MGE detailed information
MGE type: Conjugative plasmid MGE length: 90123 bp
Accession: NZ_CP075699 Location: 1..90123 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-b
Accession: NZ_CP075699 Location: 1..90123 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX52_RS26030 (JFX52_26030) | 1..873 | + | 873 | WP_198777253.1 | incFII family plasmid replication initiator RepA | - |
| JFX52_RS26035 (JFX52_26035) | 1778..2062 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JFX52_RS26040 (JFX52_26040) | 2062..2337 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFX52_RS26045 (JFX52_26045) | 2443..2646 | + | 204 | Protein_3 | hypothetical protein | - |
| JFX52_RS26050 (JFX52_26050) | 2915..3181 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| JFX52_RS26055 (JFX52_26055) | 3319..3921 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| JFX52_RS26060 (JFX52_26060) | 4275..5621 | + | 1347 | WP_001132021.1 | protein YagA | - |
| JFX52_RS26065 (JFX52_26065) | 6220..6522 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| JFX52_RS26070 (JFX52_26070) | 6519..7145 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| JFX52_RS26075 (JFX52_26075) | 7397..8668 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| JFX52_RS26080 (JFX52_26080) | 8668..9105 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JFX52_RS26085 (JFX52_26085) | 9102..9350 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JFX52_RS26090 (JFX52_26090) | 9769..10671 | + | 903 | WP_192842424.1 | DUF1281 domain-containing protein | - |
| JFX52_RS26095 (JFX52_26095) | 10675..10980 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| JFX52_RS26100 (JFX52_26100) | 11056..11739 | + | 684 | WP_000086137.1 | DNA methylase | - |
| JFX52_RS26105 (JFX52_26105) | 11740..11961 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| JFX52_RS26110 (JFX52_26110) | 11891..12409 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| JFX52_RS26115 (JFX52_26115) | 12454..13224 | + | 771 | WP_032181158.1 | hypothetical protein | - |
| JFX52_RS26120 (JFX52_26120) | 13640..14065 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| JFX52_RS26125 (JFX52_26125) | 14112..14534 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| JFX52_RS26130 (JFX52_26130) | 14531..14722 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JFX52_RS26135 (JFX52_26135) | 14794..15108 | + | 315 | WP_005112260.1 | hypothetical protein | - |
| JFX52_RS26140 (JFX52_26140) | 15492..16019 | + | 528 | WP_001401998.1 | single-stranded DNA-binding protein | - |
| JFX52_RS26145 (JFX52_26145) | 16077..16310 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| JFX52_RS26150 (JFX52_26150) | 16369..18327 | + | 1959 | WP_062860891.1 | ParB/RepB/Spo0J family partition protein | - |
| JFX52_RS26155 (JFX52_26155) | 18382..18816 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| JFX52_RS26160 (JFX52_26160) | 18813..19532 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| JFX52_RS26165 (JFX52_26165) | 19529..20125 | + | 597 | WP_001537302.1 | hypothetical protein | - |
| JFX52_RS26170 (JFX52_26170) | 20587..21087 | + | 501 | WP_062860893.1 | antirestriction protein ArdA | - |
| JFX52_RS26175 (JFX52_26175) | 21819..22253 | + | 435 | WP_000218859.1 | hypothetical protein | - |
| JFX52_RS26180 (JFX52_26180) | 22347..22613 | + | 267 | WP_001546460.1 | hypothetical protein | - |
| JFX52_RS26185 (JFX52_26185) | 22678..23616 | + | 939 | WP_198785062.1 | Recombination-promoting nuclease RpnA | VF |
| JFX52_RS26190 (JFX52_26190) | 23616..23861 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| JFX52_RS26195 (JFX52_26195) | 23892..24143 | - | 252 | WP_033804399.1 | hypothetical protein | - |
| JFX52_RS28420 | 24301..24477 | - | 177 | WP_164473670.1 | hypothetical protein | - |
| JFX52_RS26205 (JFX52_26205) | 24721..25569 | + | 849 | WP_062860898.1 | DUF4942 domain-containing protein | - |
| JFX52_RS26210 (JFX52_26210) | 25654..25989 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JFX52_RS26215 (JFX52_26215) | 26221..26553 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| JFX52_RS26220 (JFX52_26220) | 26565..29276 | + | 2712 | WP_062860900.1 | Protein TraI | Relaxase |
| JFX52_RS26225 (JFX52_26225) | 29344..29775 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| JFX52_RS26230 (JFX52_26230) | 29873..30103 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| JFX52_RS26235 (JFX52_26235) | 30559..31236 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26240 (JFX52_26240) | 31236..31583 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26245 (JFX52_26245) | 31603..33174 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26250 (JFX52_26250) | 33277..35580 | - | 2304 | WP_000077664.1 | F-type conjugative transfer protein TrbC | - |
| JFX52_RS26255 (JFX52_26255) | 35561..36685 | - | 1125 | WP_012605160.1 | DsbC family protein | - |
| JFX52_RS26260 (JFX52_26260) | 36682..38034 | - | 1353 | WP_198777282.1 | conjugal transfer protein TrbA | - |
| JFX52_RS28640 | 38533..38631 | + | 99 | WP_001681653.1 | DinQ-like type I toxin DqlB | - |
| JFX52_RS28645 | 39230..39325 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| JFX52_RS26270 (JFX52_26270) | 39388..39564 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| JFX52_RS26275 (JFX52_26275) | 39714..40181 | - | 468 | WP_001681654.1 | thermonuclease family protein | - |
| JFX52_RS26280 (JFX52_26280) | 40346..40969 | + | 624 | WP_021561201.1 | helix-turn-helix domain-containing protein | - |
| JFX52_RS26285 (JFX52_26285) | 41167..41379 | - | 213 | WP_000264905.1 | hypothetical protein | - |
| JFX52_RS26290 (JFX52_26290) | 41386..41751 | - | 366 | WP_062896960.1 | hypothetical protein | - |
| JFX52_RS26295 (JFX52_26295) | 41763..41954 | - | 192 | WP_024187058.1 | hypothetical protein | - |
| JFX52_RS26300 (JFX52_26300) | 42050..42292 | - | 243 | WP_021561198.1 | hypothetical protein | - |
| JFX52_RS26305 (JFX52_26305) | 42622..42774 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| JFX52_RS26315 (JFX52_26315) | 43088..43738 | - | 651 | WP_001044247.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JFX52_RS26320 (JFX52_26320) | 43827..45992 | - | 2166 | WP_198777251.1 | DotA/TraY family protein | - |
| JFX52_RS26325 (JFX52_26325) | 46065..46634 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| JFX52_RS26330 (JFX52_26330) | 46631..47836 | - | 1206 | WP_001189542.1 | conjugal transfer protein TraW | - |
| JFX52_RS26335 (JFX52_26335) | 47794..48414 | - | 621 | WP_000286858.1 | hypothetical protein | - |
| JFX52_RS26340 (JFX52_26340) | 48414..51458 | - | 3045 | WP_198777252.1 | ATP-binding protein | - |
| JFX52_RS26345 (JFX52_26345) | 51634..52017 | - | 384 | WP_225394224.1 | hypothetical protein | - |
| JFX52_RS26350 (JFX52_26350) | 52014..52373 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| JFX52_RS26355 (JFX52_26355) | 52428..53246 | - | 819 | WP_072107751.1 | conjugal transfer protein TraT | - |
| JFX52_RS28650 (JFX52_26360) | 53161..53412 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| JFX52_RS26365 (JFX52_26365) | 53469..53867 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| JFX52_RS26370 (JFX52_26370) | 53914..54444 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| JFX52_RS26375 (JFX52_26375) | 54441..55154 | - | 714 | WP_032331806.1 | conjugal transfer protein TraP | - |
| JFX52_RS26380 (JFX52_26380) | 55151..56488 | - | 1338 | WP_062860773.1 | conjugal transfer protein TraO | - |
| JFX52_RS26385 (JFX52_26385) | 56492..57466 | - | 975 | WP_001681667.1 | hypothetical protein | VF |
| JFX52_RS26390 (JFX52_26390) | 57477..58172 | - | 696 | WP_062860775.1 | DotI/IcmL family type IV secretion protein | - |
| JFX52_RS26395 (JFX52_26395) | 58184..58534 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| JFX52_RS26400 (JFX52_26400) | 58551..62612 | - | 4062 | WP_062860777.1 | DUF5710 domain-containing protein | - |
| JFX52_RS26405 (JFX52_26405) | 62966..63547 | - | 582 | WP_021561191.1 | hypothetical protein | - |
| JFX52_RS26410 (JFX52_26410) | 63779..64069 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| JFX52_RS26415 (JFX52_26415) | 64066..65214 | - | 1149 | WP_021565170.1 | putative protein YggR | VF |
| JFX52_RS26420 (JFX52_26420) | 65198..66034 | - | 837 | WP_012605182.1 | hypothetical protein | VF |
| JFX52_RS26425 (JFX52_26425) | 66031..66489 | - | 459 | WP_001681674.1 | DotD/TraH family lipoprotein | - |
| JFX52_RS26430 (JFX52_26430) | 66593..67795 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| JFX52_RS26435 (JFX52_26435) | 67897..68718 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| JFX52_RS26440 (JFX52_26440) | 68980..69318 | + | 339 | WP_001681677.1 | hypothetical protein | - |
| JFX52_RS26445 (JFX52_26445) | 69605..70729 | - | 1125 | WP_062860780.1 | site-specific integrase | - |
| JFX52_RS26450 (JFX52_26450) | 70881..71177 | + | 297 | WP_001014413.1 | tail fiber protein | - |
| JFX52_RS26455 (JFX52_26455) | 71183..72424 | - | 1242 | WP_088548964.1 | hypothetical protein | VF |
| JFX52_RS26460 (JFX52_26460) | 72421..73128 | - | 708 | WP_001114349.1 | A24 family peptidase | - |
| JFX52_RS26465 (JFX52_26465) | 73088..73570 | - | 483 | WP_021561187.1 | hypothetical protein | VF |
| JFX52_RS26470 (JFX52_26470) | 73618..74154 | - | 537 | WP_001011500.1 | type 4 pilus major pilin | - |
| JFX52_RS26475 (JFX52_26475) | 74204..75304 | - | 1101 | WP_001211427.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JFX52_RS26480 (JFX52_26480) | 75306..76814 | - | 1509 | WP_012605185.1 | Type II secretion system protein E | VF |
| JFX52_RS26485 (JFX52_26485) | 77005..77256 | + | 252 | WP_001681796.1 | hypothetical protein | Antitoxin Detail |
| JFX52_RS26490 (JFX52_26490) | 77246..77527 | + | 282 | WP_001681795.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFX52_RS26495 (JFX52_26495) | 77566..77784 | - | 219 | WP_175125356.1 | hypothetical protein | - |
| JFX52_RS26500 (JFX52_26500) | 77837..78289 | - | 453 | WP_001681794.1 | hypothetical protein | VF |
| JFX52_RS26505 (JFX52_26505) | 78279..79574 | - | 1296 | WP_077881449.1 | type 4b pilus protein PilO2 | - |
| JFX52_RS26510 (JFX52_26510) | 79595..81214 | - | 1620 | WP_042014174.1 | Outer membrane lipoprotein BfpB | VF |
| JFX52_RS26515 (JFX52_26515) | 81245..81682 | - | 438 | WP_001681791.1 | type IV pilus biogenesis protein PilM | - |
| JFX52_RS26520 (JFX52_26520) | 81687..82754 | - | 1068 | WP_062860911.1 | hypothetical protein | VF |
| JFX52_RS26525 (JFX52_26525) | 82873..83301 | + | 429 | WP_016237239.1 | hypothetical protein | - |
| JFX52_RS26530 (JFX52_26530) | 83291..84178 | - | 888 | WP_001681788.1 | hypothetical protein | - |
| JFX52_RS26535 (JFX52_26535) | 84585..84932 | - | 348 | WP_001681787.1 | hypothetical protein | - |
| JFX52_RS26540 (JFX52_26540) | 85048..85290 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| JFX52_RS26545 (JFX52_26545) | 85371..87065 | - | 1695 | WP_000482666.1 | flotillin family protein | - |
| JFX52_RS26550 (JFX52_26550) | 87092..87712 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| JFX52_RS26555 (JFX52_26555) | 87979..88641 | - | 663 | WP_025672399.1 | hypothetical protein | - |
| JFX52_RS26560 (JFX52_26560) | 88782..89423 | - | 642 | WP_077697113.1 | transcription termination factor NusG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|