MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP075325 Location: 2885949..2912469 Organism: Xanthomonas citri pv. citri strain GD82 Replicon: chromosome
Accession: NZ_CP075325 Location: 2885949..2912469 Organism: Xanthomonas citri pv. citri strain GD82 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJA71_RS12775 (KJA71_12775) | 2882871..2883047 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| KJA71_RS12780 (KJA71_12780) | 2883267..2883668 | + | 402 | WP_194163853.1 | H-NS family nucleoid-associated regulatory protein | - |
| KJA71_RS12790 (KJA71_12790) | 2883957..2885048 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| KJA71_RS12795 (KJA71_12795) | 2885988..2888120 | + | 2133 | WP_234336958.1 | DotA/TraY family protein | - |
| KJA71_RS12800 (KJA71_12800) | 2888130..2888651 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| KJA71_RS12805 (KJA71_12805) | 2889516..2890472 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| KJA71_RS12810 (KJA71_12810) | 2890539..2891672 | - | 1134 | Protein_2512 | IS5 family transposase ISXo4 | Transposase |
| KJA71_RS12820 (KJA71_12820) | 2893012..2893266 | - | 255 | WP_223293127.1 | hypothetical protein | - |
| KJA71_RS24750 | 2893335..2893469 | - | 135 | WP_011051575.1 | hypothetical protein | - |
| KJA71_RS12825 (KJA71_12825) | 2893462..2893776 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| KJA71_RS12830 (KJA71_12830) | 2893779..2894030 | - | 252 | WP_230598886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KJA71_RS12835 (KJA71_12835) | 2894057..2894335 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| KJA71_RS12840 (KJA71_12840) | 2894505..2895773 | - | 1269 | Protein_2519 | Tn3 family transposase ISPsy42 | Transposase |
| KJA71_RS12845 (KJA71_12845) | 2895822..2897047 | + | 1226 | Protein_2520 | IS3 family transposase ISJsp1 | Transposase |
| KJA71_RS12850 (KJA71_12850) | 2897683..2898390 | + | 708 | Protein_2521 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KJA71_RS12855 (KJA71_12855) | 2898811..2900919 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| KJA71_RS12860 (KJA71_12860) | 2900991..2901158 | + | 168 | WP_227893452.1 | plasmid-related protein | - |
| KJA71_RS12865 (KJA71_12865) | 2901155..2902741 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| KJA71_RS12870 (KJA71_12870) | 2902738..2903655 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| KJA71_RS12875 (KJA71_12875) | 2903664..2903993 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| KJA71_RS12880 (KJA71_12880) | 2904100..2904507 | + | 408 | Protein_2527 | plasmid pRiA4b ORF-3 family protein | - |
| KJA71_RS24755 (KJA71_12890) | 2904899..2905030 | - | 132 | WP_108722281.1 | hypothetical protein | - |
| KJA71_RS12895 (KJA71_12895) | 2905660..2905920 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| KJA71_RS12900 (KJA71_12900) | 2906319..2907320 | - | 1002 | WP_011051588.1 | replication protein RepA | - |
| KJA71_RS12905 (KJA71_12905) | 2907553..2907786 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| KJA71_RS12910 (KJA71_12910) | 2908365..2909759 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| KJA71_RS12915 (KJA71_12915) | 2909756..2911873 | + | 2118 | WP_011051591.1 | ATP-binding protein | - |
| KJA71_RS12920 (KJA71_12920) | 2912293..2912469 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| KJA71_RS12925 (KJA71_12925) | 2912752..2913858 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| KJA71_RS12930 (KJA71_12930) | 2913901..2914410 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| KJA71_RS12935 (KJA71_12935) | 2914422..2916080 | - | 1659 | WP_011051595.1 | methyl-accepting chemotaxis protein | - |
| KJA71_RS12940 (KJA71_12940) | 2916376..2916996 | + | 621 | WP_011051596.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |