MGE detailed information
MGE type: Genomic_island MGE length: 19387 bp
Accession: NZ_CP077969 Location: 234816..254202 Organism: Escherichia coli strain JM83 Replicon: chromosome
Accession: NZ_CP077969 Location: 234816..254202 Organism: Escherichia coli strain JM83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTJ86_RS01050 (229967) | 229967..230881 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| KTJ86_RS01055 (231122) | 231122..231922 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KTJ86_RS01060 (231953) | 231953..232549 | + | 597 | Protein_205 | methyltransferase domain-containing protein | - |
| KTJ86_RS01065 (232597) | 232597..233955 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KTJ86_RS01070 (234027) | 234027..234782 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KTJ86_RS01075 (234816) | 234816..235538 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KTJ86_RS01080 (235535) | 235535..236002 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| KTJ86_RS01085 (236067) | 236067..236798 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KTJ86_RS01095 (237335) | 237335..238120 | + | 786 | WP_001086141.1 | lipoprotein | - |
| KTJ86_RS01100 (238257) | 238257..238736 | - | 480 | WP_001236645.1 | protein YkfM | - |
| KTJ86_RS01105 (238746) | 238746..239102 | - | 357 | Protein_213 | hypothetical protein | - |
| KTJ86_RS01110 (239100) | 239100..239378 | + | 279 | Protein_214 | ISAs1 family transposase | - |
| KTJ86_RS01115 (239419) | 239419..240189 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KTJ86_RS01120 (240370) | 240370..240816 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KTJ86_RS01125 (240859) | 240859..243303 | - | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| KTJ86_RS01130 (243543) | 243543..244121 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| KTJ86_RS01135 (244327) | 244327..245094 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KTJ86_RS01140 (245065) | 245065..245805 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KTJ86_RS01145 (245961) | 245961..246239 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| KTJ86_RS01150 (246242) | 246242..246502 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| KTJ86_RS01155 (246712) | 246712..247461 | + | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| KTJ86_RS01160 (247637) | 247637..248134 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KTJ86_RS01165 (248358) | 248358..250070 | - | 1713 | Protein_225 | Flagellar biosynthesis protein FlhA | VF |
| KTJ86_RS01170 (250042) | 250042..250827 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| KTJ86_RS01175 (250898) | 250898..251953 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KTJ86_RS01180 (252005) | 252005..252298 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KTJ86_RS01185 (252301) | 252301..252699 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KTJ86_RS01190 (252709) | 252709..253161 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| KTJ86_RS01195 (253479) | 253479..253685 | + | 207 | Protein_231 | RtcB family protein | - |
| KTJ86_RS01200 (253681) | 253681..254202 | + | 522 | Protein_232 | peptide chain release factor H | - |
| KTJ86_RS01205 (254259) | 254259..255716 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| KTJ86_RS01215 (255977) | 255977..256831 | + | 855 | WP_085903674.1 | alpha/beta fold hydrolase | - |
| KTJ86_RS01220 (256841) | 256841..257650 | + | 810 | WP_000160710.1 | 2-keto-4-pentenoate hydratase | - |
| KTJ86_RS01225 (257647) | 257647..258597 | + | 951 | WP_000044314.1 | acetaldehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0 |