MGE detailed information
MGE type: Conjugative plasmid MGE length: 66958 bp
Accession: NZ_CP076712 Location: 1..66958 Organism: Escherichia coli O158:H23 strain CFIAFB20140388 Replicon: plasmid unnamed3
Accession: NZ_CP076712 Location: 1..66958 Organism: Escherichia coli O158:H23 strain CFIAFB20140388 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ220_RS24785 (1) | 1..858 | + | 858 | WP_216781592.1 | incFII family plasmid replication initiator RepA | - |
| KQ220_RS25495 (1770) | 1770..1907 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| KQ220_RS24790 (1927) | 1927..2190 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| KQ220_RS24795 (2180) | 2180..2479 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KQ220_RS24800 (2704) | 2704..3351 | - | 648 | WP_021515401.1 | hypothetical protein | - |
| KQ220_RS24805 (3549) | 3549..3728 | + | 180 | Protein_5 | entry exclusion protein 1 | - |
| KQ220_RS24810 (3809) | 3809..4237 | + | 429 | WP_021515400.1 | Exc2 family lipoprotein | - |
| KQ220_RS24815 (4585) | 4585..4728 | - | 144 | WP_001560790.1 | colicin release lysis protein | - |
| KQ220_RS24820 (4790) | 4790..5050 | - | 261 | WP_000420692.1 | bacteriocin immunity protein | - |
| KQ220_RS25500 (5053) | 5053..5235 | - | 183 | Protein_9 | HNH endonuclease signature motif containing protein | - |
| KQ220_RS24825 (5523) | 5523..5726 | - | 204 | Protein_10 | hypothetical protein | - |
| KQ220_RS24830 (6180) | 6180..6827 | - | 648 | WP_216781593.1 | hypothetical protein | - |
| KQ220_RS24835 (7110) | 7110..7460 | - | 351 | WP_000361383.1 | plasmid partitioning/stability family protein | - |
| KQ220_RS24840 (7463) | 7463..8425 | - | 963 | WP_000959876.1 | plasmid segregation protein ParM | - |
| KQ220_RS25505 (8572) | 8572..8865 | + | 294 | WP_225932717.1 | hypothetical protein | - |
| KQ220_RS24845 (8975) | 8975..9877 | + | 903 | WP_216781605.1 | DUF1281 domain-containing protein | - |
| KQ220_RS24850 (9874) | 9874..10185 | + | 312 | WP_216781594.1 | hypothetical protein | - |
| KQ220_RS24855 (10262) | 10262..10945 | + | 684 | WP_000085940.1 | DNA methylase | - |
| KQ220_RS24860 (10946) | 10946..11167 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| KQ220_RS24865 (11097) | 11097..11615 | + | 519 | WP_225932718.1 | DUF1380 family protein | - |
| KQ220_RS24870 (11660) | 11660..12430 | + | 771 | WP_216781596.1 | hypothetical protein | - |
| KQ220_RS24875 (12844) | 12844..13269 | + | 426 | WP_225932713.1 | antirestriction protein | - |
| KQ220_RS24880 (13316) | 13316..13738 | + | 423 | WP_059320896.1 | DUF1380 family protein | - |
| KQ220_RS24885 (13735) | 13735..13926 | + | 192 | WP_216781597.1 | hypothetical protein | - |
| KQ220_RS24890 (14906) | 14906..15136 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| KQ220_RS24895 (15188) | 15188..16549 | + | 1362 | WP_216781598.1 | DUF3560 domain-containing protein | - |
| KQ220_RS24900 (16596) | 16596..17159 | + | 564 | WP_059320955.1 | class I SAM-dependent methyltransferase | - |
| KQ220_RS25510 (17140) | 17140..17689 | - | 550 | Protein_27 | hypothetical protein | - |
| KQ220_RS24905 (17759) | 17759..17965 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| KQ220_RS24910 (17991) | 17991..18518 | + | 528 | WP_000290820.1 | single-stranded DNA-binding protein | - |
| KQ220_RS24915 (18576) | 18576..18809 | + | 234 | WP_000006001.1 | DUF905 family protein | - |
| KQ220_RS24920 (18950) | 18950..19387 | + | 438 | Protein_31 | hypothetical protein | - |
| KQ220_RS24925 (19442) | 19442..19876 | + | 435 | WP_059320953.1 | conjugation system SOS inhibitor PsiB | - |
| KQ220_RS24930 (19873) | 19873..20614 | + | 742 | Protein_33 | plasmid SOS inhibition protein A | - |
| - (20604) | 20604..20816 | + | 213 | NuclAT_0 | - | Antitoxin Detail |
| - (20604) | 20604..20816 | + | 213 | NuclAT_0 | - | Antitoxin Detail |
| - (20604) | 20604..20816 | + | 213 | NuclAT_0 | - | Antitoxin Detail |
| - (20604) | 20604..20816 | + | 213 | NuclAT_0 | - | Antitoxin Detail |
| KQ220_RS25515 (20804) | 20804..20956 | + | 153 | Protein_34 | DUF5431 family protein | - |
| KQ220_RS24935 (20901) | 20901..21023 | + | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| KQ220_RS24940 (21262) | 21262..21622 | - | 361 | Protein_36 | hypothetical protein | - |
| KQ220_RS24945 (21692) | 21692..21898 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| KQ220_RS24950 (21922) | 21922..22224 | + | 303 | WP_001272235.1 | hypothetical protein | - |
| KQ220_RS24955 (22380) | 22380..22667 | + | 288 | WP_000107538.1 | hypothetical protein | - |
| KQ220_RS24960 (22785) | 22785..23606 | + | 822 | Protein_40 | DUF932 domain-containing protein | - |
| KQ220_RS24965 (23903) | 23903..24505 | - | 603 | WP_225932714.1 | hypothetical protein | VF |
| KQ220_RS24970 (24826) | 24826..25209 | + | 384 | WP_001151537.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KQ220_RS24975 (25396) | 25396..26085 | + | 690 | WP_059320948.1 | conjugal transfer transcriptional regulator TraJ | - |
| KQ220_RS24980 (26178) | 26178..26561 | + | 384 | WP_225932715.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| KQ220_RS24985 (26613) | 26613..26972 | + | 360 | WP_059320947.1 | type IV conjugative transfer system pilin TraA | - |
| KQ220_RS24990 (26987) | 26987..27298 | + | 312 | WP_000012118.1 | type IV conjugative transfer system protein TraL | - |
| KQ220_RS24995 (27320) | 27320..27886 | + | 567 | WP_097336691.1 | type IV conjugative transfer system protein TraE | - |
| KQ220_RS25000 (27873) | 27873..28601 | + | 729 | WP_225932716.1 | type-F conjugative transfer system secretin TraK | - |
| KQ220_RS25005 (28601) | 28601..30052 | + | 1452 | WP_059320944.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KQ220_RS25010 (30042) | 30042..30605 | + | 564 | WP_059320943.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KQ220_RS25015 (30592) | 30592..30912 | + | 321 | WP_229380345.1 | conjugal transfer protein TrbD | - |
| KQ220_RS25020 (30905) | 30905..31156 | + | 252 | WP_216781602.1 | conjugal transfer protein TrbG | - |
| KQ220_RS25025 (31153) | 31153..31668 | + | 516 | WP_216781603.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KQ220_RS25030 (31803) | 31803..32024 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| KQ220_RS25035 (32017) | 32017..32430 | + | 414 | WP_059320939.1 | hypothetical protein | - |
| KQ220_RS25040 (32423) | 32423..32896 | + | 474 | WP_059320962.1 | hypothetical protein | - |
| KQ220_RS25045 (32976) | 32976..33194 | + | 219 | WP_059320938.1 | hypothetical protein | - |
| KQ220_RS25050 (33191) | 33191..33595 | + | 405 | WP_059320937.1 | hypothetical protein | - |
| KQ220_RS25055 (33592) | 33592..33954 | + | 363 | WP_216781581.1 | hypothetical protein | - |
| KQ220_RS25060 (34080) | 34080..36710 | + | 2631 | WP_059320935.1 | type IV secretion system protein TraC | - |
| KQ220_RS25065 (36707) | 36707..37093 | + | 387 | WP_033552954.1 | type-F conjugative transfer system protein TrbI | - |
| KQ220_RS25070 (37090) | 37090..37722 | + | 633 | WP_033552956.1 | type-F conjugative transfer system protein TraW | - |
| KQ220_RS25075 (37719) | 37719..38711 | + | 993 | WP_059320933.1 | conjugal transfer pilus assembly protein TraU | - |
| KQ220_RS25520 (39151) | 39151..39426 | + | 276 | Protein_64 | hypothetical protein | - |
| KQ220_RS25085 (39957) | 39957..40595 | + | 639 | WP_216781582.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KQ220_RS25090 (40592) | 40592..40963 | + | 372 | WP_072245100.1 | hypothetical protein | - |
| KQ220_RS25095 (40988) | 40988..41410 | + | 423 | WP_059320930.1 | HNH endonuclease signature motif containing protein | - |
| KQ220_RS25100 (41407) | 41407..43257 | + | 1851 | WP_216781584.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KQ220_RS25105 (43284) | 43284..43541 | + | 258 | WP_059320928.1 | conjugal transfer protein TrbE | - |
| KQ220_RS25110 (43534) | 43534..44277 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KQ220_RS25115 (44293) | 44293..44649 | + | 357 | WP_059320927.1 | conjugal transfer protein TrbA | - |
| KQ220_RS25120 (45083) | 45083..46228 | - | 1146 | WP_059320926.1 | hypothetical protein | - |
| KQ220_RS25125 (46285) | 46285..46566 | + | 282 | WP_059320925.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KQ220_RS25130 (46553) | 46553..47098 | + | 546 | WP_059320924.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KQ220_RS25135 (47028) | 47028..47369 | + | 342 | WP_072245095.1 | P-type conjugative transfer protein TrbJ | - |
| KQ220_RS25140 (47356) | 47356..47748 | + | 393 | WP_229380346.1 | F-type conjugal transfer protein TrbF | - |
| KQ220_RS25145 (47735) | 47735..49108 | + | 1374 | WP_059320960.1 | conjugal transfer pilus assembly protein TraH | - |
| KQ220_RS25150 (49105) | 49105..51948 | + | 2844 | WP_216781587.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KQ220_RS25155 (51970) | 51970..52449 | + | 480 | WP_059320959.1 | surface exclusion protein | - |
| KQ220_RS25160 (52498) | 52498..53229 | + | 732 | WP_059320920.1 | conjugal transfer complement resistance protein TraT | - |
| KQ220_RS25165 (53432) | 53432..54169 | + | 738 | WP_059320919.1 | hypothetical protein | - |
| KQ220_RS25170 (54220) | 54220..56409 | + | 2190 | WP_216781588.1 | type IV conjugative transfer system coupling protein TraD | - |
| KQ220_RS25175 (56418) | 56418..56816 | - | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KQ220_RS25180 (56816) | 56816..57043 | - | 228 | WP_059320917.1 | toxin-antitoxin system antitoxin VapB | - |
| KQ220_RS25185 (57125) | 57125..62395 | + | 5271 | WP_216781589.1 | Multifunctional conjugation protein TraI | Relaxase |
| KQ220_RS25190 (62415) | 62415..63155 | + | 741 | WP_096924311.1 | conjugal transfer pilus acetylase TraX | - |
| KQ220_RS25195 (63210) | 63210..63770 | + | 561 | WP_216781590.1 | fertility inhibition protein FinO | - |
| KQ220_RS25200 (63906) | 63906..64118 | + | 213 | WP_097336712.1 | hypothetical protein | - |
| KQ220_RS25205 (64357) | 64357..64818 | + | 462 | WP_216781591.1 | thermonuclease family protein | - |
| KQ220_RS25210 (64887) | 64887..65072 | + | 186 | WP_096924325.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| KQ220_RS25215 (65111) | 65111..65690 | + | 580 | Protein_91 | DUF2726 domain-containing protein | - |
| - (65865) | 65865..65926 | - | 62 | NuclAT_1 | - | - |
| - (65865) | 65865..65926 | - | 62 | NuclAT_1 | - | - |
| - (65865) | 65865..65926 | - | 62 | NuclAT_1 | - | - |
| - (65865) | 65865..65926 | - | 62 | NuclAT_1 | - | - |
| KQ220_RS25220 (65970) | 65970..66119 | + | 150 | WP_097336728.1 | Hok/Gef family protein | - |
| KQ220_RS25225 (66403) | 66403..66645 | + | 243 | WP_096924316.1 | replication regulatory protein RepA | - |
| KQ220_RS25560 (66761) | 66761..66946 | + | 186 | Protein_94 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|