MGE detailed information
MGE type: Genomic_island MGE length: 59431 bp
Accession: NZ_CP075649 Location: 4400607..4460037 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Accession: NZ_CP075649 Location: 4400607..4460037 Organism: Escherichia coli strain STEC17-190 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX56_RS21015 (4396475) | 4396475..4398559 | + | 2085 | WP_001462982.1 | protease Lon-related BREX system protein BrxL | - |
| JFX56_RS21020 (4398678) | 4398678..4400027 | + | 1350 | WP_000766444.1 | phospholipase D-like domain-containing protein | - |
| JFX56_RS21025 (4400203) | 4400203..4400523 | - | 321 | Protein_4142 | IS3 family transposase | - |
| JFX56_RS21030 (4400607) | 4400607..4401380 | + | 774 | WP_000157137.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| JFX56_RS21035 (4401373) | 4401373..4402290 | + | 918 | WP_000361918.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JFX56_RS21040 (4402804) | 4402804..4403466 | - | 663 | WP_000357928.1 | hypothetical protein | - |
| JFX56_RS21045 (4403539) | 4403539..4404180 | - | 642 | Protein_4146 | integrase arm-type DNA-binding domain-containing protein | - |
| JFX56_RS21050 (4404647) | 4404647..4404790 | - | 144 | Protein_4147 | hypothetical protein | - |
| JFX56_RS21055 (4404875) | 4404875..4405072 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| JFX56_RS21060 (4405092) | 4405092..4405580 | - | 489 | WP_000777664.1 | DUF5983 family protein | - |
| JFX56_RS21065 (4405577) | 4405577..4405954 | - | 378 | WP_000854919.1 | TA system toxin CbtA family protein | Toxin Detail |
| JFX56_RS21070 (4406001) | 4406001..4406375 | - | 375 | WP_063114613.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| JFX56_RS21075 (4406455) | 4406455..4406676 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| JFX56_RS21080 (4406763) | 4406763..4407239 | - | 477 | WP_001186725.1 | RadC family protein | - |
| JFX56_RS21085 (4407255) | 4407255..4407734 | - | 480 | WP_000706981.1 | antirestriction protein | - |
| JFX56_RS21090 (4407834) | 4407834..4407974 | + | 141 | WP_000997937.1 | hypothetical protein | - |
| JFX56_RS21095 (4408000) | 4408000..4408818 | - | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| JFX56_RS21100 (4408908) | 4408908..4409141 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| JFX56_RS21105 (4409147) | 4409147..4409824 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| JFX56_RS21110 (4409972) | 4409972..4410652 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| JFX56_RS21115 (4410855) | 4410855..4411739 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| JFX56_RS21120 (4411845) | 4411845..4412807 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| JFX56_RS21125 (4412804) | 4412804..4413658 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| JFX56_RS21130 (4415321) | 4415321..4415494 | - | 174 | WP_001499034.1 | hypothetical protein | - |
| JFX56_RS21135 (4415674) | 4415674..4416405 | + | 732 | WP_109552276.1 | inovirus Gp2 family protein | - |
| JFX56_RS21140 (4416915) | 4416915..4417367 | + | 453 | WP_001100706.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| JFX56_RS21145 (4417796) | 4417796..4418397 | + | 602 | Protein_4166 | IS481 family transposase ISKpn28 | Transposase |
| JFX56_RS24855 (4418386) | 4418386..4418601 | + | 216 | WP_095516826.1 | IS481 family transposase ISKpn28 | Transposase |
| JFX56_RS21150 (4420019) | 4420019..4420585 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| JFX56_RS21155 (4420832) | 4420832..4421407 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| JFX56_RS21160 (4421476) | 4421476..4421712 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| JFX56_RS21165 (4421709) | 4421709..4421867 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| JFX56_RS21170 (4421955) | 4421955..4422503 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| JFX56_RS21175 (4422522) | 4422522..4422866 | - | 345 | Protein_4173 | ProQ/FINO family protein | - |
| JFX56_RS21180 (4423172) | 4423172..4423345 | + | 174 | WP_153274857.1 | hypothetical protein | - |
| JFX56_RS21185 (4423759) | 4423759..4424193 | + | 435 | WP_023566306.1 | H-NS family nucleoid-associated regulatory protein | - |
| JFX56_RS21190 (4424610) | 4424610..4425179 | - | 570 | WP_001672323.1 | hypothetical protein | - |
| JFX56_RS21195 (4425280) | 4425280..4426512 | - | 1233 | WP_000271620.1 | dNTP triphosphohydrolase | - |
| JFX56_RS21205 (4427900) | 4427900..4427962 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| JFX56_RS21210 (4427973) | 4427973..4428670 | - | 698 | Protein_4180 | IS1-like element IS1F family transposase | - |
| JFX56_RS21215 (4428757) | 4428757..4428825 | - | 69 | WP_211180522.1 | protein YkiE | - |
| JFX56_RS21220 (4428962) | 4428962..4429483 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| JFX56_RS21225 (4429480) | 4429480..4430433 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| JFX56_RS21230 (4430520) | 4430520..4432844 | + | 2325 | WP_198776752.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| JFX56_RS21235 (4432889) | 4432889..4433791 | + | 903 | WP_000879160.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| JFX56_RS21240 (4433788) | 4433788..4434786 | + | 999 | WP_000125182.1 | Vitamin B12 import system permease protein BtuC | VF |
| JFX56_RS21245 (4434783) | 4434783..4435739 | + | 957 | WP_000684856.1 | Vitamin B12 import system permease protein BtuC | VF |
| JFX56_RS21250 (4435740) | 4435740..4436507 | + | 768 | WP_000175457.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JFX56_RS21255 (4436916) | 4436916..4438067 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JFX56_RS24860 (4438064) | 4438064..4438144 | - | 81 | Protein_4190 | hypothetical protein | - |
| JFX56_RS21260 (4438132) | 4438132..4439037 | + | 906 | Protein_4191 | IS3 family transposase ISEc31 | Transposase |
| JFX56_RS21265 (4439051) | 4439051..4440034 | - | 984 | Protein_4192 | IS66 family transposase ISCro1 | Transposase |
| JFX56_RS21270 (4440054) | 4440054..4440401 | - | 348 | WP_000623562.1 | IS66 family transposase ISCro1 | Transposase |
| JFX56_RS21275 (4440401) | 4440401..4441051 | - | 651 | WP_000993927.1 | IS66 family transposase IS679 | Transposase |
| JFX56_RS21280 (4441343) | 4441343..4442707 | - | 1365 | WP_000948757.1 | hypothetical protein | VF |
| JFX56_RS21285 (4443106) | 4443106..4444323 | + | 1218 | WP_001317576.1 | phosphoglycerate transport regulator PgtC | - |
| JFX56_RS21290 (4444320) | 4444320..4446329 | + | 2010 | WP_000790444.1 | two-component system sensor histidine kinase PgtB | - |
| JFX56_RS21295 (4446319) | 4446319..4447566 | + | 1248 | WP_000952905.1 | two-component system response regulator PgtA | - |
| JFX56_RS21300 (4447904) | 4447904..4448766 | + | 863 | Protein_4199 | IS21 family transposase ISEc10 | Transposase |
| JFX56_RS21305 (4449260) | 4449260..4449475 | + | 216 | WP_000021000.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| JFX56_RS21310 (4449520) | 4449520..4450032 | + | 513 | WP_000920488.1 | hypothetical protein | VF |
| JFX56_RS21315 (4450120) | 4450120..4450707 | + | 588 | WP_198779773.1 | hypothetical protein | VF |
| JFX56_RS21320 (4450828) | 4450828..4453338 | + | 2511 | Protein_4203 | hypothetical protein | VF |
| JFX56_RS21325 (4453407) | 4453407..4454138 | + | 732 | WP_001171049.1 | hypothetical protein | VF |
| JFX56_RS21330 (4454175) | 4454175..4454738 | + | 564 | WP_001077947.1 | pilus-assembly fibrillin subunit | - |
| JFX56_RS21335 (4454822) | 4454822..4455340 | + | 519 | WP_001223371.1 | hypothetical protein | VF |
| JFX56_RS21340 (4455363) | 4455363..4456355 | + | 993 | WP_000878336.1 | hypothetical protein | - |
| JFX56_RS21345 (4456412) | 4456412..4457194 | + | 783 | WP_197732565.1 | EAL domain-containing protein | - |
| JFX56_RS21350 (4457464) | 4457464..4457658 | - | 195 | Protein_4209 | transposase | - |
| JFX56_RS21355 (4457991) | 4457991..4458223 | - | 233 | Protein_4210 | IS110 family transposase | - |
| JFX56_RS21360 (4458772) | 4458772..4460037 | - | 1266 | WP_001218930.1 | hypothetical protein ; Integrase | Integrase |
| JFX56_RS21370 (4460504) | 4460504..4461523 | + | 1020 | WP_001349988.1 | NADPH-dependent aldehyde reductase Ahr | - |
| JFX56_RS21375 (4461653) | 4461653..4463155 | + | 1503 | WP_001356017.1 | DUF853 domain-containing protein | - |
| JFX56_RS21380 (4463274) | 4463274..4464356 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|