MGE detailed information
MGE type: Conjugative plasmid MGE length: 89891 bp
Accession: NZ_CP075377 Location: 1..89891 Organism: Escherichia coli strain no107 Replicon: plasmid unnamed4
Accession: NZ_CP075377 Location: 1..89891 Organism: Escherichia coli strain no107 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIB02_RS24770 (91) | 91..735 | + | 645 | WP_001144036.1 | ParA family protein | - |
| KIB02_RS24775 (822) | 822..1130 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| KIB02_RS24780 (1544) | 1544..2524 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| KIB02_RS24785 (2517) | 2517..2933 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| KIB02_RS24790 (2935) | 2935..4209 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KIB02_RS24795 (4209) | 4209..4646 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KIB02_RS24800 (4643) | 4643..4891 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KIB02_RS24805 (5309) | 5309..6211 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| KIB02_RS24810 (6215) | 6215..6520 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| KIB02_RS24815 (6596) | 6596..7279 | + | 684 | WP_021513974.1 | DNA methylase | - |
| KIB02_RS24820 (7280) | 7280..7501 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| KIB02_RS24825 (7482) | 7482..7949 | + | 468 | WP_250160049.1 | DUF1380 family protein | - |
| KIB02_RS24830 (8000) | 8000..8776 | + | 777 | WP_213833235.1 | hypothetical protein | - |
| KIB02_RS24835 (9194) | 9194..9619 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KIB02_RS24840 (9666) | 9666..10088 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| KIB02_RS24845 (10085) | 10085..10276 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| KIB02_RS24850 (10414) | 10414..10695 | + | 282 | WP_162713425.1 | hypothetical protein | - |
| KIB02_RS24855 (11047) | 11047..11574 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| KIB02_RS24860 (11632) | 11632..11865 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| KIB02_RS24865 (11924) | 11924..13882 | + | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| KIB02_RS24870 (13937) | 13937..14371 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| KIB02_RS24875 (14368) | 14368..15087 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| KIB02_RS24880 (15084) | 15084..15680 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| KIB02_RS24885 (16143) | 16143..16643 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| KIB02_RS24890 (16783) | 16783..17067 | - | 285 | WP_021013251.1 | hypothetical protein | - |
| KIB02_RS24895 (17372) | 17372..17806 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| KIB02_RS24900 (17900) | 17900..18166 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KIB02_RS24905 (18231) | 18231..19133 | + | 903 | WP_063124010.1 | Recombination-promoting nuclease RpnA | VF |
| KIB02_RS24910 (19195) | 19195..19389 | + | 195 | WP_001496986.1 | hypothetical protein | VF |
| KIB02_RS24915 (19420) | 19420..19671 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| KIB02_RS24925 (20252) | 20252..21100 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| KIB02_RS24930 (21186) | 21186..21521 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| KIB02_RS24935 (21755) | 21755..22087 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| KIB02_RS24940 (22098) | 22098..24797 | + | 2700 | WP_213833233.1 | Protein TraI | Relaxase |
| KIB02_RS24945 (24834) | 24834..27125 | - | 2292 | WP_021513957.1 | F-type conjugative transfer protein TrbC | - |
| KIB02_RS24950 (27118) | 27118..28188 | - | 1071 | WP_213833234.1 | DsbC family protein | - |
| KIB02_RS24955 (28207) | 28207..29415 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| KIB02_RS24960 (29633) | 29633..30586 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (30780) | 30780..30835 | - | 56 | NuclAT_1 | - | - |
| - (30780) | 30780..30835 | - | 56 | NuclAT_1 | - | - |
| - (30780) | 30780..30835 | - | 56 | NuclAT_1 | - | - |
| - (30780) | 30780..30835 | - | 56 | NuclAT_1 | - | - |
| - (31076) | 31076..31133 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31076) | 31076..31133 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31076) | 31076..31133 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31076) | 31076..31133 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| KIB02_RS24965 (31188) | 31188..31340 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| KIB02_RS24970 (31412) | 31412..31663 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KIB02_RS27090 (32162) | 32162..32257 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| KIB02_RS24975 (32322) | 32322..32498 | - | 177 | WP_001054901.1 | hypothetical protein | - |
| KIB02_RS24980 (32830) | 32830..33039 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| KIB02_RS24985 (33111) | 33111..33773 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KIB02_RS24990 (33844) | 33844..36012 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| KIB02_RS24995 (36109) | 36109..36693 | - | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| KIB02_RS25000 (36722) | 36722..37924 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| KIB02_RS25005 (37891) | 37891..38505 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| KIB02_RS25010 (38505) | 38505..41549 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| KIB02_RS25015 (41639) | 41639..42439 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| KIB02_RS25020 (42423) | 42423..42611 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| KIB02_RS25025 (42675) | 42675..43079 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| KIB02_RS25030 (43130) | 43130..43657 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KIB02_RS25035 (43657) | 43657..44361 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| KIB02_RS25040 (44361) | 44361..45650 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| KIB02_RS25045 (45653) | 45653..46636 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| KIB02_RS25050 (46647) | 46647..47339 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| KIB02_RS25055 (47336) | 47336..47683 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KIB02_RS25060 (47701) | 47701..51468 | - | 3768 | WP_077134477.1 | DUF5710 domain-containing protein | - |
| KIB02_RS25065 (51558) | 51558..52109 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| KIB02_RS25070 (52124) | 52124..52414 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| KIB02_RS25075 (52411) | 52411..53559 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| KIB02_RS25080 (53556) | 53556..54374 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| KIB02_RS25085 (54371) | 54371..54829 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KIB02_RS25090 (55224) | 55224..55808 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| KIB02_RS25095 (55868) | 55868..57070 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| KIB02_RS25100 (57156) | 57156..57980 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| KIB02_RS25105 (58131) | 58131..59285 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| KIB02_RS25115 (60918) | 60918..62354 | - | 1437 | WP_015058913.1 | hypothetical protein | VF |
| KIB02_RS25120 (62342) | 62342..62998 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| KIB02_RS25125 (62983) | 62983..63543 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| KIB02_RS25130 (63553) | 63553..64167 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| KIB02_RS25135 (64184) | 64184..65269 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KIB02_RS25140 (65282) | 65282..66835 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KIB02_RS25145 (66846) | 66846..67298 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| KIB02_RS25150 (67285) | 67285..68580 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| KIB02_RS25155 (68573) | 68573..70255 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| KIB02_RS25160 (70269) | 70269..70706 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| KIB02_RS25165 (70706) | 70706..71773 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| KIB02_RS25170 (72525) | 72525..72779 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| KIB02_RS25175 (72951) | 72951..73634 | - | 684 | WP_213833230.1 | conjugal transfer protein TraC | - |
| KIB02_RS25180 (73888) | 73888..74421 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| KIB02_RS25185 (74863) | 74863..75150 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| KIB02_RS25190 (75068) | 75068..75346 | - | 279 | WP_219065241.1 | ash family protein | - |
| KIB02_RS25195 (76304) | 76304..77335 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| KIB02_RS25200 (78239) | 78239..78523 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KIB02_RS25205 (78523) | 78523..78798 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KIB02_RS25210 (78904) | 78904..79107 | + | 204 | Protein_87 | hypothetical protein | - |
| KIB02_RS25215 (79377) | 79377..79643 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| KIB02_RS25220 (79643) | 79643..80137 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| KIB02_RS25225 (80193) | 80193..80795 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| KIB02_RS25230 (81241) | 81241..82440 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KIB02_RS25235 (82450) | 82450..82638 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| KIB02_RS25240 (82837) | 82837..84183 | + | 1347 | WP_001132032.1 | protein YagA | - |
| KIB02_RS25245 (84462) | 84462..86342 | + | 1881 | WP_213833231.1 | colicin Ia central receptor-binding domain-containing protein | - |
| KIB02_RS25250 (86364) | 86364..86699 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| KIB02_RS25255 (86828) | 86828..87175 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| KIB02_RS25260 (87195) | 87195..87785 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| KIB02_RS25265 (87785) | 87785..88039 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| KIB02_RS25270 (88608) | 88608..89021 | + | 414 | WP_021513973.1 | hypothetical protein | - |
| KIB02_RS25275 (89023) | 89023..89802 | + | 780 | WP_001164198.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|