MGE detailed information
MGE type: Conjugative plasmid MGE length: 88195 bp
Accession: NZ_CP075376 Location: 1..88195 Organism: Escherichia coli strain no107 Replicon: plasmid unnamed3
Accession: NZ_CP075376 Location: 1..88195 Organism: Escherichia coli strain no107 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIB02_RS24270 (91) | 91..735 | + | 645 | WP_001144036.1 | ParA family protein | - |
| KIB02_RS24275 (822) | 822..1130 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| KIB02_RS24280 (1544) | 1544..2524 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| KIB02_RS24285 (2517) | 2517..2933 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| KIB02_RS24290 (2935) | 2935..4209 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KIB02_RS24295 (4209) | 4209..4646 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KIB02_RS24300 (4643) | 4643..4891 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KIB02_RS24305 (5309) | 5309..6211 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| KIB02_RS24310 (6215) | 6215..6520 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| KIB02_RS24315 (6596) | 6596..7279 | + | 684 | WP_021513974.1 | DNA methylase | - |
| KIB02_RS24320 (7280) | 7280..7501 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| KIB02_RS24325 (7482) | 7482..7948 | + | 467 | Protein_11 | DUF1380 family protein | - |
| KIB02_RS24330 (7999) | 7999..8769 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| KIB02_RS24335 (9186) | 9186..9611 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KIB02_RS24340 (9658) | 9658..10080 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| KIB02_RS24345 (10077) | 10077..10268 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| KIB02_RS24350 (10406) | 10406..10687 | + | 282 | WP_162713425.1 | hypothetical protein | - |
| KIB02_RS24355 (11039) | 11039..11566 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| KIB02_RS24360 (11624) | 11624..11857 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| KIB02_RS24365 (11916) | 11916..13874 | + | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| KIB02_RS24370 (13929) | 13929..14363 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| KIB02_RS24375 (14360) | 14360..15079 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| KIB02_RS24380 (15076) | 15076..15672 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| KIB02_RS24385 (16135) | 16135..16635 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| KIB02_RS24390 (16775) | 16775..17059 | - | 285 | WP_021013251.1 | hypothetical protein | - |
| KIB02_RS24395 (17364) | 17364..17798 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| KIB02_RS24400 (17892) | 17892..18158 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KIB02_RS24405 (18223) | 18223..19125 | + | 903 | WP_063124010.1 | Recombination-promoting nuclease RpnA | VF |
| KIB02_RS24410 (19187) | 19187..19381 | + | 195 | WP_001496986.1 | hypothetical protein | VF |
| KIB02_RS24415 (19412) | 19412..19663 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| KIB02_RS24425 (20244) | 20244..21092 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| KIB02_RS24430 (21178) | 21178..21513 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| KIB02_RS24435 (21747) | 21747..22079 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| KIB02_RS24440 (22090) | 22090..24789 | + | 2700 | WP_213833233.1 | Protein TraI | Relaxase |
| KIB02_RS24445 (24826) | 24826..27117 | - | 2292 | WP_021513957.1 | F-type conjugative transfer protein TrbC | - |
| KIB02_RS24450 (27110) | 27110..28180 | - | 1071 | WP_213833234.1 | DsbC family protein | - |
| KIB02_RS24455 (28199) | 28199..29407 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| KIB02_RS24460 (29625) | 29625..30578 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (30772) | 30772..30827 | - | 56 | NuclAT_1 | - | - |
| - (30772) | 30772..30827 | - | 56 | NuclAT_1 | - | - |
| - (30772) | 30772..30827 | - | 56 | NuclAT_1 | - | - |
| - (30772) | 30772..30827 | - | 56 | NuclAT_1 | - | - |
| - (31068) | 31068..31125 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31068) | 31068..31125 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31068) | 31068..31125 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (31068) | 31068..31125 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| KIB02_RS24465 (31180) | 31180..31332 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| KIB02_RS24470 (31404) | 31404..31655 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KIB02_RS27085 (32154) | 32154..32249 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| KIB02_RS24475 (32314) | 32314..32490 | - | 177 | WP_001054901.1 | hypothetical protein | - |
| KIB02_RS24480 (32822) | 32822..33031 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| KIB02_RS24485 (33103) | 33103..33765 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KIB02_RS24490 (33836) | 33836..36004 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| KIB02_RS24495 (36101) | 36101..36685 | - | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| KIB02_RS24500 (36714) | 36714..37916 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| KIB02_RS24505 (37883) | 37883..38497 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| KIB02_RS24510 (38497) | 38497..41541 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| KIB02_RS24515 (41631) | 41631..42431 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| KIB02_RS24520 (42415) | 42415..42603 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| KIB02_RS24525 (42667) | 42667..43071 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| KIB02_RS24530 (43122) | 43122..43649 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KIB02_RS24535 (43649) | 43649..44353 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| KIB02_RS24540 (44353) | 44353..45642 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| KIB02_RS24545 (45645) | 45645..46628 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| KIB02_RS24550 (46639) | 46639..47331 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| KIB02_RS24555 (47328) | 47328..47675 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KIB02_RS24560 (47693) | 47693..51460 | - | 3768 | WP_077134477.1 | DUF5710 domain-containing protein | - |
| KIB02_RS24565 (51550) | 51550..52101 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| KIB02_RS24570 (52116) | 52116..52406 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| KIB02_RS24575 (52403) | 52403..53551 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| KIB02_RS24580 (53548) | 53548..54366 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| KIB02_RS24585 (54363) | 54363..54821 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KIB02_RS24590 (55216) | 55216..55800 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| KIB02_RS24595 (55860) | 55860..57062 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| KIB02_RS24600 (57148) | 57148..57972 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| KIB02_RS24605 (58123) | 58123..59277 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| KIB02_RS24610 (60797) | 60797..61045 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| KIB02_RS24615 (61042) | 61042..62334 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| KIB02_RS24620 (62334) | 62334..62990 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| KIB02_RS24625 (62975) | 62975..63535 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| KIB02_RS24630 (63545) | 63545..64159 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| KIB02_RS24635 (64176) | 64176..65261 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KIB02_RS24640 (65274) | 65274..66827 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KIB02_RS24645 (66838) | 66838..67290 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| KIB02_RS24650 (67277) | 67277..68572 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| KIB02_RS24655 (68565) | 68565..70247 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| KIB02_RS24660 (70261) | 70261..70698 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| KIB02_RS24665 (70698) | 70698..71765 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| KIB02_RS24670 (72517) | 72517..72771 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| KIB02_RS24675 (72943) | 72943..73626 | - | 684 | WP_213833230.1 | conjugal transfer protein TraC | - |
| KIB02_RS24680 (73880) | 73880..74413 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| KIB02_RS24685 (74855) | 74855..75142 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| KIB02_RS24690 (75060) | 75060..75338 | - | 279 | WP_219065241.1 | ash family protein | - |
| KIB02_RS24695 (76296) | 76296..77327 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| KIB02_RS24700 (78231) | 78231..78515 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KIB02_RS24705 (78515) | 78515..78790 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KIB02_RS24710 (78896) | 78896..79099 | + | 204 | Protein_88 | hypothetical protein | - |
| KIB02_RS24715 (79369) | 79369..79635 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| KIB02_RS24720 (79635) | 79635..80129 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| KIB02_RS24725 (80185) | 80185..80787 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| KIB02_RS24730 (81141) | 81141..82487 | + | 1347 | WP_001132032.1 | protein YagA | - |
| KIB02_RS24735 (82766) | 82766..84646 | + | 1881 | WP_213833231.1 | colicin Ia central receptor-binding domain-containing protein | - |
| KIB02_RS24740 (84668) | 84668..85003 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| KIB02_RS24745 (85132) | 85132..85479 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| KIB02_RS24750 (85499) | 85499..86089 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| KIB02_RS24755 (86089) | 86089..86343 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| KIB02_RS24760 (86912) | 86912..87325 | + | 414 | WP_021513973.1 | hypothetical protein | - |
| KIB02_RS24765 (87327) | 87327..88106 | + | 780 | WP_001164198.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|