MGE detailed information
MGE type: Genomic_island MGE length: 20241 bp
Accession: NZ_CP077091 Location: 3714324..3734564 Organism: Pseudomonas hamedanensis strain SWRI65 Replicon: chromosome
Accession: NZ_CP077091 Location: 3714324..3734564 Organism: Pseudomonas hamedanensis strain SWRI65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU739_RS15995 (HU739_015995) | 3709504..3710571 | + | 1068 | WP_186548447.1 | A/G-specific adenine glycosylase | - |
| HU739_RS16000 (HU739_016000) | 3710568..3710840 | + | 273 | WP_186548449.1 | oxidative damage protection protein | - |
| HU739_RS16010 (HU739_016010) | 3711103..3711450 | + | 348 | WP_186548451.1 | hypothetical protein | - |
| HU739_RS16015 (HU739_016015) | 3711463..3711753 | - | 291 | WP_186548453.1 | YceK/YidQ family lipoprotein | - |
| HU739_RS16020 (HU739_016020) | 3711847..3712053 | - | 207 | WP_186548455.1 | hypothetical protein | - |
| HU739_RS16025 (HU739_016025) | 3712086..3713027 | + | 942 | WP_186548457.1 | alpha/beta fold hydrolase | - |
| HU739_RS16030 (HU739_016030) | 3713057..3713470 | + | 414 | WP_186548459.1 | hypothetical protein | - |
| HU739_RS16035 (HU739_016035) | 3713477..3713929 | + | 453 | WP_186548461.1 | hypothetical protein | - |
| HU739_RS16040 (HU739_016040) | 3714094..3714324 | + | 231 | WP_039756568.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| HU739_RS16045 (HU739_016045) | 3714324..3714731 | + | 408 | WP_186548463.1 | tRNA(fMet)-specific endonuclease VapC | - |
| HU739_RS16050 (HU739_016050) | 3714802..3716193 | - | 1392 | WP_186548465.1 | GABA permease | - |
| HU739_RS16055 (HU739_016055) | 3716748..3717521 | + | 774 | WP_025110949.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HU739_RS16060 (HU739_016060) | 3717535..3718284 | + | 750 | WP_186548467.1 | ABC transporter substrate-binding protein | - |
| HU739_RS16065 (HU739_016065) | 3718363..3719058 | + | 696 | WP_186548469.1 | ABC transporter permease | - |
| HU739_RS16070 (HU739_016070) | 3719055..3719744 | + | 690 | WP_186548471.1 | ABC transporter permease | - |
| HU739_RS16075 (HU739_016075) | 3719725..3720960 | + | 1236 | WP_186548699.1 | methyltransferase | - |
| HU739_RS16080 (HU739_016080) | 3721305..3722141 | + | 837 | WP_186548473.1 | FkbM family methyltransferase | - |
| HU739_RS16090 (HU739_016090) | 3722465..3723784 | + | 1320 | WP_186548475.1 | hypothetical protein ; Integrase | Integrase |
| HU739_RS16095 (HU739_016095) | 3723816..3724163 | - | 348 | WP_186548477.1 | hypothetical protein | - |
| HU739_RS16100 (HU739_016100) | 3725275..3726255 | + | 981 | WP_017478148.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HU739_RS26780 | 3726252..3726527 | + | 276 | WP_122814965.1 | hypothetical protein | - |
| HU739_RS16105 (HU739_016105) | 3726524..3726883 | + | 360 | WP_124372913.1 | hypothetical protein | - |
| HU739_RS16110 (HU739_016110) | 3727000..3728925 | - | 1926 | WP_186548479.1 | ATP-dependent helicase | - |
| HU739_RS16115 (HU739_016115) | 3728910..3731048 | - | 2139 | WP_186548481.1 | ATP-dependent endonuclease | - |
| HU739_RS16120 (HU739_016120) | 3731773..3732273 | - | 501 | WP_225922739.1 | transcriptional regulator | Antitoxin Detail |
| HU739_RS16125 (HU739_016125) | 3732299..3732652 | - | 354 | WP_186548483.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| HU739_RS16130 (HU739_016130) | 3733173..3733598 | - | 426 | WP_186548485.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HU739_RS16135 (HU739_016135) | 3733630..3733812 | - | 183 | WP_186548487.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HU739_RS16140 (HU739_016140) | 3734283..3734564 | + | 282 | WP_186548489.1 | DUF3077 domain-containing protein | - |
| HU739_RS16145 (HU739_016145) | 3734609..3735289 | - | 681 | WP_225922740.1 | RES family NAD+ phosphorylase | - |
| HU739_RS16150 (HU739_016150) | 3735286..3735693 | - | 408 | WP_186548491.1 | MbcA/ParS/Xre antitoxin family protein | - |
| HU739_RS16155 (HU739_016155) | 3736014..3736940 | + | 927 | WP_186548493.1 | LysR family transcriptional regulator | - |
| HU739_RS16160 (HU739_016160) | 3736857..3737174 | - | 318 | WP_024011198.1 | AzlD domain-containing protein | - |
| HU739_RS16165 (HU739_016165) | 3737153..3737869 | - | 717 | WP_186548495.1 | AzlC family ABC transporter permease | - |
| HU739_RS16170 (HU739_016170) | 3737866..3738243 | - | 378 | WP_186548705.1 | GNAT family N-acetyltransferase | - |
| HU739_RS16175 (HU739_016175) | 3738323..3739069 | - | 747 | WP_186548497.1 | 2OG-Fe dioxygenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|