MGE detailed information
MGE type: Conjugative plasmid MGE length: 115220 bp
Accession: NZ_CP076278 Location: 1..115220 Organism: Escherichia coli strain SA31-1 Replicon: plasmid pSA31IncI1
Accession: NZ_CP076278 Location: 1..115220 Organism: Escherichia coli strain SA31-1 Replicon: plasmid pSA31IncI1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A21_RS24505 (553) | 553..783 | + | 231 | WP_228772074.1 | ash family protein | - |
| A7A21_RS24510 (701) | 701..988 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| A7A21_RS24515 (1430) | 1430..1963 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| A7A21_RS24520 (2216) | 2216..2899 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| A7A21_RS24525 (3072) | 3072..3623 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| A7A21_RS24530 (3787) | 3787..4041 | + | 255 | WP_001492938.1 | PilI type IV pilus biogenesis protein | - |
| A7A21_RS24535 (4227) | 4227..4523 | + | 297 | WP_001571594.1 | hypothetical protein | - |
| A7A21_RS24540 (5144) | 5144..6211 | + | 1068 | WP_257115084.1 | type IV pilus biogenesis lipoprotein PilL | - |
| A7A21_RS24545 (6211) | 6211..6648 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| A7A21_RS24550 (6662) | 6662..8344 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| A7A21_RS24555 (8337) | 8337..9632 | + | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| A7A21_RS24560 (9619) | 9619..9912 | + | 294 | WP_253704687.1 | type IV pilus biogenesis protein PilP | - |
| A7A21_RS24565 (9903) | 9903..10070 | + | 168 | WP_001442750.1 | type IV pilus biogenesis protein PilP | - |
| A7A21_RS24570 (10081) | 10081..11634 | + | 1554 | WP_001492932.1 | ATPase, T2SS/T4P/T4SS family | - |
| A7A21_RS24575 (11647) | 11647..12744 | + | 1098 | WP_001492931.1 | type II secretion system F family protein | - |
| A7A21_RS24580 (12762) | 12762..13376 | + | 615 | WP_001542527.1 | type 4 pilus major pilin | - |
| A7A21_RS24585 (13386) | 13386..13946 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| A7A21_RS24590 (13931) | 13931..14587 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
| A7A21_RS24595 (14587) | 14587..15879 | + | 1293 | WP_257115085.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| A7A21_RS24600 (15876) | 15876..16283 | - | 408 | WP_257115086.1 | prepilin, shufflon protein A | - |
| A7A21_RS24605 (16282) | 16282..17436 | + | 1155 | WP_001139957.1 | site-specific integrase | - |
| A7A21_RS24610 (17587) | 17587..18411 | + | 825 | WP_001238935.1 | conjugal transfer protein TraE | - |
| A7A21_RS24615 (18497) | 18497..19699 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| A7A21_RS24620 (19759) | 19759..20343 | + | 585 | WP_257115087.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| A7A21_RS24625 (20738) | 20738..21196 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| A7A21_RS24630 (21193) | 21193..22011 | + | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| A7A21_RS24635 (22008) | 22008..23156 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| A7A21_RS24640 (23153) | 23153..23443 | + | 291 | WP_160524895.1 | conjugal transfer protein | - |
| A7A21_RS24645 (23458) | 23458..24009 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| A7A21_RS24650 (24099) | 24099..27866 | + | 3768 | WP_257115089.1 | DUF5710 domain-containing protein | - |
| A7A21_RS24655 (27884) | 27884..28231 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| A7A21_RS24660 (28228) | 28228..28920 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| A7A21_RS24665 (28931) | 28931..29914 | + | 984 | WP_021513963.1 | IncI1-type conjugal transfer protein TraN | - |
| A7A21_RS24670 (29917) | 29917..31206 | + | 1290 | WP_257115090.1 | conjugal transfer protein TraO | - |
| A7A21_RS24675 (31206) | 31206..31910 | + | 705 | WP_257115091.1 | IncI1-type conjugal transfer protein TraP | - |
| A7A21_RS24680 (31910) | 31910..32437 | + | 528 | WP_257115092.1 | conjugal transfer protein TraQ | - |
| A7A21_RS24685 (32488) | 32488..32892 | + | 405 | WP_257115093.1 | IncI1-type conjugal transfer protein TraR | - |
| A7A21_RS24690 (32956) | 32956..33144 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| A7A21_RS24695 (33128) | 33128..33928 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| A7A21_RS24700 (34018) | 34018..37062 | + | 3045 | WP_021555367.1 | IncI1-type conjugal transfer protein TraU | - |
| A7A21_RS24705 (37062) | 37062..37676 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| A7A21_RS24710 (37643) | 37643..38845 | + | 1203 | WP_257115095.1 | IncI1-type conjugal transfer protein TraW | - |
| A7A21_RS24715 (38874) | 38874..39458 | + | 585 | WP_257115097.1 | IncI1-type conjugal transfer protein TraX | - |
| A7A21_RS24720 (39555) | 39555..40463 | + | 909 | Protein_43 | DotA/TraY family protein | - |
| A7A21_RS24725 (40519) | 40519..41732 | + | 1214 | WP_139371347.1 | IS3 family transposase | - |
| A7A21_RS24730 (41774) | 41774..43036 | + | 1263 | Protein_45 | IncI1-type conjugal transfer membrane protein TraY | - |
| A7A21_RS24735 (43112) | 43112..43726 | + | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A7A21_RS24740 (43824) | 43824..44033 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| A7A21_RS24745 (44242) | 44242..44418 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| A7A21_RS24750 (44483) | 44483..44779 | - | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| A7A21_RS24755 (45079) | 45079..45330 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| A7A21_RS24760 (45402) | 45402..45554 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (45604) | 45604..45666 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (45604) | 45604..45666 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (45604) | 45604..45666 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (45604) | 45604..45666 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (45907) | 45907..45962 | + | 56 | NuclAT_1 | - | - |
| - (45907) | 45907..45962 | + | 56 | NuclAT_1 | - | - |
| - (45907) | 45907..45962 | + | 56 | NuclAT_1 | - | - |
| - (45907) | 45907..45962 | + | 56 | NuclAT_1 | - | - |
| A7A21_RS24765 (46156) | 46156..47109 | + | 954 | WP_021513958.1 | hypothetical protein | - |
| A7A21_RS24770 (47327) | 47327..48535 | + | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| A7A21_RS24775 (48554) | 48554..49624 | + | 1071 | WP_257115099.1 | IncI1-type conjugal transfer protein TrbB | - |
| A7A21_RS24780 (49617) | 49617..51914 | + | 2298 | WP_257115100.1 | F-type conjugative transfer protein TrbC | - |
| A7A21_RS24785 (52972) | 52972..53334 | + | 363 | WP_244595851.1 | CPBP family intramembrane metalloprotease | - |
| A7A21_RS24790 (53437) | 53437..54690 | + | 1254 | WP_031618765.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| A7A21_RS24795 (54690) | 54690..56879 | + | 2190 | WP_257115101.1 | peptidase domain-containing ABC transporter | - |
| A7A21_RS24800 (56929) | 56929..57501 | - | 573 | WP_001401844.1 | hypothetical protein | - |
| A7A21_RS24805 (57527) | 57527..60226 | - | 2700 | WP_257115102.1 | IncI1-type relaxase NikB | - |
| A7A21_RS24810 (60237) | 60237..60569 | - | 333 | WP_187217129.1 | IncI1-type relaxosome accessory protein NikA | - |
| A7A21_RS24815 (60803) | 60803..61138 | + | 336 | WP_024227040.1 | hypothetical protein | - |
| A7A21_RS24820 (61224) | 61224..62072 | - | 849 | WP_257115059.1 | DUF4942 domain-containing protein | - |
| A7A21_RS24825 (62652) | 62652..62903 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| A7A21_RS24830 (62934) | 62934..63131 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| A7A21_RS24835 (63154) | 63154..64080 | - | 927 | WP_000038402.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| A7A21_RS24840 (64145) | 64145..64411 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| A7A21_RS24845 (64505) | 64505..64939 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| A7A21_RS24850 (65244) | 65244..65528 | + | 285 | WP_021013251.1 | hypothetical protein | - |
| A7A21_RS24855 (65668) | 65668..66168 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| A7A21_RS24860 (66631) | 66631..67227 | - | 597 | WP_257115060.1 | hypothetical protein | - |
| A7A21_RS24865 (67224) | 67224..67943 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| A7A21_RS24870 (67940) | 67940..68374 | - | 435 | WP_024227063.1 | conjugation system SOS inhibitor PsiB | - |
| A7A21_RS24875 (68429) | 68429..70387 | - | 1959 | WP_257115061.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A21_RS24880 (70446) | 70446..70679 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| A7A21_RS24885 (70737) | 70737..71264 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| A7A21_RS24890 (71466) | 71466..71843 | + | 378 | WP_257115062.1 | hypothetical protein | - |
| A7A21_RS24895 (72035) | 72035..72226 | - | 192 | WP_257115063.1 | hypothetical protein | - |
| A7A21_RS24900 (72223) | 72223..72645 | - | 423 | WP_257115064.1 | DUF1380 domain-containing protein | - |
| A7A21_RS24905 (72692) | 72692..73117 | - | 426 | WP_257115065.1 | antirestriction protein | - |
| A7A21_RS24910 (73535) | 73535..74311 | - | 777 | WP_061066727.1 | hypothetical protein | - |
| A7A21_RS24915 (74362) | 74362..74829 | - | 468 | WP_240089772.1 | DUF1380 family protein | - |
| A7A21_RS24920 (74810) | 74810..75031 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| A7A21_RS24925 (75032) | 75032..75715 | - | 684 | WP_000086174.1 | DNA methylase | - |
| A7A21_RS24930 (75792) | 75792..76102 | - | 311 | Protein_85 | hypothetical protein | - |
| A7A21_RS24935 (76099) | 76099..77001 | - | 903 | WP_257115105.1 | DUF1281 domain-containing protein | - |
| A7A21_RS24940 (77419) | 77419..77667 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| A7A21_RS24945 (77664) | 77664..78101 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7A21_RS24950 (78101) | 78101..79375 | + | 1275 | WP_063077240.1 | Y-family DNA polymerase | - |
| A7A21_RS24955 (79377) | 79377..79793 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| A7A21_RS24960 (79786) | 79786..80766 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| A7A21_RS24965 (81180) | 81180..81488 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| A7A21_RS24970 (81575) | 81575..82219 | - | 645 | WP_001144036.1 | ParA family protein | - |
| A7A21_RS24975 (82399) | 82399..83178 | - | 780 | WP_001164201.1 | site-specific integrase | - |
| A7A21_RS24980 (83180) | 83180..83593 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| A7A21_RS24985 (84158) | 84158..84388 | + | 231 | WP_001604445.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| A7A21_RS24990 (84385) | 84385..84801 | + | 417 | WP_257115067.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A21_RS24995 (84971) | 84971..86371 | - | 1401 | Protein_98 | AAA family ATPase | - |
| A7A21_RS25000 (86403) | 86403..87995 | - | 1593 | WP_257115068.1 | IS66 family transposase | - |
| A7A21_RS25005 (88026) | 88026..88376 | - | 351 | WP_257115069.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A7A21_RS25010 (88373) | 88373..88807 | - | 435 | WP_188926466.1 | transposase | - |
| A7A21_RS25015 (88878) | 88878..90491 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| A7A21_RS25020 (90522) | 90522..90872 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A7A21_RS25025 (90869) | 90869..91294 | - | 426 | WP_257115045.1 | transposase | - |
| A7A21_RS25030 (91365) | 91365..92012 | - | 648 | WP_257115070.1 | PAS domain-containing protein | - |
| A7A21_RS25035 (92358) | 92358..93341 | - | 984 | Protein_106 | IS3 family transposase | - |
| A7A21_RS25040 (93964) | 93964..94620 | + | 657 | WP_257115071.1 | PIG-L deacetylase family protein | - |
| A7A21_RS25045 (94631) | 94631..95827 | + | 1197 | WP_257115072.1 | glycosyltransferase family 2 protein | - |
| A7A21_RS25050 (95805) | 95805..96386 | + | 582 | WP_257115106.1 | acetyltransferase | - |
| A7A21_RS25055 (96388) | 96388..97161 | + | 774 | WP_257115073.1 | YaiO family outer membrane beta-barrel protein | - |
| A7A21_RS25060 (97412) | 97412..97552 | - | 141 | Protein_111 | transcriptional regulator | - |
| A7A21_RS25065 (97924) | 97924..98166 | + | 243 | WP_257115107.1 | hypothetical protein | - |
| A7A21_RS25070 (98258) | 98258..99400 | + | 1143 | WP_257115074.1 | histidine decarboxylase | - |
| A7A21_RS25075 (99586) | 99586..99795 | + | 210 | WP_257115075.1 | hypothetical protein | - |
| A7A21_RS25080 (100090) | 100090..100950 | + | 861 | WP_257115076.1 | alpha/beta hydrolase | - |
| A7A21_RS25085 (101034) | 101034..101419 | - | 386 | Protein_116 | integrase core domain-containing protein | - |
| A7A21_RS25090 (101900) | 101900..102829 | + | 930 | WP_112022570.1 | hypothetical protein | - |
| A7A21_RS25095 (103090) | 103090..103508 | - | 419 | Protein_118 | IS481 family transposase | - |
| A7A21_RS25100 (103753) | 103753..104237 | - | 485 | Protein_119 | IS1 family transposase | - |
| A7A21_RS25105 (104271) | 104271..105248 | - | 978 | WP_257115077.1 | hypothetical protein | - |
| A7A21_RS25110 (105264) | 105264..105764 | - | 501 | WP_257115078.1 | hypothetical protein | - |
| A7A21_RS25115 (105751) | 105751..106443 | - | 693 | WP_257115079.1 | fimbrial chaperone | - |
| A7A21_RS25120 (106436) | 106436..108850 | - | 2415 | WP_257115080.1 | PefC/AfrB family outer membrane usher protein | - |
| A7A21_RS25125 (108949) | 108949..109476 | - | 528 | WP_257115081.1 | hypothetical protein | - |
| A7A21_RS25130 (110139) | 110139..111014 | - | 876 | WP_257115082.1 | AraC family transcriptional regulator | - |
| A7A21_RS25135 (111604) | 111604..112859 | + | 1256 | WP_257115083.1 | IS3 family transposase | - |
| A7A21_RS25140 (113735) | 113735..114766 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|