MGE detailed information
MGE type: Conjugative plasmid MGE length: 123770 bp
Accession: NZ_CP077333 Location: 1..123770 Organism: Lelliottia amnigena strain FDAARGOS 1446 Replicon: plasmid unnamed2
Accession: NZ_CP077333 Location: 1..123770 Organism: Lelliottia amnigena strain FDAARGOS 1446 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L76_RS22990 (I6L76_22990) | 541..1065 | + | 525 | WP_216981965.1 | conjugal transfer protein TraQ | - |
| I6L76_RS22995 (I6L76_22995) | 1107..1511 | + | 405 | WP_216981966.1 | conjugal transfer protein TraR | - |
| I6L76_RS23000 (I6L76_23000) | 1553..2419 | + | 867 | WP_254208130.1 | conjugal transfer protein TraT | - |
| I6L76_RS23005 (I6L76_23005) | 2500..5553 | + | 3054 | WP_216981967.1 | ATP-binding protein | - |
| I6L76_RS23010 (I6L76_23010) | 5553..6122 | + | 570 | WP_216981968.1 | conjugal transfer protein TraV | - |
| I6L76_RS23015 (I6L76_23015) | 6136..7338 | + | 1203 | WP_216981969.1 | conjugal transfer protein TraW | - |
| I6L76_RS23020 (I6L76_23020) | 7335..7877 | + | 543 | WP_216981970.1 | conjugal transfer protein TraX | - |
| I6L76_RS23025 (I6L76_23025) | 7935..10097 | + | 2163 | WP_216981971.1 | DotA/TraY family protein | - |
| I6L76_RS23030 (I6L76_23030) | 10157..10774 | + | 618 | WP_216981972.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| I6L76_RS23035 (I6L76_23035) | 11103..12308 | + | 1206 | WP_216981973.1 | conjugal transfer protein TrbA | - |
| I6L76_RS23040 (I6L76_23040) | 12359..13543 | + | 1185 | WP_216981974.1 | hypothetical protein | - |
| I6L76_RS23045 (I6L76_23045) | 13547..15673 | + | 2127 | Protein_12 | TraM recognition domain-containing protein | - |
| I6L76_RS23050 (I6L76_23050) | 15920..16189 | + | 270 | WP_216981976.1 | hypothetical protein | - |
| I6L76_RS23055 (I6L76_23055) | 16343..18964 | - | 2622 | Protein_14 | Protein TraI | Relaxase |
| I6L76_RS23060 (I6L76_23060) | 18986..19321 | - | 336 | WP_216981978.1 | plasmid mobilization protein MobA | - |
| I6L76_RS23065 (I6L76_23065) | 19565..19888 | + | 324 | WP_216981979.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| I6L76_RS23070 (I6L76_23070) | 19982..20815 | - | 834 | WP_216981980.1 | DUF932 domain-containing protein | - |
| I6L76_RS23075 (I6L76_23075) | 21223..21795 | - | 573 | WP_216981981.1 | DUF5983 family protein | - |
| I6L76_RS23080 (I6L76_23080) | 21848..22087 | - | 240 | WP_216981982.1 | hypothetical protein | - |
| I6L76_RS23085 (I6L76_23085) | 22427..22606 | + | 180 | WP_216981983.1 | hypothetical protein | - |
| I6L76_RS23090 (I6L76_23090) | 22839..23102 | + | 264 | WP_216981984.1 | XRE family transcriptional regulator | - |
| I6L76_RS23095 (I6L76_23095) | 23122..23952 | - | 831 | WP_216981985.1 | N-6 DNA methylase | - |
| I6L76_RS23100 (I6L76_23100) | 23992..24255 | - | 264 | WP_216981986.1 | hypothetical protein | - |
| I6L76_RS23105 (I6L76_23105) | 24342..24701 | - | 360 | WP_216981987.1 | hypothetical protein | - |
| I6L76_RS23110 (I6L76_23110) | 25672..25797 | - | 126 | WP_223540704.1 | type I toxin-antitoxin system Hok family toxin | - |
| I6L76_RS24130 | 25739..25888 | - | 150 | Protein_26 | FlmC family protein | - |
| I6L76_RS23115 (I6L76_23115) | 26079..26300 | - | 222 | WP_216981988.1 | hypothetical protein | - |
| I6L76_RS23120 (I6L76_23120) | 26297..27028 | - | 732 | WP_216981989.1 | plasmid SOS inhibition protein A | - |
| I6L76_RS23125 (I6L76_23125) | 27025..27450 | - | 426 | WP_216981990.1 | conjugation system SOS inhibitor PsiB | - |
| I6L76_RS23130 (I6L76_23130) | 27493..29499 | - | 2007 | WP_216981991.1 | ParB/RepB/Spo0J family partition protein | - |
| I6L76_RS23135 (I6L76_23135) | 29566..29823 | - | 258 | WP_216982007.1 | DUF905 family protein | - |
| I6L76_RS23140 (I6L76_23140) | 30180..30371 | - | 192 | WP_216981992.1 | hypothetical protein | - |
| I6L76_RS23145 (I6L76_23145) | 30508..30762 | - | 255 | WP_216981993.1 | DNA polymerase III subunit theta | - |
| I6L76_RS23150 (I6L76_23150) | 30923..31114 | - | 192 | WP_216981994.1 | hypothetical protein | - |
| I6L76_RS23155 (I6L76_23155) | 31157..31663 | - | 507 | WP_216982008.1 | antirestriction protein ArdA | - |
| I6L76_RS23160 (I6L76_23160) | 32049..32828 | - | 780 | WP_216981995.1 | hypothetical protein | - |
| I6L76_RS23165 (I6L76_23165) | 32827..33033 | + | 207 | WP_216981996.1 | hypothetical protein | - |
| I6L76_RS23170 (I6L76_23170) | 33330..33932 | + | 603 | WP_216981997.1 | hypothetical protein | - |
| I6L76_RS23175 (I6L76_23175) | 34104..34340 | + | 237 | WP_216981998.1 | hypothetical protein | - |
| I6L76_RS23180 (I6L76_23180) | 34580..34900 | + | 321 | WP_216981999.1 | hypothetical protein | - |
| I6L76_RS23185 (I6L76_23185) | 34992..35444 | - | 453 | WP_216982000.1 | hypothetical protein | - |
| I6L76_RS23190 (I6L76_23190) | 35502..36272 | - | 771 | WP_216982001.1 | hypothetical protein | - |
| I6L76_RS23195 (I6L76_23195) | 36633..36842 | + | 210 | WP_216982002.1 | hypothetical protein | - |
| I6L76_RS23200 (I6L76_23200) | 36959..37231 | + | 273 | WP_216982003.1 | hypothetical protein | - |
| I6L76_RS23205 (I6L76_23205) | 37754..38182 | + | 429 | WP_216982004.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I6L76_RS23210 (I6L76_23210) | 38182..39450 | + | 1269 | WP_216982009.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I6L76_RS23215 (I6L76_23215) | 39454..39783 | - | 330 | WP_244911524.1 | plasmid partitioning/stability family protein | - |
| I6L76_RS23220 (I6L76_23220) | 39848..40819 | - | 972 | WP_111969895.1 | plasmid segregation protein ParM | - |
| I6L76_RS23225 (I6L76_23225) | 41049..41684 | + | 636 | WP_111969896.1 | AAA family ATPase | - |
| I6L76_RS23230 (I6L76_23230) | 41686..41979 | + | 294 | WP_111969897.1 | hypothetical protein | - |
| I6L76_RS23235 (I6L76_23235) | 42134..42913 | - | 780 | WP_111969898.1 | site-specific integrase | - |
| I6L76_RS23240 (I6L76_23240) | 42910..43731 | - | 822 | WP_111969899.1 | hypothetical protein | - |
| I6L76_RS23245 (I6L76_23245) | 44660..45586 | + | 927 | WP_111969900.1 | hypothetical protein | - |
| I6L76_RS23250 (I6L76_23250) | 45631..45885 | + | 255 | WP_111969901.1 | hypothetical protein | - |
| I6L76_RS23255 (I6L76_23255) | 46382..46726 | + | 345 | WP_111969902.1 | abortive infection protein | - |
| I6L76_RS23260 (I6L76_23260) | 46825..47568 | - | 744 | WP_254208131.1 | DUF4145 domain-containing protein | - |
| I6L76_RS23265 (I6L76_23265) | 47898..48161 | + | 264 | WP_063417415.1 | hypothetical protein | - |
| I6L76_RS23270 (I6L76_23270) | 48158..49375 | + | 1218 | WP_063417414.1 | hypothetical protein | - |
| I6L76_RS23275 (I6L76_23275) | 49736..50293 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| I6L76_RS23280 (I6L76_23280) | 50287..50658 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| I6L76_RS23285 (I6L76_23285) | 50655..51155 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| I6L76_RS23290 (I6L76_23290) | 51152..51478 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| I6L76_RS23295 (I6L76_23295) | 51733..52089 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| I6L76_RS23300 (I6L76_23300) | 52079..52480 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| I6L76_RS23305 (I6L76_23305) | 52477..52767 | - | 291 | WP_216982005.1 | nucleotidyltransferase family protein | - |
| I6L76_RS23310 (I6L76_23310) | 52926..55892 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| I6L76_RS23315 (I6L76_23315) | 55990..56280 | + | 291 | WP_254208132.1 | hypothetical protein | - |
| I6L76_RS23320 (I6L76_23320) | 56277..56756 | + | 480 | WP_216982006.1 | thermonuclease family protein | - |
| I6L76_RS23325 (I6L76_23325) | 57041..58294 | - | 1254 | WP_009238019.1 | MgtC/SapB family protein | - |
| I6L76_RS23330 (I6L76_23330) | 58482..58748 | + | 267 | WP_009277699.1 | hypothetical protein | - |
| I6L76_RS23335 (I6L76_23335) | 59117..59653 | - | 537 | WP_153336992.1 | transposase | - |
| I6L76_RS23340 (I6L76_23340) | 59711..60046 | - | 336 | WP_066690341.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| I6L76_RS23345 (I6L76_23345) | 60027..60404 | - | 378 | WP_153336993.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6L76_RS23350 (I6L76_23350) | 60596..61179 | + | 584 | Protein_74 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| I6L76_RS23355 (I6L76_23355) | 61176..64208 | + | 3033 | WP_216981927.1 | Tn3 family transposase ISPsy42 | Transposase |
| I6L76_RS23360 (I6L76_23360) | 64457..65413 | + | 957 | WP_039899550.1 | replication initiation protein | - |
| I6L76_RS23365 (I6L76_23365) | 65421..65870 | + | 450 | WP_016517644.1 | hypothetical protein | - |
| I6L76_RS23370 (I6L76_23370) | 66117..66434 | + | 318 | WP_040113353.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6L76_RS23375 (I6L76_23375) | 66427..66714 | + | 288 | WP_172691904.1 | helix-turn-helix transcriptional regulator | - |
| I6L76_RS23380 (I6L76_23380) | 67052..68677 | - | 1626 | WP_011638903.1 | Phosphoethanolamine transferase EptA | VF |
| I6L76_RS24135 | 68851..69021 | - | 171 | Protein_81 | recombinase family protein | - |
| I6L76_RS23385 (I6L76_23385) | 69083..69787 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6L76_RS23390 (I6L76_23390) | 69840..70670 | - | 831 | Protein_83 | IS66 family transposase ISSgsp1 | Transposase |
| I6L76_RS23395 (I6L76_23395) | 70720..71067 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| I6L76_RS23405 (I6L76_23405) | 71532..72446 | - | 915 | Protein_85 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| I6L76_RS23410 (I6L76_23410) | 72442..72687 | + | 246 | Protein_86 | DUF3363 domain-containing protein | - |
| I6L76_RS23415 (I6L76_23415) | 73185..74423 | + | 1239 | WP_040113345.1 | TolC family protein | - |
| I6L76_RS23420 (I6L76_23420) | 74434..75642 | + | 1209 | WP_040113352.1 | Nickel and cobalt resistance protein CnrB | VF |
| I6L76_RS23425 (I6L76_23425) | 75653..78877 | + | 3225 | WP_040126190.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| I6L76_RS23430 (I6L76_23430) | 78874..79305 | + | 432 | WP_071882941.1 | GtrA family protein | - |
| I6L76_RS23435 (I6L76_23435) | 79350..79919 | + | 570 | Protein_91 | putative glycosyltransferase | VF |
| I6L76_RS23440 (I6L76_23440) | 80219..80803 | - | 585 | WP_040113348.1 | mobilization protein MobX | - |
| I6L76_RS23445 (I6L76_23445) | 80816..81913 | - | 1098 | WP_040113349.1 | Mobilization protein A | Relaxase |
| I6L76_RS23450 (I6L76_23450) | 82079..82546 | + | 468 | WP_064645523.1 | conjugal transfer protein TraD | - |
| I6L76_RS23455 (I6L76_23455) | 83439..84692 | - | 1254 | WP_009238019.1 | MgtC/SapB family protein | - |
| I6L76_RS23460 (I6L76_23460) | 84880..85146 | + | 267 | WP_009277699.1 | hypothetical protein | - |
| I6L76_RS23465 (I6L76_23465) | 85515..86051 | - | 537 | WP_153336992.1 | transposase | - |
| I6L76_RS23470 (I6L76_23470) | 86109..86444 | - | 336 | WP_066690341.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| I6L76_RS23475 (I6L76_23475) | 86425..86802 | - | 378 | WP_153336993.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6L76_RS23480 (I6L76_23480) | 86994..87577 | + | 584 | Protein_100 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| I6L76_RS23485 (I6L76_23485) | 87574..90606 | + | 3033 | WP_216981927.1 | Tn3 family transposase ISPsy42 | Transposase |
| I6L76_RS23490 (I6L76_23490) | 92563..93426 | - | 864 | WP_216981939.1 | incFII family plasmid replication initiator RepA | - |
| I6L76_RS23505 (I6L76_23505) | 94202..94864 | + | 663 | WP_216981941.1 | PAS domain-containing protein | - |
| I6L76_RS23510 (I6L76_23510) | 95311..95571 | + | 261 | WP_216981942.1 | sigma-70 family RNA polymerase sigma factor | - |
| I6L76_RS23515 (I6L76_23515) | 95858..96367 | + | 510 | WP_216981943.1 | transcription termination/antitermination NusG family protein | - |
| I6L76_RS23520 (I6L76_23520) | 96609..97280 | + | 672 | WP_216981944.1 | hypothetical protein | - |
| I6L76_RS23525 (I6L76_23525) | 97303..97809 | + | 507 | WP_216981945.1 | hypothetical protein | - |
| I6L76_RS23530 (I6L76_23530) | 97825..98943 | + | 1119 | WP_216981946.1 | hypothetical protein | VF |
| I6L76_RS23535 (I6L76_23535) | 98943..99380 | + | 438 | WP_216981947.1 | hypothetical protein | VF |
| I6L76_RS23540 (I6L76_23540) | 99395..101077 | + | 1683 | WP_216981948.1 | Outer membrane lipoprotein BfpB | VF |
| I6L76_RS23545 (I6L76_23545) | 101079..102386 | + | 1308 | WP_216981949.1 | type 4b pilus protein PilO2 | - |
| I6L76_RS23550 (I6L76_23550) | 102370..102861 | + | 492 | WP_254208125.1 | hypothetical protein | VF |
| I6L76_RS23555 (I6L76_23555) | 102864..104423 | + | 1560 | WP_111969814.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| I6L76_RS23560 (I6L76_23560) | 104416..105510 | + | 1095 | WP_111969813.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| I6L76_RS23565 (I6L76_23565) | 105524..106138 | + | 615 | WP_216981950.1 | hypothetical protein | VF |
| I6L76_RS23570 (I6L76_23570) | 106184..106705 | + | 522 | WP_216981951.1 | hypothetical protein | VF |
| I6L76_RS23575 (I6L76_23575) | 106690..107364 | + | 675 | WP_216981952.1 | hypothetical protein | VF |
| I6L76_RS23580 (I6L76_23580) | 107361..108602 | + | 1242 | WP_216981953.1 | hypothetical protein | VF |
| I6L76_RS23585 (I6L76_23585) | 109247..110401 | + | 1155 | WP_216981954.1 | site-specific integrase | - |
| I6L76_RS23590 (I6L76_23590) | 110426..110956 | + | 531 | WP_216981955.1 | hypothetical protein | - |
| I6L76_RS23595 (I6L76_23595) | 111049..111885 | + | 837 | WP_216981956.1 | hypothetical protein | - |
| I6L76_RS23600 (I6L76_23600) | 111988..113193 | + | 1206 | WP_254208126.1 | conjugal transfer protein TraF | - |
| I6L76_RS23605 (I6L76_23605) | 113357..113836 | + | 480 | WP_216981957.1 | hypothetical protein | VF |
| I6L76_RS23610 (I6L76_23610) | 113833..114639 | + | 807 | WP_216981958.1 | hypothetical protein | VF |
| I6L76_RS23615 (I6L76_23615) | 114653..115813 | + | 1161 | WP_254208127.1 | putative protein YggR | VF |
| I6L76_RS23620 (I6L76_23620) | 115810..116097 | + | 288 | WP_216981959.1 | IcmT/TraK family protein | - |
| I6L76_RS23625 (I6L76_23625) | 116726..120166 | + | 3441 | WP_216981960.1 | DUF5710 domain-containing protein | - |
| I6L76_RS23630 (I6L76_23630) | 120184..120534 | + | 351 | WP_254208128.1 | conjugal transfer protein | - |
| I6L76_RS23635 (I6L76_23635) | 120624..121241 | + | 618 | WP_254208129.1 | hypothetical protein | VF |
| I6L76_RS23640 (I6L76_23640) | 121252..122235 | + | 984 | WP_216981962.1 | hypothetical protein | VF |
| I6L76_RS23645 (I6L76_23645) | 122235..123551 | + | 1317 | WP_216981963.1 | conjugal transfer protein TraO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|