865 (KX927_01845) | 81280..82290 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| KX927_RS01870 (KX927_01850) | 83139..83462 | + | 324 | Protein_88 | IS110 family transposase ISSm1 | Transposase |
| KX927_RS01875 (KX927_01855) | 83497..84297 | - | 801 | Protein_89 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| KX927_RS01880 (KX927_01860) | 84366..84623 | + | 258 | Protein_90 | IS3 family transposase ISEc52 | Transposase |
| KX927_RS01885 (KX927_01865) | 84636..84956 | - | 321 | Protein_91 | IS30 family transposase IS30D | Transposase |
| KX927_RS01890 (KX927_01870) | 84999..86534 | - | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| KX927_RS01895 (KX927_01875) | 86584..86931 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| KX927_RS01900 (KX927_01880) | 86928..87311 | - | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| KX927_RS01905 (KX927_01885) | 87396..88232 | - | 837 | Protein_95 | IS30 family transposase IS30D | Transposase |
| KX927_RS01910 | 88229..88309 | - | 81 | Protein_96 | hypothetical protein | - |
| KX927_RS01915 (KX927_01890) | 88297..88722 | + | 426 | Protein_97 | IS3 family transposase ISEc52 | Transposase |
| KX927_RS01920 | 89234..89356 | + | 123 | WP_001406634.1 | hypothetical protein | - |
| KX927_RS01925 (KX927_01895) | 89395..90903 | + | 1509 | WP_141223309.1 | group II intron reverse transcriptase/maturase | - |
| KX927_RS01930 (KX927_01900) | 90984..91473 | + | 490 | Protein_100 | IS3 family transposase | - |
| KX927_RS01935 (KX927_01905) | 91479..91688 | - | 210 | WP_072662162.1 | hypothetical protein | - |
| KX927_RS01940 (KX927_01910) | 92125..92349 | - | 225 | Protein_102 | hypothetical protein | - |
| KX927_RS01945 (KX927_01915) | 92632..92919 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KX927_RS01950 (KX927_01920) | 92919..93158 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KX927_RS01955 | 93183..93293 | + | 111 | Protein_105 | protein YdfV | - |
| KX927_RS01960 (KX927_01925) | 93500..93649 | + | 150 | WP_000550473.1 | hypothetical protein | - |
| KX927_RS01965 (KX927_01930) | 93693..94766 | + | 1074 | WP_000557466.1 | hypothetical protein | - |
| KX927_RS01970 (KX927_01935) | 94843..95547 | + | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| KX927_RS01975 (KX927_01940) | 95553..96077 | + | 525 | WP_232379235.1 | Ig-like domain-containing protein | - |
| KX927_RS01980 (KX927_01945) | 96420..97124 | - | 705 | WP_001067858.1 | IS66 family transposase ISEc23 | Transposase |
| KX927_RS01985 (KX927_01950) | 97188..97310 | + | 123 | Protein_111 | IS66 family transposase ISEc23 | Transposase |
| KX927_RS01990 (KX927_01955) | 97402..98183 | - | 782 | Protein_112 | IS21 family transposase IS100kyp | Transposase |
| KX927_RS01995 (KX927_01960) | 98180..98788 | - | 609 | Protein_113 | IS21 family transposase IS100kyp | Transposase |
| KX927_RS02000 (KX927_01965) | 98802..99174 | - | 373 | Protein_114 | IS1 family transposase | - |
| KX927_RS02010 (KX927_01975) | 100279..102384 | + | 2106 | WP_063501647.1 | UDP-forming cellulose synthase catalytic subunit | - |
| KX927_RS02015 (KX927_01980) | 102448..104598 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| KX927_RS02020 (KX927_01985) | 105345..105671 | + | 327 | WP_259559958.1 | hypothetical protein | - |
| KX927_RS02025 (KX927_01990) | 106006..106392 | + | 387 | Protein_119 | IS200-IS605 family transposase IS200C | Transposase |
| KX927_RS02030 | 106725..106877 | + | 153 | Protein_120 | endo-1,4-D-glucanase | - |
| KX927_RS02035 (KX927_01995) | 106859..110332 | + | 3474 | WP_104692566.1 | cellulose synthase complex outer membrane protein BcsC | - |
| KX927_RS02040 (KX927_02000) | 110523..111221 | - | 699 | Protein_122 | IS3 family transposase IS2 | Transposase |
| KX927_RS02045 (KX927_02005) | 111340..112074 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| KX927_RS02050 (KX927_02010) | 112183..112880 | + | 698 | WP_101780539.1 | IS1 family transposase | - |
| KX927_RS02055 (KX927_02015) | 113038..113910 | - | 873 | WP_105166189.1 | hypothetical protein | - |
| KX927_RS02060 (KX927_02020) | 114086..114250 | - | 165 | Protein_126 | XRE family transcriptional regulator | - |
| KX927_RS02065 (KX927_02030) | 114637..115334 | + | 698 | WP_227524632.1 | IS1 family transposase | - |
| KX927_RS02070 (KX927_02035) | 115521..116051 | + | 531 | WP_001352021.1 | hypothetical protein | - |
| KX927_RS02075 (KX927_02040) | 116054..116392 | + | 339 | WP_223656872.1 | hypothetical protein | - |
| KX927_RS02080 (KX927_02045) | 116735..116902 | - | 168 | Protein_130 | IS3 family transposase | - |
| KX927_RS02085 | 116901..116981 | + | 81 | Protein_131 | hypothetical protein | - |
| KX927_RS02090 (KX927_02050) | 117566..121063 | + | 3498 | WP_121863595.1 | Outer membrane protein IcsA autotransporter | VF |
| KX927_RS02095 (KX927_02055) | 121238..121443 | - | 206 | Protein_133 | hypothetical protein | - |
| KX927_RS02100 | 121442..121555 | + | 114 | Protein_134 | alkaline phosphatase | - |
| KX927_RS02105 (KX927_02065) | 121923..122210 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KX927_RS02110 (KX927_02070) | 122207..122458 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| KX927_RS02115 (KX927_02075) | 123041..127009 | + | 3969 | Protein_137 | helicase-related protein | - |
| KX927_RS02120 (KX927_02080) | 127043..127482 | + | 440 | Protein_138 | peptide-binding protein | - |
| KX927_RS02125 (KX927_02085) | 127479..127727 | + | 249 | WP_000747846.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|