MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP076470 Location: 2963670..2995550 Organism: Escherichia coli strain DH5a Replicon: chromosome
Accession: NZ_CP076470 Location: 2963670..2995550 Organism: Escherichia coli strain DH5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KN807_RS14275 (2959854) | 2959854..2961122 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| KN807_RS14280 (2961142) | 2961142..2962119 | - | 978 | WP_033801603.1 | glutarate dioxygenase GlaH | - |
| KN807_RS14285 (2962455) | 2962455..2964707 | - | 2253 | Protein_2786 | alpha-amylase family glycosyl hydrolase | - |
| KN807_RS14295 (2966093) | 2966093..2967466 | + | 1374 | Protein_2787 | DUF5507 domain-containing protein | - |
| KN807_RS22420 (2967860) | 2967860..2968039 | + | 180 | WP_087676347.1 | DNA invertase | - |
| KN807_RS14305 (2968194) | 2968194..2968313 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| KN807_RS14310 (2968378) | 2968378..2972958 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| KN807_RS14315 (2973322) | 2973322..2973651 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| KN807_RS14320 (2973672) | 2973672..2973989 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KN807_RS14325 (2974027) | 2974027..2974227 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| KN807_RS14330 (2974236) | 2974236..2974718 | - | 483 | WP_001407480.1 | RadC family protein | - |
| KN807_RS14335 (2974727) | 2974727..2975185 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| KN807_RS14340 (2975288) | 2975288..2975472 | - | 185 | Protein_2796 | DUF905 family protein | - |
| KN807_RS14345 (2976083) | 2976083..2977786 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| KN807_RS14350 (2977928) | 2977928..2978937 | + | 1010 | Protein_2798 | arsenic transporter | - |
| KN807_RS14355 (2978950) | 2978950..2979102 | + | 153 | Protein_2799 | arsenate reductase | - |
| KN807_RS14360 (2979489) | 2979489..2979956 | - | 468 | WP_000702495.1 | protein YfjT | - |
| KN807_RS14365 (2979980) | 2979980..2980423 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| KN807_RS14370 (2980423) | 2980423..2980659 | - | 237 | WP_001144029.1 | protein YpjK | - |
| KN807_RS14375 (2980700) | 2980700..2981401 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| KN807_RS14380 (2981618) | 2981618..2982439 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| KN807_RS14385 (2982531) | 2982531..2983394 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| KN807_RS14390 (2983749) | 2983749..2984120 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| KN807_RS14395 (2984113) | 2984113..2985186 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| KN807_RS14400 (2985328) | 2985328..2985591 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| KN807_RS14405 (2985951) | 2985951..2987567 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| KN807_RS14410 (2987564) | 2987564..2989753 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| KN807_RS14415 (2989931) | 2989931..2990557 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| KN807_RS14420 (2990710) | 2990710..2992119 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| KN807_RS14425 (2992248) | 2992248..2992460 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| KN807_RS14430 (2992504) | 2992504..2993460 | + | 957 | WP_000510827.1 | protein YfjH | - |
| KN807_RS14435 (2993704) | 2993704..2994945 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| KN807_RS14445 (2995726) | 2995726..2996208 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| KN807_RS14450 (2996379) | 2996379..2996816 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| KN807_RS14455 (2996806) | 2996806..2997096 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| KN807_RS14460 (2997158) | 2997158..2997499 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| KN807_RS14465 (2997648) | 2997648..2999309 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| KN807_RS14470 (2999395) | 2999395..3000273 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |