MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP076404 Location: 1588934..1610640 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Accession: NZ_CP076404 Location: 1588934..1610640 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJY95_RS07675 (1585449) | 1585449..1586195 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| KJY95_RS07680 (1586284) | 1586284..1586970 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KJY95_RS07685 (1587147) | 1587147..1587350 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KJY95_RS07690 (1587385) | 1587385..1588845 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| KJY95_RS07695 (1588934) | 1588934..1590301 | - | 1368 | Protein_1505 | MHS family MFS transporter | - |
| KJY95_RS07700 (1590822) | 1590822..1590935 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KJY95_RS07705 (1591004) | 1591004..1591237 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KJY95_RS07710 (1591554) | 1591554..1592144 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KJY95_RS07715 (1592242) | 1592242..1592817 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KJY95_RS07720 (1592817) | 1592817..1593779 | - | 963 | WP_001027733.1 | phage tail protein | - |
| KJY95_RS07725 (1593730) | 1593730..1594299 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| KJY95_RS07730 (1594688) | 1594688..1594921 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KJY95_RS07735 (1594979) | 1594979..1595389 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KJY95_RS07740 (1595541) | 1595541..1595714 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KJY95_RS07745 (1595886) | 1595886..1596041 | - | 156 | WP_001309517.1 | protein YnfN | - |
| KJY95_RS07750 (1596120) | 1596120..1596185 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| KJY95_RS07755 (1596188) | 1596188..1596376 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| KJY95_RS07760 (1596387) | 1596387..1596599 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KJY95_RS07765 (1596962) | 1596962..1597459 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KJY95_RS07770 (1597456) | 1597456..1597989 | - | 534 | WP_001092971.1 | lysozyme | - |
| KJY95_RS07775 (1597986) | 1597986..1598297 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| KJY95_RS07780 (1598302) | 1598302..1598517 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KJY95_RS07785 (1598737) | 1598737..1598907 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KJY95_RS07790 (1599271) | 1599271..1599486 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KJY95_RS07795 (1599787) | 1599787..1599999 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KJY95_RS07800 (1600054) | 1600054..1600143 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| KJY95_RS07805 (1600421) | 1600421..1601173 | - | 753 | WP_001047135.1 | antitermination protein | - |
| KJY95_RS07810 (1601187) | 1601187..1602236 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KJY95_RS07815 (1602238) | 1602238..1602516 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| KJY95_RS07820 (1602583) | 1602583..1602834 | - | 252 | WP_000980994.1 | protein Rem | - |
| KJY95_RS07825 (1603051) | 1603051..1603206 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KJY95_RS07830 (1603278) | 1603278..1603565 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KJY95_RS07835 (1603565) | 1603565..1603804 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KJY95_RS07840 (1603829) | 1603829..1604134 | + | 306 | WP_001326990.1 | protein YdfV | - |
| KJY95_RS07845 (1604337) | 1604337..1604669 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KJY95_RS07850 (1605106) | 1605106..1605255 | - | 150 | WP_011443592.1 | protein YdfW | - |
| KJY95_RS07855 (1605290) | 1605290..1605568 | - | 279 | Protein_1537 | hypothetical protein | - |
| KJY95_RS07860 (1605552) | 1605552..1605782 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KJY95_RS07865 (1605866) | 1605866..1606273 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KJY95_RS07870 (1606440) | 1606440..1606595 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KJY95_RS22210 (1606597) | 1606597..1606725 | + | 129 | WP_000344964.1 | protein YdfB | - |
| KJY95_RS07875 (1606755) | 1606755..1606973 | + | 219 | WP_001171942.1 | protein YdfC | - |
| KJY95_RS07880 (1607541) | 1607541..1607729 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KJY95_RS07885 (1607726) | 1607726..1607917 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KJY95_RS07890 (1608010) | 1608010..1608777 | + | 768 | Protein_1545 | exonuclease | - |
| KJY95_RS07895 (1608774) | 1608774..1609469 | + | 696 | Protein_1546 | IS3 family transposase IS2 | Transposase |
| KJY95_RS07900 (1609483) | 1609483..1610640 | + | 1158 | Protein_1547 | Putative defective protein IntQ ; Integrase | Integrase |
| KJY95_RS07905 (1610828) | 1610828..1611847 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KJY95_RS07910 (1611859) | 1611859..1613073 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KJY95_RS07915 (1613279) | 1613279..1613605 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| KJY95_RS07920 (1613740) | 1613740..1614081 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KJY95_RS07925 (1614116) | 1614116..1614676 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KJY95_RS07930 (1614679) | 1614679..1615389 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |