MGE detailed information
MGE type: Genomic_island MGE length: 40310 bp
Accession: NZ_CP075112 Location: 4070225..4110534 Organism: Salmonella enterica subsp. enterica serovar Corvallis strain CFSAN059903 Replicon: chromosome
Accession: NZ_CP075112 Location: 4070225..4110534 Organism: Salmonella enterica subsp. enterica serovar Corvallis strain CFSAN059903 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCO42_RS19430 (4065492) | 4065492..4066022 | - | 531 | WP_000907671.1 | Hcp family type VI secretion system effector | - |
| CCO42_RS19435 (4066740) | 4066740..4067753 | + | 1014 | WP_001094611.1 | tryptophan--tRNA ligase | - |
| CCO42_RS19440 (4067754) | 4067754..4068527 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
| CCO42_RS19445 (4068877) | 4068877..4069542 | + | 666 | WP_094963800.1 | dienelactone hydrolase family protein | - |
| CCO42_RS19450 (4069559) | 4069559..4070020 | - | 462 | WP_094963801.1 | DUF302 domain-containing protein | - |
| CCO42_RS19455 (4070225) | 4070225..4071136 | - | 912 | WP_094963802.1 | hypothetical protein | - |
| CCO42_RS19460 (4071412) | 4071412..4072407 | - | 996 | WP_076736173.1 | hypothetical protein | - |
| CCO42_RS19465 (4072659) | 4072659..4073267 | - | 609 | WP_039590215.1 | DUF1062 domain-containing protein | - |
| CCO42_RS19470 (4073755) | 4073755..4074012 | + | 258 | WP_001054381.1 | YjhX family toxin | - |
| CCO42_RS19475 (4074017) | 4074017..4075648 | + | 1632 | WP_094963803.1 | class I SAM-dependent methyltransferase | - |
| CCO42_RS19480 (4076208) | 4076208..4076924 | + | 717 | WP_000532939.1 | putative transcriptional regulatory protein YeeN | VF |
| CCO42_RS23100 (4077336) | 4077336..4077662 | + | 327 | WP_223229619.1 | DeoR family transcriptional regulator | - |
| CCO42_RS19490 (4077779) | 4077779..4078993 | + | 1215 | WP_162847637.1 | type II restriction endonuclease | - |
| CCO42_RS19495 (4079036) | 4079036..4080460 | - | 1425 | WP_063809725.1 | DNA cytosine methyltransferase | - |
| CCO42_RS19500 (4080753) | 4080753..4083640 | - | 2888 | Protein_3829 | AAA domain-containing protein | - |
| CCO42_RS23105 (4084009) | 4084009..4084283 | - | 275 | Protein_3830 | Arm DNA-binding domain-containing protein | - |
| CCO42_RS19510 (4084718) | 4084718..4085026 | - | 309 | WP_020898325.1 | CcdB family protein | Toxin Detail |
| CCO42_RS19515 (4085029) | 4085029..4085268 | - | 240 | WP_000016244.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| CCO42_RS19520 (4085381) | 4085381..4085629 | - | 249 | WP_020898324.1 | ribbon-helix-helix protein, CopG family | - |
| CCO42_RS19525 (4085694) | 4085694..4086527 | - | 834 | WP_063808974.1 | DUF4942 domain-containing protein | - |
| CCO42_RS19530 (4086643) | 4086643..4086987 | - | 345 | WP_020898322.1 | TA system toxin CbtA family protein | Toxin Detail |
| CCO42_RS19535 (4087002) | 4087002..4087331 | - | 330 | WP_020898321.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CCO42_RS19540 (4087394) | 4087394..4087894 | - | 501 | WP_020898320.1 | DNA repair protein RadC | - |
| CCO42_RS19545 (4087907) | 4087907..4088725 | - | 819 | WP_020898319.1 | DUF932 domain-containing protein | - |
| CCO42_RS19550 (4088827) | 4088827..4089072 | - | 246 | WP_020898318.1 | DUF905 domain-containing protein | - |
| CCO42_RS19555 (4089161) | 4089161..4089607 | - | 447 | WP_020898317.1 | IrmA family protein | - |
| CCO42_RS19560 (4089718) | 4089718..4092828 | - | 3111 | WP_020898316.1 | Ag43/Cah family autotransporter adhesin | - |
| CCO42_RS19565 (4092905) | 4092905..4093591 | - | 687 | WP_020898315.1 | WYL domain-containing protein | - |
| CCO42_RS19570 (4093972) | 4093972..4094265 | - | 294 | WP_094963978.1 | hypothetical protein | - |
| CCO42_RS19575 (4094371) | 4094371..4095330 | - | 960 | WP_094963979.1 | hypothetical protein | - |
| CCO42_RS19580 (4095833) | 4095833..4096468 | + | 636 | WP_094963980.1 | inovirus Gp2 family protein | - |
| CCO42_RS19585 (4096573) | 4096573..4096779 | + | 207 | WP_001620335.1 | AlpA family phage regulatory protein | - |
| CCO42_RS19590 (4096866) | 4096866..4097441 | + | 576 | WP_094963981.1 | hypothetical protein | - |
| CCO42_RS19595 (4097596) | 4097596..4098117 | + | 522 | WP_094963982.1 | malate transporter | - |
| CCO42_RS19600 (4098157) | 4098157..4099194 | - | 1038 | WP_254879423.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CCO42_RS19605 (4099347) | 4099347..4101056 | + | 1710 | WP_094963984.1 | class I SAM-dependent DNA methyltransferase | - |
| CCO42_RS19610 (4101046) | 4101046..4102500 | + | 1455 | WP_094963985.1 | restriction endonuclease subunit S | - |
| CCO42_RS19615 (4102500) | 4102500..4105631 | + | 3132 | WP_094963986.1 | type I restriction endonuclease subunit R | - |
| CCO42_RS19620 (4105677) | 4105677..4108133 | + | 2457 | WP_020898303.1 | AAA family ATPase | - |
| CCO42_RS19625 (4108598) | 4108598..4109530 | - | 933 | WP_094963987.1 | S-4TM family putative pore-forming effector | - |
| CCO42_RS19630 (4109530) | 4109530..4110534 | - | 1005 | WP_020898301.1 | hypothetical protein | - |
| CCO42_RS19635 (4110869) | 4110869..4111744 | - | 876 | WP_094963988.1 | HNH endonuclease | - |
| CCO42_RS19640 (4111961) | 4111961..4113229 | - | 1269 | WP_020898299.1 | integrase arm-type DNA-binding domain-containing protein | - |
| CCO42_RS19650 (4113736) | 4113736..4114755 | + | 1020 | WP_000152563.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| CCO42_RS19655 (4114783) | 4114783..4115313 | - | 531 | WP_000896756.1 | gluconokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|