MGE detailed information
MGE type: Prophage MGE length: 142589 bp
Accession: NZ_CP075487 Location: 2886858..3029446 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Accession: NZ_CP075487 Location: 2886858..3029446 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI26_RS14550 (2882582) | 2882582..2883475 | - | 894 | WP_000436922.1 | YcbJ family phosphotransferase | - |
| IGI26_RS14555 (2883629) | 2883629..2884375 | - | 747 | WP_000011603.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| IGI26_RS14560 (2884372) | 2884372..2884554 | - | 183 | WP_000350058.1 | protein YcaR | - |
| IGI26_RS14565 (2884606) | 2884606..2885838 | - | 1233 | WP_193115112.1 | crosslink repair DNA glycosylase YcaQ | - |
| IGI26_RS14570 (2885875) | 2885875..2886861 | - | 987 | WP_000570540.1 | tetraacyldisaccharide 4'-kinase | - |
| IGI26_RS14575 (2886858) | 2886858..2888606 | - | 1749 | WP_000551270.1 | hypothetical protein | VF |
| IGI26_RS14580 (2888643) | 2888643..2890907 | - | 2265 | WP_185229457.1 | ComEC family protein | - |
| IGI26_RS14585 (2891115) | 2891115..2891399 | - | 285 | WP_000167339.1 | integration host factor subunit beta | - |
| IGI26_RS14590 (2891559) | 2891559..2893232 | - | 1674 | WP_096093210.1 | 30S ribosomal protein S1 | - |
| IGI26_RS14595 (2893343) | 2893343..2894026 | - | 684 | WP_000125016.1 | (d)CMP kinase | - |
| IGI26_RS14600 (2894199) | 2894199..2894963 | - | 765 | WP_001295345.1 | metallopeptidase YcaL | - |
| IGI26_RS14605 (2895132) | 2895132..2896415 | - | 1284 | WP_000445231.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| IGI26_RS14610 (2896486) | 2896486..2897574 | - | 1089 | WP_000057138.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| IGI26_RS14615 (2897773) | 2897773..2898465 | - | 693 | WP_000642849.1 | DUF421 domain-containing protein | - |
| IGI26_RS14620 (2898595) | 2898595..2900355 | + | 1761 | WP_185229458.1 | 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO | - |
| IGI26_RS14625 (2900761) | 2900761..2901618 | + | 858 | WP_000642546.1 | formate transporter FocA | - |
| IGI26_RS14630 (2901673) | 2901673..2903955 | + | 2283 | WP_001292822.1 | formate C-acetyltransferase | - |
| IGI26_RS14635 (2904147) | 2904147..2904887 | + | 741 | WP_000111043.1 | pyruvate formate lyase 1-activating protein | - |
| IGI26_RS14640 (2904969) | 2904969..2905558 | - | 590 | Protein_2756 | NAD(P)H oxidoreductase | - |
| IGI26_RS14645 (2905658) | 2905658..2906566 | + | 909 | WP_001242678.1 | LysR family transcriptional regulator | - |
| IGI26_RS14650 (2906567) | 2906567..2907997 | - | 1431 | WP_000918506.1 | amino acid permease | - |
| IGI26_RS14655 (2908207) | 2908207..2909355 | - | 1149 | WP_000109295.1 | MFS transporter | - |
| IGI26_RS14660 (2909669) | 2909669..2910295 | + | 627 | WP_000165876.1 | isochorismate family cysteine hydrolase YcaC | - |
| IGI26_RS14665 (2910488) | 2910488..2911600 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IGI26_RS14670 (2911680) | 2911680..2912543 | - | 864 | WP_021575080.1 | dimethyl sulfoxide reductase anchor subunit DmsC | - |
| IGI26_RS14675 (2912545) | 2912545..2913162 | - | 618 | WP_021575079.1 | dimethylsulfoxide reductase subunit B | - |
| IGI26_RS14680 (2913173) | 2913173..2915617 | - | 2445 | WP_000850303.1 | dimethylsulfoxide reductase subunit A | - |
| IGI26_RS14685 (2915856) | 2915856..2917148 | - | 1293 | WP_000886683.1 | serine--tRNA ligase | - |
| IGI26_RS14690 (2917239) | 2917239..2918582 | - | 1344 | WP_000067755.1 | replication-associated recombination protein RarA | - |
| IGI26_RS14695 (2918593) | 2918593..2919204 | - | 612 | WP_001295343.1 | outer membrane lipoprotein chaperone LolA | - |
| IGI26_RS14700 (2919359) | 2919359..2923348 | - | 3990 | WP_000077038.1 | DNA translocase FtsK | - |
| IGI26_RS14705 (2923483) | 2923483..2923977 | - | 495 | WP_000228473.1 | leucine-responsive transcriptional regulator Lrp | - |
| IGI26_RS14710 (2924521) | 2924521..2925486 | + | 966 | WP_000537418.1 | thioredoxin-disulfide reductase | - |
| IGI26_RS14715 (2925609) | 2925609..2927375 | + | 1767 | WP_001043577.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| IGI26_RS14720 (2927376) | 2927376..2929097 | + | 1722 | WP_004015322.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| IGI26_RS14725 (2929139) | 2929139..2929843 | + | 705 | WP_001241678.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| IGI26_RS14730 (2930128) | 2930128..2930346 | + | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
| IGI26_RS14740 (2930837) | 2930837..2931679 | - | 843 | WP_193119649.1 | DUF4942 domain-containing protein | - |
| IGI26_RS14745 (2931764) | 2931764..2931961 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| IGI26_RS14750 (2931989) | 2931989..2932186 | - | 198 | Protein_2777 | DUF5983 family protein | - |
| IGI26_RS14755 (2932183) | 2932183..2932560 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| IGI26_RS14760 (2932650) | 2932650..2933018 | - | 369 | WP_024257643.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IGI26_RS14765 (2933098) | 2933098..2933319 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| IGI26_RS14770 (2933388) | 2933388..2933864 | - | 477 | WP_001186747.1 | RadC family protein | - |
| IGI26_RS14775 (2933879) | 2933879..2934364 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| IGI26_RS14780 (2934455) | 2934455..2935273 | - | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| IGI26_RS14785 (2935600) | 2935600..2938446 | - | 2847 | WP_193119650.1 | Ag43/Cah family autotransporter adhesin | - |
| IGI26_RS14790 (2938818) | 2938818..2939690 | - | 873 | WP_063120603.1 | GTPase family protein | - |
| IGI26_RS14795 (2939954) | 2939954..2941510 | + | 1557 | WP_193119651.1 | type I restriction-modification system subunit M | - |
| IGI26_RS14800 (2941507) | 2941507..2942712 | + | 1206 | WP_059239974.1 | restriction endonuclease subunit S | - |
| IGI26_RS14805 (2942834) | 2942834..2945950 | + | 3117 | WP_193119652.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IGI26_RS14810 (2946111) | 2946111..2946377 | - | 267 | Protein_2789 | IS1 family transposase IS1S | Transposase |
| IGI26_RS14815 (2946383) | 2946383..2947374 | + | 992 | Protein_2790 | IS3 family transposase IS3 | Transposase |
| IGI26_RS14820 (2947415) | 2947415..2948773 | - | 1359 | WP_000409871.1 | GGDEF domain-containing protein | - |
| IGI26_RS14825 (2949426) | 2949426..2950123 | + | 698 | WP_225904509.1 | IS1 family transposase IS1A | Transposase |
| IGI26_RS14830 (2950148) | 2950148..2950363 | + | 216 | WP_000588737.1 | type I restriction-modification enzyme R subunit | - |
| IGI26_RS14835 (2950585) | 2950585..2950923 | + | 339 | WP_000117289.1 | hypothetical protein | - |
| IGI26_RS14840 (2951232) | 2951232..2952773 | + | 1542 | WP_069661456.1 | IS21 family transposase ISEc12 | Transposase |
| IGI26_RS14845 (2952788) | 2952788..2953534 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| IGI26_RS14850 (2954033) | 2954033..2955295 | + | 1263 | WP_096263470.1 | hypothetical protein ; Integrase | Integrase |
| IGI26_RS14855 (2955481) | 2955481..2955696 | + | 216 | Protein_2798 | IS3 family transposase IS911 | Transposase |
| IGI26_RS14860 (2955806) | 2955806..2956183 | - | 378 | WP_053291281.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IGI26_RS14865 (2956183) | 2956183..2956404 | - | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IGI26_RS14870 (2956589) | 2956589..2957599 | - | 1011 | WP_193119655.1 | fimbrial protein | - |
| IGI26_RS14875 (2957610) | 2957610..2960096 | - | 2487 | WP_111970038.1 | hypothetical protein | VF |
| IGI26_RS14880 (2960114) | 2960114..2960794 | - | 681 | WP_053270475.1 | hypothetical protein | VF |
| IGI26_RS14885 (2960850) | 2960850..2961413 | - | 564 | WP_193119654.1 | fimbrial protein YehD | - |
| IGI26_RS14895 (2962940) | 2962940..2963282 | - | 343 | Protein_2806 | DEAD/DEAH box helicase | - |
| IGI26_RS14900 (2963389) | 2963389..2963952 | - | 564 | WP_000282094.1 | inovirus-type Gp2 protein | - |
| IGI26_RS14905 (2965162) | 2965162..2966979 | - | 1818 | WP_225904510.1 | hypothetical protein | - |
| IGI26_RS14910 (2967086) | 2967086..2967334 | + | 249 | WP_001349431.1 | AlpA family transcriptional regulator | - |
| IGI26_RS14915 (2967350) | 2967350..2968915 | + | 1566 | WP_065304405.1 | DUF3987 domain-containing protein | - |
| IGI26_RS14920 (2969139) | 2969139..2970347 | - | 1209 | WP_000279862.1 | hypothetical protein ; Integrase | Integrase |
| IGI26_RS14925 (2970981) | 2970981..2973257 | - | 2277 | WP_000934040.1 | hypothetical protein | VF |
| IGI26_RS14930 (2973288) | 2973288..2973608 | - | 321 | WP_000520781.1 | ATP-dependent Clp protease adapter ClpS | - |
| IGI26_RS14935 (2973707) | 2973707..2973781 | - | 75 | WP_001406719.1 | protein YljB | - |
| IGI26_RS14940 (2973931) | 2973931..2974155 | + | 225 | WP_000410785.1 | cold shock-like protein CspD | - |
| IGI26_RS14945 (2974228) | 2974228..2976174 | - | 1947 | WP_000188140.1 | hypothetical protein | VF |
| IGI26_RS14950 (2976171) | 2976171..2977286 | - | 1116 | WP_000746460.1 | macrolide transporter subunit MacA | - |
| IGI26_RS14955 (2977437) | 2977437..2978393 | + | 957 | WP_001380339.1 | VirK/YbjX family protein | - |
| IGI26_RS14960 (2978390) | 2978390..2980048 | - | 1659 | WP_000599802.1 | ATP-dependent endonuclease | - |
| IGI26_RS14965 (2980473) | 2980473..2981168 | + | 696 | WP_001298299.1 | aquaporin Z | - |
| IGI26_RS14970 (2981663) | 2981663..2982562 | + | 900 | WP_001338421.1 | L-lysine exporter LysO | - |
| IGI26_RS14975 (2982706) | 2982706..2984358 | + | 1653 | WP_167787553.1 | hydroxylamine reductase | - |
| IGI26_RS14980 (2984370) | 2984370..2985338 | + | 969 | WP_000178677.1 | NADH oxidoreductase | - |
| IGI26_RS14985 (2985471) | 2985471..2987189 | + | 1719 | WP_000815362.1 | ubiquinone-dependent pyruvate dehydrogenase | - |
| IGI26_RS14990 (2987226) | 2987226..2988227 | + | 1002 | WP_000566372.1 | low-specificity L-threonine aldolase | - |
| IGI26_RS14995 (2988238) | 2988238..2989668 | + | 1431 | WP_001136577.1 | SDR family oxidoreductase | - |
| IGI26_RS15000 (2989767) | 2989767..2990780 | + | 1014 | WP_193115228.1 | NAD(P)-dependent oxidoreductase | - |
| IGI26_RS15005 (2990777) | 2990777..2991607 | - | 831 | WP_001255168.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| IGI26_RS15010 (2991604) | 2991604..2991927 | - | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| IGI26_RS15015 (2992053) | 2992053..2992568 | + | 516 | WP_001270734.1 | lipoprotein | - |
| IGI26_RS15020 (2992786) | 2992786..2993514 | + | 729 | WP_000027213.1 | hypothetical protein | VF |
| IGI26_RS15025 (2993532) | 2993532..2994263 | + | 732 | WP_000756569.1 | arginine ABC transporter substrate-binding protein ArtI | - |
| IGI26_RS15030 (2994270) | 2994270..2994986 | + | 717 | WP_001001691.1 | arginine ABC transporter permease ArtQ | - |
| IGI26_RS15035 (2994986) | 2994986..2995654 | + | 669 | WP_000464491.1 | arginine ABC transporter permease ArtM | - |
| IGI26_RS15040 (2995945) | 2995945..2996676 | + | 732 | WP_001295339.1 | arginine ABC transporter substrate-binding protein ArtJ | - |
| IGI26_RS23735 (2996726) | 2996726..2996824 | - | 99 | Protein_2836 | hypothetical protein | - |
| IGI26_RS15045 (2996875) | 2996875..2998002 | - | 1128 | WP_001149756.1 | 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC | - |
| IGI26_RS15050 (2998043) | 2998043..2998531 | - | 489 | WP_000389260.1 | YbjO family protein | - |
| IGI26_RS15055 (2998591) | 2998591..2999436 | - | 846 | WP_001061665.1 | putrescine ABC transporter permease PotI | - |
| IGI26_RS15060 (2999433) | 2999433..3000386 | - | 954 | WP_000105430.1 | hypothetical protein | VF |
| IGI26_RS15065 (3000396) | 3000396..3001529 | - | 1134 | WP_000996005.1 | hypothetical protein | VF |
| IGI26_RS15070 (3001624) | 3001624..3002736 | - | 1113 | WP_000126073.1 | spermidine/putrescine ABC transporter substrate-binding protein PotF | - |
| IGI26_RS15075 (3003087) | 3003087..3003563 | - | 477 | WP_000203025.1 | YbjN domain-containing protein | - |
| IGI26_RS15080 (3003651) | 3003651..3004553 | - | 903 | WP_000684321.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| IGI26_RS15085 (3004726) | 3004726..3005877 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| IGI26_RS15090 (3005828) | 3005828..3006559 | - | 732 | WP_193115296.1 | nitroreductase NfsA | - |
| IGI26_RS15095 (3006543) | 3006543..3006830 | - | 288 | WP_001201560.1 | DUF1418 family protein | - |
| IGI26_RS15100 (3006990) | 3006990..3007247 | + | 258 | WP_001195240.1 | glutaredoxin 1 | - |
| IGI26_RS15105 (3007277) | 3007277..3007654 | - | 378 | WP_000681108.1 | inner membrane protein YbjM | - |
| IGI26_RS15110 (3007924) | 3007924..3009609 | + | 1686 | WP_001024876.1 | aspartate:alanine antiporter | - |
| IGI26_RS15115 (3009833) | 3009833..3010363 | + | 531 | WP_023147539.1 | hypothetical protein | - |
| IGI26_RS15120 (3010432) | 3010432..3010650 | - | 219 | WP_000972391.1 | ogr/Delta-like zinc finger family protein | - |
| IGI26_RS15125 (3010741) | 3010741..3011142 | - | 402 | Protein_2853 | contractile injection system protein, VgrG/Pvc8 family | - |
| IGI26_RS15130 (3011145) | 3011145..3011348 | - | 204 | Protein_2854 | phage regulatory CII family protein | - |
| IGI26_RS15135 (3011381) | 3011381..3011602 | - | 222 | WP_000188448.1 | hypothetical protein | - |
| IGI26_RS15140 (3011698) | 3011698..3012294 | + | 597 | WP_000107902.1 | phage repressor protein CI | - |
| IGI26_RS15145 (3012374) | 3012374..3013071 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| IGI26_RS15150 (3013092) | 3013092..3014768 | + | 1677 | WP_094888052.1 | DUF4041 domain-containing protein | - |
| IGI26_RS15155 (3014852) | 3014852..3015904 | + | 1053 | WP_000290937.1 | hypothetical protein ; Integrase | Integrase |
| IGI26_RS15160 (3016009) | 3016009..3016545 | - | 537 | WP_001295289.1 | DNA-binding transcriptional regulator RcdA | - |
| IGI26_RS15165 (3016629) | 3016629..3017837 | + | 1209 | WP_000217859.1 | MFS transporter | - |
| IGI26_RS15170 (3017837) | 3017837..3018652 | + | 816 | WP_000023565.1 | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase | - |
| IGI26_RS15175 (3018738) | 3018738..3019022 | + | 285 | WP_000605480.1 | protein YbjH | - |
| IGI26_RS15180 (3019063) | 3019063..3020295 | - | 1233 | WP_001180089.1 | hypothetical protein | ARG |
| IGI26_RS15185 (3020580) | 3020580..3021176 | + | 597 | WP_001295291.1 | undecaprenyl-diphosphate phosphatase | - |
| IGI26_RS15190 (3021234) | 3021234..3021992 | + | 759 | WP_000450121.1 | DNA-binding transcriptional repressor DeoR | - |
| IGI26_RS15195 (3022039) | 3022039..3023241 | - | 1203 | WP_001300708.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| IGI26_RS15200 (3023488) | 3023488..3024114 | + | 627 | WP_001295292.1 | glutathione S-transferase GstB | - |
| IGI26_RS15205 (3024111) | 3024111..3025226 | - | 1116 | WP_000555031.1 | aldose sugar dehydrogenase YliI | - |
| IGI26_RS15210 (3025337) | 3025337..3025720 | - | 384 | WP_000497137.1 | biofilm formation regulator BssR | - |
| IGI26_RS15215 (3025933) | 3025933..3027258 | + | 1326 | WP_000049367.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| IGI26_RS15220 (3027305) | 3027305..3028444 | - | 1140 | Protein_2872 | diguanylate cyclase | - |
| IGI26_RS15225 (3028478) | 3028478..3029446 | + | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| IGI26_RS15230 (3029481) | 3029481..3029699 | - | 219 | Protein_2874 | hypothetical protein | - |
| IGI26_RS15235 (3029707) | 3029707..3032055 | - | 2349 | WP_193115208.1 | EAL domain-containing protein | - |
| IGI26_RS15240 (3032233) | 3032233..3033144 | - | 912 | WP_001236051.1 | glutathione ABC transporter permease GsiD | - |
| IGI26_RS15245 (3033147) | 3033147..3034067 | - | 921 | WP_000936043.1 | glutathione ABC transporter permease GsiC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|