NZ_CP0762611..115220

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 115220 bp
Accession: NZ_CP076261        Location: 1..115220         Organism: Escherichia coli strain WY517-2       Replicon: plasmid pSA31IncI2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A7A20_RS23700 (553) 553..783 + 231 WP_228772074.1 ash family protein -
A7A20_RS23705 (701) 701..988 + 288 WP_000074849.1 conjugal transfer protein TraA -
A7A20_RS23710 (1430) 1430..1963 + 534 WP_001306770.1 transcription termination/antitermination NusG family protein -
A7A20_RS23715 (2216) 2216..2899 + 684 WP_000213859.1 conjugal transfer protein TraC -
A7A20_RS23720 (3072) 3072..3623 + 552 WP_000744644.1 hypothetical protein -
A7A20_RS23725 (3787) 3787..4041 + 255 WP_001492938.1 PilI type IV pilus biogenesis protein -
A7A20_RS23730 (4227) 4227..4523 + 297 WP_001571594.1 hypothetical protein -
A7A20_RS23735 (5144) 5144..6211 + 1068 WP_257115084.1 hypothetical protein VF
A7A20_RS23740 (6211) 6211..6648 + 438 WP_000539807.1 hypothetical protein VF
A7A20_RS23745 (6662) 6662..8344 + 1683 WP_000748143.1 Outer membrane lipoprotein BfpB VF
A7A20_RS23750 (8337) 8337..9632 + 1296 WP_001388364.1 type 4b pilus protein PilO2 -
A7A20_RS23755 (9619) 9619..9912 + 294 WP_253704687.1 hypothetical protein VF
A7A20_RS23760 (9903) 9903..10070 + 168 WP_001442750.1 type IV pilus biogenesis protein PilP -
A7A20_RS23765 (10081) 10081..11634 + 1554 WP_001492932.1 Toxin coregulated pilus biosynthesis protein T VF
A7A20_RS23770 (11647) 11647..12744 + 1098 WP_001492931.1 Toxin coregulated pilus biosynthesis protein E VF
A7A20_RS23775 (12762) 12762..13376 + 615 WP_001542527.1 hypothetical protein VF
A7A20_RS23780 (13386) 13386..13946 + 561 WP_000014116.1 hypothetical protein VF
A7A20_RS23785 (13931) 13931..14587 + 657 WP_001193553.1 hypothetical protein VF
A7A20_RS23790 (14587) 14587..15879 + 1293 WP_257115085.1 hypothetical protein VF
A7A20_RS23795 (15876) 15876..16283 - 408 WP_257115086.1 prepilin, shufflon protein A -
A7A20_RS23800 (16282) 16282..17436 + 1155 WP_001139957.1 site-specific integrase -
A7A20_RS23805 (17587) 17587..18411 + 825 WP_001238935.1 conjugal transfer protein TraE -
A7A20_RS23810 (18497) 18497..19699 + 1203 WP_000976353.1 conjugal transfer protein TraF -
A7A20_RS23815 (19759) 19759..20343 + 585 WP_257115087.1 lipopolysaccharide core heptose(II)-phosphate phosphatase -
A7A20_RS23820 (20738) 20738..21196 + 459 WP_001079808.1 hypothetical protein VF
A7A20_RS23825 (21193) 21193..22011 + 819 WP_000646097.1 hypothetical protein VF
A7A20_RS23830 (22008) 22008..23156 + 1149 WP_001024972.1 putative protein YggR VF
A7A20_RS23835 (23153) 23153..23443 + 291 WP_160524895.1 conjugal transfer protein -
A7A20_RS23840 (23458) 23458..24009 + 552 WP_000014584.1 Phospholipase D VF
A7A20_RS23845 (24099) 24099..27866 + 3768 WP_257115089.1 DUF5710 domain-containing protein -
A7A20_RS23850 (27884) 27884..28231 + 348 WP_001055900.1 conjugal transfer protein -
A7A20_RS23855 (28228) 28228..28920 + 693 WP_000138551.1 DotI/IcmL family type IV secretion protein -
A7A20_RS23860 (28931) 28931..29914 + 984 WP_021513963.1 hypothetical protein VF
A7A20_RS23865 (29917) 29917..31206 + 1290 WP_257115090.1 conjugal transfer protein TraO -
A7A20_RS23870 (31206) 31206..31910 + 705 WP_257115091.1 IncI1-type conjugal transfer protein TraP -
A7A20_RS23875 (31910) 31910..32437 + 528 WP_257115092.1 conjugal transfer protein TraQ -
A7A20_RS23880 (32488) 32488..32892 + 405 WP_257115093.1 IncI1-type conjugal transfer protein TraR -
A7A20_RS23885 (32956) 32956..33144 + 189 WP_001277255.1 putative conjugal transfer protein TraS -
A7A20_RS23890 (33128) 33128..33928 + 801 WP_001164788.1 IncI1-type conjugal transfer protein TraT -
A7A20_RS23895 (34018) 34018..37062 + 3045 WP_021555367.1 IncI1-type conjugal transfer protein TraU -
A7A20_RS23900 (37062) 37062..37676 + 615 WP_000337399.1 IncI1-type conjugal transfer protein TraV -
A7A20_RS23905 (37643) 37643..38845 + 1203 WP_257115095.1 IncI1-type conjugal transfer protein TraW -
A7A20_RS23910 (38874) 38874..39458 + 585 WP_257115097.1 IncI1-type conjugal transfer protein TraX -
A7A20_RS23915 (39555) 39555..40463 + 909 Protein_43 DotA/TraY family protein -
A7A20_RS23920 (40519) 40519..41732 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
A7A20_RS23925 (41774) 41774..43036 + 1263 Protein_45 IncI1-type conjugal transfer membrane protein TraY -
A7A20_RS23930 (43112) 43112..43726 + 615 WP_000578648.1 plasmid IncI1-type surface exclusion protein ExcA -
A7A20_RS23935 (43824) 43824..44033 + 210 WP_001140543.1 hemolysin expression modulator Hha -
A7A20_RS23940 (44242) 44242..44418 + 177 WP_001054904.1 hypothetical protein -
A7A20_RS23945 (44483) 44483..44779 - 297 WP_001275298.1 DinQ-like type I toxin DqlB -
A7A20_RS23950 (45079) 45079..45330 + 252 WP_001291965.1 hypothetical protein -
A7A20_RS23955 (45402) 45402..45554 - 153 WP_001387489.1 Hok/Gef family protein Toxin Detail
- (45604) 45604..45666 + 63 NuclAT_0 - Antitoxin Detail
- (45604) 45604..45666 + 63 NuclAT_0 - Antitoxin Detail
- (45604) 45604..45666 + 63 NuclAT_0 - Antitoxin Detail
- (45604) 45604..45666 + 63 NuclAT_0 - Antitoxin Detail
- (45907) 45907..45962 + 56 NuclAT_1 - -
- (45907) 45907..45962 + 56 NuclAT_1 - -
- (45907) 45907..45962 + 56 NuclAT_1 - -
- (45907) 45907..45962 + 56 NuclAT_1 - -
A7A20_RS23960 (46156) 46156..47109 + 954 WP_021513958.1 hypothetical protein -
A7A20_RS23965 (47327) 47327..48535 + 1209 WP_001383960.1 IncI1-type conjugal transfer protein TrbA -
A7A20_RS23970 (48554) 48554..49624 + 1071 WP_257115099.1 IncI1-type conjugal transfer protein TrbB -
A7A20_RS23975 (49617) 49617..51914 + 2298 WP_257115100.1 F-type conjugative transfer protein TrbC -
A7A20_RS23980 (52972) 52972..53334 + 363 WP_244595851.1 CPBP family intramembrane metalloprotease -
A7A20_RS23985 (53437) 53437..54690 + 1254 WP_031618765.1 HlyD family efflux transporter periplasmic adaptor subunit -
A7A20_RS23990 (54690) 54690..56879 + 2190 WP_257115101.1 peptidase domain-containing ABC transporter -
A7A20_RS23995 (56929) 56929..57501 - 573 WP_001401844.1 hypothetical protein -
A7A20_RS24000 (57527) 57527..60226 - 2700 WP_257115102.1 Protein TraI Relaxase
A7A20_RS24005 (60237) 60237..60569 - 333 WP_187217129.1 IncI1-type relaxosome accessory protein NikA -
A7A20_RS24010 (60803) 60803..61138 + 336 WP_024227040.1 hypothetical protein -
A7A20_RS24015 (61224) 61224..62072 - 849 WP_257115059.1 DUF4942 domain-containing protein -
A7A20_RS24020 (62652) 62652..62903 + 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
A7A20_RS24025 (62934) 62934..63131 - 198 WP_001348086.1 hypothetical protein -
A7A20_RS24030 (63154) 63154..64080 - 927 WP_000038402.1 Recombination-promoting nuclease RpnA VF
A7A20_RS24035 (64145) 64145..64411 - 267 WP_001247862.1 hypothetical protein -
A7A20_RS24040 (64505) 64505..64939 - 435 WP_000218863.1 hypothetical protein -
A7A20_RS24045 (65668) 65668..66168 - 501 WP_000117611.1 antirestriction protein ArdA -
A7A20_RS24050 (66631) 66631..67227 - 597 WP_257115060.1 hypothetical protein -
A7A20_RS24055 (67224) 67224..67943 - 720 WP_001276261.1 plasmid SOS inhibition protein A -
A7A20_RS24060 (67940) 67940..68374 - 435 WP_024227063.1 conjugation system SOS inhibitor PsiB -
A7A20_RS24065 (68429) 68429..70387 - 1959 WP_257115061.1 ParB/RepB/Spo0J family partition protein -
A7A20_RS24070 (70446) 70446..70679 - 234 WP_000006012.1 DUF905 family protein -
A7A20_RS24075 (70737) 70737..71264 - 528 WP_001276114.1 single-stranded DNA-binding protein -
A7A20_RS24080 (72035) 72035..72226 - 192 WP_257115063.1 hypothetical protein -
A7A20_RS24085 (72223) 72223..72645 - 423 WP_257115064.1 DUF1380 domain-containing protein -
A7A20_RS24090 (72692) 72692..73117 - 426 WP_257115065.1 antirestriction protein -
A7A20_RS24095 (73535) 73535..74311 - 777 WP_061066727.1 hypothetical protein -
A7A20_RS24100 (74362) 74362..74829 - 468 WP_240089772.1 DUF1380 family protein -
A7A20_RS24105 (74810) 74810..75031 - 222 WP_001104879.1 hypothetical protein -
A7A20_RS24110 (75032) 75032..75715 - 684 WP_000086174.1 DNA methylase -
A7A20_RS24115 (75792) 75792..76102 - 311 Protein_83 hypothetical protein -
A7A20_RS24120 (76099) 76099..77001 - 903 WP_257115105.1 DUF1281 domain-containing protein -
A7A20_RS24125 (77419) 77419..77667 + 249 WP_000618111.1 DinI-like family protein -
A7A20_RS24130 (77664) 77664..78101 + 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
A7A20_RS24135 (78101) 78101..79375 + 1275 WP_063077240.1 Y-family DNA polymerase -
A7A20_RS24140 (79377) 79377..79793 - 417 WP_001278818.1 plasmid partitioning/stability family protein -
A7A20_RS24145 (79786) 79786..80766 - 981 WP_000688514.1 plasmid segregation protein ParM -
A7A20_RS24150 (81180) 81180..81488 - 309 WP_000030199.1 hypothetical protein -
A7A20_RS24155 (81575) 81575..82219 - 645 WP_001144036.1 ParA family protein -
A7A20_RS24160 (82399) 82399..83178 - 780 WP_001164201.1 site-specific integrase -
A7A20_RS24165 (83180) 83180..83593 - 414 WP_000465043.1 hypothetical protein -
A7A20_RS24170 (84158) 84158..84388 + 231 WP_001604445.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
A7A20_RS24175 (84385) 84385..84801 + 417 WP_257115067.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
A7A20_RS24180 (84971) 84971..86371 - 1401 Protein_96 AAA family ATPase -
A7A20_RS24185 (86403) 86403..87995 - 1593 WP_257115068.1 IS66 family transposase ISEc47 Transposase
A7A20_RS24190 (88026) 88026..88376 - 351 WP_257115069.1 IS66 family transposase IS682 Transposase
A7A20_RS24195 (88373) 88373..88807 - 435 WP_188926466.1 IS66 family transposase ISEc43 Transposase
A7A20_RS24200 (88878) 88878..90491 - 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
A7A20_RS24205 (90522) 90522..90872 - 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
A7A20_RS24210 (90869) 90869..91294 - 426 WP_257115045.1 IS66 family transposase ISEc23 Transposase
A7A20_RS24215 (91365) 91365..92012 - 648 WP_257115070.1 PAS domain-containing protein -
A7A20_RS24220 (92358) 92358..93341 - 984 Protein_104 IS3 family transposase -
A7A20_RS24225 (93964) 93964..94620 + 657 WP_257115071.1 PIG-L deacetylase family protein -
A7A20_RS24230 (94631) 94631..95827 + 1197 WP_257115072.1 glycosyltransferase family 2 protein -
A7A20_RS24235 (95805) 95805..96386 + 582 WP_257115106.1 acetyltransferase -
A7A20_RS24240 (96388) 96388..97161 + 774 WP_257115073.1 YaiO family outer membrane beta-barrel protein -
A7A20_RS24245 (97412) 97412..97552 - 141 Protein_109 transcriptional regulator -
A7A20_RS24250 (97924) 97924..98166 + 243 WP_257115107.1 hypothetical protein -
A7A20_RS24255 (98258) 98258..99400 + 1143 WP_257115074.1 Histidine decarboxylase VF
A7A20_RS24260 (99586) 99586..99795 + 210 WP_257115075.1 hypothetical protein -
A7A20_RS24265 (100090) 100090..100950 + 861 WP_257115076.1 alpha/beta hydrolase -
A7A20_RS24270 (101034) 101034..101419 - 386 Protein_114 IS481 family transposase ISErsp1 Transposase
A7A20_RS24275 (101900) 101900..102829 + 930 WP_112022570.1 hypothetical protein -
A7A20_RS24280 (103090) 103090..103508 - 419 Protein_116 IS481 family transposase ISErsp1 Transposase
A7A20_RS24285 (103753) 103753..104237 - 485 Protein_117 IS1 family transposase -
A7A20_RS24290 (104271) 104271..105248 - 978 WP_257115077.1 hypothetical protein -
A7A20_RS24295 (105264) 105264..105764 - 501 WP_257115078.1 hypothetical protein -
A7A20_RS24300 (105751) 105751..106443 - 693 WP_257115079.1 Chaperone protein FaeE VF
A7A20_RS24305 (106436) 106436..108850 - 2415 WP_257115080.1 Outer membrane usher protein FimD VF
A7A20_RS24310 (108949) 108949..109476 - 528 WP_257115081.1 hypothetical protein VF
A7A20_RS24315 (110139) 110139..111014 - 876 WP_257115082.1 AraC family transcriptional regulator -
A7A20_RS24320 (111604) 111604..112859 + 1256 WP_257115083.1 IS3 family transposase ISSen1 Transposase
A7A20_RS24325 (113735) 113735..114766 - 1032 WP_000907873.1 plasmid replication initiator RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance