MGE detailed information
MGE type: Conjugative plasmid MGE length: 101510 bp
Accession: NZ_CP075111 Location: 1..101510 Organism: Salmonella enterica strain CFSAN060804 Replicon: plasmid pCFSAN060804
Accession: NZ_CP075111 Location: 1..101510 Organism: Salmonella enterica strain CFSAN060804 Replicon: plasmid pCFSAN060804
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC27_RS23565 (1) | 1..741 | + | 741 | WP_023972262.1 | type-F conjugative transfer system secretin TraK | - |
| CIC27_RS23570 (728) | 728..2089 | + | 1362 | WP_023972263.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| CIC27_RS23575 (2201) | 2201..2425 | + | 225 | WP_023972264.1 | TraR/DksA C4-type zinc finger protein | - |
| CIC27_RS23580 (2429) | 2429..2614 | + | 186 | WP_031233071.1 | hypothetical protein | - |
| CIC27_RS23585 (2589) | 2589..3071 | + | 483 | WP_228413451.1 | hypothetical protein | - |
| CIC27_RS23590 (3061) | 3061..3525 | + | 465 | WP_023972267.1 | conjugal transfer protein TraP | - |
| CIC27_RS23595 (3525) | 3525..3965 | + | 441 | WP_023972268.1 | hypothetical protein | - |
| CIC27_RS23600 (3984) | 3984..4625 | + | 642 | WP_023972269.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CIC27_RS23605 (4636) | 4636..7227 | + | 2592 | WP_023972270.1 | type IV secretion system protein TraC | - |
| CIC27_RS23610 (7224) | 7224..7673 | + | 450 | WP_023972271.1 | type-F conjugative transfer system protein TrbI | - |
| CIC27_RS23615 (7673) | 7673..8308 | + | 636 | WP_023972272.1 | type-F conjugative transfer system protein TraW | - |
| CIC27_RS23620 (8305) | 8305..9291 | + | 987 | WP_023972273.1 | conjugal transfer pilus assembly protein TraU | - |
| CIC27_RS23625 (9302) | 9302..9670 | + | 369 | WP_023972274.1 | hypothetical protein | - |
| CIC27_RS23630 (9679) | 9679..10281 | + | 603 | WP_023972275.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CIC27_RS23635 (10278) | 10278..12107 | + | 1830 | WP_023972276.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CIC27_RS23640 (12104) | 12104..12880 | + | 777 | WP_023972277.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CIC27_RS23645 (12905) | 12905..13513 | + | 609 | WP_023972278.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CIC27_RS23650 (13516) | 13516..14877 | + | 1362 | WP_031233079.1 | conjugal transfer pilus assembly protein TraH | - |
| CIC27_RS23655 (14879) | 14879..17773 | + | 2895 | WP_023972280.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| CIC27_RS23660 (17780) | 17780..18358 | + | 579 | WP_228413453.1 | conjugal transfer protein TraS | - |
| CIC27_RS23665 (18532) | 18532..19269 | + | 738 | WP_023197467.1 | conjugal transfer complement resistance protein TraT | - |
| CIC27_RS23670 (19419) | 19419..21662 | + | 2244 | WP_023972282.1 | type IV conjugative transfer system coupling protein TraD | - |
| CIC27_RS23675 (21662) | 21662..26947 | + | 5286 | WP_023972283.1 | Multifunctional conjugation protein TraI | Relaxase |
| CIC27_RS23680 (26966) | 26966..27532 | + | 567 | WP_031233080.1 | DUF2726 domain-containing protein | - |
| CIC27_RS23685 (27529) | 27529..28260 | + | 732 | WP_023972285.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CIC27_RS23690 (28429) | 28429..28737 | + | 309 | WP_071790373.1 | phospholipase D-like domain-containing protein | - |
| CIC27_RS23695 (28734) | 28734..28982 | + | 249 | WP_023972287.1 | Phospholipase D | VF |
| CIC27_RS23700 (29113) | 29113..29349 | + | 237 | WP_023972288.1 | replication regulatory protein RepA | - |
| CIC27_RS24430 (29469) | 29469..29644 | + | 176 | Protein_29 | protein CopA/IncA | - |
| CIC27_RS23710 (29663) | 29663..30214 | + | 552 | WP_031233082.1 | plasmid replication initiator RepA | - |
| CIC27_RS23715 (30207) | 30207..30893 | + | 687 | WP_023972290.1 | plasmid replication initiator RepA | - |
| CIC27_RS23720 (31875) | 31875..32033 | + | 159 | WP_023972292.1 | hypothetical protein | - |
| CIC27_RS23725 (32182) | 32182..32571 | - | 390 | WP_023972293.1 | cytochrome b562 | - |
| CIC27_RS23730 (32931) | 32931..33690 | - | 760 | Protein_34 | IS110 family transposase ISEc11 | Transposase |
| CIC27_RS23735 (34239) | 34239..34745 | + | 507 | WP_031619420.1 | superoxide dismutase family protein | - |
| CIC27_RS23740 (35464) | 35464..36006 | + | 543 | WP_220572055.1 | Regulatory protein SoxS | VF |
| CIC27_RS23745 (36500) | 36500..36706 | + | 207 | WP_023972121.1 | ANR family transcriptional regulator | - |
| CIC27_RS23750 (37072) | 37072..41007 | + | 3936 | WP_085379671.1 | Serine protease EspC | VF |
| CIC27_RS23755 (41074) | 41074..42036 | - | 963 | Protein_39 | ISNCY family transposase ISKpn21 | Transposase |
| CIC27_RS23760 (42382) | 42382..43206 | + | 825 | WP_070812938.1 | CFA/I fimbrial subunit D | VF |
| CIC27_RS23765 (43351) | 43351..47103 | - | 3753 | WP_220572056.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| CIC27_RS23770 (48669) | 48669..48670 | - | 2 | WP_097377577.1 | IS3 family transposase ISYpe1 | Transposase |
| CIC27_RS23775 (49846) | 49846..50460 | + | 615 | WP_023972137.1 | hypothetical protein | - |
| CIC27_RS24435 (51345) | 51345..54233 | - | 2889 | WP_259401880.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| CIC27_RS23795 (55798) | 55798..55799 | - | 2 | WP_097377577.1 | IS3 family transposase ISYpe1 | Transposase |
| CIC27_RS23800 (56975) | 56975..57589 | + | 615 | WP_023972137.1 | hypothetical protein | - |
| CIC27_RS24440 (57846) | 57846..58523 | + | 678 | Protein_47 | IgA-specific serine endopeptidase autotransporter | VF |
| CIC27_RS24445 (58690) | 58690..58921 | + | 232 | Protein_48 | IgA-specific serine endopeptidase autotransporter | VF |
| CIC27_RS23810 (59122) | 59122..60012 | - | 891 | WP_023972478.1 | hypothetical protein | - |
| CIC27_RS23815 (60027) | 60027..62537 | - | 2511 | WP_023972477.1 | Outer membrane usher protein SfmD | VF |
| CIC27_RS23820 (62548) | 62548..63261 | - | 714 | WP_023972476.1 | putative fimbrial chaperone YraI | VF |
| CIC27_RS23825 (63305) | 63305..63889 | - | 585 | WP_140439383.1 | hypothetical protein | - |
| CIC27_RS23830 (64681) | 64681..65421 | + | 741 | WP_023972474.1 | site-specific integrase | - |
| CIC27_RS23835 (65727) | 65727..66719 | - | 993 | WP_077913714.1 | RepB family plasmid replication initiator protein | - |
| CIC27_RS23840 (67464) | 67464..67832 | - | 369 | Protein_55 | DUF302 domain-containing protein | - |
| CIC27_RS23845 (68046) | 68046..68288 | + | 243 | WP_023972461.1 | YjhX family toxin | - |
| CIC27_RS23850 (68299) | 68299..68846 | + | 548 | Protein_57 | N-acetyltransferase | - |
| CIC27_RS23855 (68932) | 68932..69195 | - | 264 | WP_023972459.1 | hypothetical protein | - |
| CIC27_RS23860 (69192) | 69192..69482 | - | 291 | WP_023972458.1 | hypothetical protein | - |
| CIC27_RS23865 (69507) | 69507..70019 | - | 513 | WP_023972457.1 | hypothetical protein | - |
| CIC27_RS23870 (70396) | 70396..71010 | - | 615 | WP_023972455.1 | DNA-binding protein | - |
| CIC27_RS23875 (71271) | 71271..72149 | + | 879 | WP_023972454.1 | restriction endonuclease | - |
| CIC27_RS23880 (72190) | 72190..72618 | - | 429 | WP_023972453.1 | PIN domain-containing protein | Toxin Detail |
| CIC27_RS23885 (72615) | 72615..72845 | - | 231 | WP_023972452.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| CIC27_RS23890 (73420) | 73420..73734 | + | 315 | WP_139148288.1 | hypothetical protein | - |
| CIC27_RS23895 (73778) | 73778..74485 | + | 708 | WP_023972450.1 | hypothetical protein | - |
| CIC27_RS23900 (74482) | 74482..75258 | + | 777 | Protein_67 | site-specific integrase | - |
| CIC27_RS24450 (75274) | 75274..75369 | + | 96 | Protein_68 | malate dehydrogenase | - |
| CIC27_RS23905 (75579) | 75579..76040 | + | 462 | WP_023972447.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CIC27_RS23910 (76040) | 76040..76615 | + | 576 | WP_031233190.1 | PIN domain-containing protein | Toxin Detail |
| CIC27_RS23915 (77296) | 77296..78162 | + | 867 | WP_023972445.1 | AAA family ATPase | - |
| CIC27_RS23920 (78162) | 78162..79193 | + | 1032 | WP_023972444.1 | ParB/RepB/Spo0J family partition protein | - |
| CIC27_RS23925 (79193) | 79193..79630 | + | 438 | WP_000843283.1 | hypothetical protein | - |
| CIC27_RS23930 (79627) | 79627..79950 | + | 324 | WP_023972443.1 | hypothetical protein | - |
| CIC27_RS23935 (80000) | 80000..81373 | + | 1374 | WP_023972442.1 | RES family NAD+ phosphorylase | - |
| CIC27_RS23940 (81422) | 81422..82696 | - | 1275 | WP_023972441.1 | Y-family DNA polymerase | - |
| CIC27_RS23945 (82696) | 82696..83118 | - | 423 | WP_023972440.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CIC27_RS23950 (83298) | 83298..83972 | - | 675 | WP_031233189.1 | SOS response-associated peptidase family protein | - |
| CIC27_RS23955 (84332) | 84332..85009 | + | 678 | WP_023972438.1 | DNA methylase | - |
| CIC27_RS23960 (85009) | 85009..85230 | + | 222 | WP_023972437.1 | hypothetical protein | - |
| CIC27_RS23965 (85241) | 85241..85660 | + | 420 | WP_023972436.1 | DUF1380 family protein | - |
| CIC27_RS23970 (85714) | 85714..86493 | + | 780 | WP_023972435.1 | hypothetical protein | - |
| CIC27_RS23975 (86559) | 86559..86762 | - | 204 | WP_023972434.1 | hypothetical protein | - |
| CIC27_RS23980 (86899) | 86899..87405 | + | 507 | WP_023972433.1 | antirestriction protein ArdA | - |
| CIC27_RS23985 (87448) | 87448..87639 | + | 192 | WP_023972432.1 | hypothetical protein | - |
| CIC27_RS23990 (87832) | 87832..87900 | + | 69 | Protein_86 | DNA polymerase III subunit theta | - |
| CIC27_RS23995 (87966) | 87966..88283 | + | 318 | WP_023971998.1 | hypothetical protein | - |
| CIC27_RS24000 (88424) | 88424..88645 | - | 222 | WP_170918445.1 | hypothetical protein | - |
| CIC27_RS24005 (88976) | 88976..89530 | + | 555 | WP_023972000.1 | single-stranded DNA-binding protein | - |
| CIC27_RS24010 (89583) | 89583..89825 | + | 243 | WP_023972001.1 | DUF905 domain-containing protein | - |
| CIC27_RS24015 (89896) | 89896..91905 | + | 2010 | WP_023972002.1 | ParB/RepB/Spo0J family partition protein | - |
| CIC27_RS24020 (91945) | 91945..92378 | + | 434 | Protein_92 | conjugation system SOS inhibitor PsiB | - |
| CIC27_RS24025 (92375) | 92375..93102 | + | 728 | Protein_93 | plasmid SOS inhibition protein A | - |
| CIC27_RS24030 (93099) | 93099..93326 | + | 228 | WP_023972005.1 | hypothetical protein | - |
| - (93378) | 93378..93502 | + | 125 | NuclAT_0 | - | - |
| - (93378) | 93378..93502 | + | 125 | NuclAT_0 | - | - |
| - (93378) | 93378..93502 | + | 125 | NuclAT_0 | - | - |
| - (93378) | 93378..93502 | + | 125 | NuclAT_0 | - | - |
| CIC27_RS24455 (93488) | 93488..93637 | + | 150 | Protein_95 | FlmC family protein | - |
| CIC27_RS24035 (93588) | 93588..93704 | + | 117 | WP_233791142.1 | type I toxin-antitoxin system Hok family toxin | - |
| CIC27_RS24040 (94548) | 94548..94952 | + | 405 | WP_023972007.1 | hypothetical protein | - |
| CIC27_RS24045 (95009) | 95009..95356 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| CIC27_RS24050 (95451) | 95451..95597 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| CIC27_RS24055 (95644) | 95644..96477 | + | 834 | WP_070812941.1 | N-6 DNA methylase | - |
| CIC27_RS24060 (97267) | 97267..97653 | + | 387 | WP_023972253.1 | antirestriction protein | - |
| CIC27_RS24065 (97664) | 97664..98119 | - | 456 | WP_023972254.1 | hypothetical protein | VF |
| CIC27_RS24070 (98588) | 98588..98971 | + | 384 | WP_023972255.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CIC27_RS24075 (99271) | 99271..99720 | + | 450 | WP_023972256.1 | helix-turn-helix domain-containing protein | - |
| CIC27_RS24080 (99926) | 99926..100159 | + | 234 | WP_023972258.1 | TraY domain-containing protein | - |
| CIC27_RS24085 (100272) | 100272..100631 | + | 360 | WP_023972259.1 | type IV conjugative transfer system pilin TraA | - |
| CIC27_RS24090 (100633) | 100633..100938 | + | 306 | WP_023972260.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|